##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921362_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2645456 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.039459359747433 33.0 31.0 34.0 28.0 34.0 2 31.180473234104063 33.0 31.0 34.0 28.0 34.0 3 31.25336047925197 34.0 31.0 34.0 28.0 34.0 4 34.745795431865055 37.0 35.0 37.0 32.0 37.0 5 34.451695284291254 37.0 35.0 37.0 31.0 37.0 6 34.403568609721724 37.0 35.0 37.0 31.0 37.0 7 34.25133663156749 37.0 35.0 37.0 30.0 37.0 8 34.20573504152025 37.0 35.0 37.0 30.0 37.0 9 35.786185822028415 39.0 37.0 39.0 30.0 39.0 10-11 35.61656761632021 39.0 37.0 39.0 30.0 39.0 12-13 35.534838984280974 39.0 37.0 39.0 30.0 39.0 14-15 36.723050203821195 40.0 37.0 41.0 30.0 41.0 16-17 36.690413675373925 40.0 37.0 41.0 30.0 41.0 18-19 36.63863545642037 40.0 37.0 41.0 30.0 41.0 20-21 36.59057058594057 40.0 37.0 41.0 30.0 41.0 22-23 36.47845588813422 40.0 37.0 41.0 29.0 41.0 24-25 36.40000287285065 40.0 37.0 41.0 29.0 41.0 26-27 36.25054678664094 40.0 37.0 41.0 28.5 41.0 28-29 36.08950007106525 40.0 36.0 41.0 27.0 41.0 30-31 35.944080151021225 40.0 36.0 41.0 27.0 41.0 32-33 35.89636436969657 40.0 36.0 41.0 27.0 41.0 34-35 36.03306178594541 40.0 36.0 41.0 28.0 41.0 36-37 36.01413366920485 40.0 36.0 41.0 27.5 41.0 38-39 35.92168476814584 40.0 36.0 41.0 27.0 41.0 40-41 35.7927727771696 40.0 36.0 41.0 27.0 41.0 42-43 35.68342546615782 40.0 35.5 41.0 26.0 41.0 44-45 35.54101429016396 40.0 35.0 41.0 26.0 41.0 46-47 35.380873278557644 40.0 35.0 41.0 25.5 41.0 48-49 35.217162939016944 39.5 35.0 41.0 24.5 41.0 50-51 35.052500400687066 39.0 35.0 41.0 24.0 41.0 52-53 34.873022836138645 39.0 35.0 41.0 24.0 41.0 54-55 34.652620569005876 39.0 35.0 41.0 23.0 41.0 56-57 34.38780270773734 38.5 34.0 40.5 22.5 41.0 58-59 34.155117114024954 38.0 34.0 40.0 22.0 41.0 60-61 33.87042422932001 37.5 34.0 40.0 21.5 41.0 62-63 33.567287076405734 37.0 34.0 40.0 20.5 41.0 64-65 33.25535049533993 36.5 33.5 39.5 20.0 41.0 66-67 32.919217707646624 36.0 33.0 39.0 18.5 41.0 68-69 32.56177781826649 35.5 33.0 39.0 17.5 40.5 70-71 32.1879197764015 35.0 33.0 38.0 14.0 40.0 72-73 31.804274385965975 35.0 32.0 37.0 11.5 39.5 74-75 31.40764635662056 35.0 32.0 37.0 7.5 39.0 76-77 28.718054278733042 32.0 27.5 34.5 4.5 36.5 78-79 30.35967447578036 34.5 31.0 35.5 3.5 37.0 80-81 30.573655354691212 35.0 31.5 35.0 2.0 37.0 82-83 30.427513441917007 35.0 32.0 35.0 2.0 37.0 84-85 30.21124751271614 35.0 31.5 35.0 2.0 36.0 86-87 29.975654669743136 35.0 31.0 35.0 2.0 36.0 88-89 29.70704842567784 34.0 31.0 35.0 2.0 35.5 90-91 29.525391841708952 34.0 31.0 35.0 2.0 35.0 92-93 29.376370463164008 34.0 31.0 35.0 2.0 35.0 94-95 29.280343351013965 34.0 31.0 35.0 2.0 35.0 96-97 29.090289915991796 34.0 31.0 35.0 2.0 35.0 98-99 28.82446126490102 34.0 30.5 35.0 2.0 35.0 100-101 27.72691191991097 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 68823.0 3 21875.0 4 11653.0 5 8032.0 6 7013.0 7 6701.0 8 6913.0 9 7394.0 10 8116.0 11 8584.0 12 8967.0 13 9468.0 14 10285.0 15 10981.0 16 11629.0 17 12465.0 18 11549.0 19 10308.0 20 9787.0 21 9863.0 22 10463.0 23 11806.0 24 13906.0 25 16744.0 26 20256.0 27 24403.0 28 29073.0 29 35060.0 30 42878.0 31 53033.0 32 67963.0 33 90154.0 34 132513.0 35 196610.0 36 342834.0 37 637031.0 38 594641.0 39 65682.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.38743099569092 19.484121817020103 13.567201036843683 26.56124615044529 2 14.964040035653777 20.815727579739036 37.06722732911929 27.153005055487895 3 18.103756235032613 24.389236145894564 28.542849960401988 28.964157658670832 4 13.39210582223395 16.418292984423186 34.100278905336246 36.08932228800661 5 14.455281202205834 37.363548541385846 33.58258926461497 14.598580991793344 6 34.79112217256831 34.566923538097136 16.32200836010285 14.319945929231706 7 29.746916786305867 31.593102733973073 19.95147146765735 18.708509012063715 8 27.476705958488996 35.2008509805063 18.774039197571348 18.548403863433354 9 27.151689538589945 15.419080869233886 18.632402126514293 38.79682746566188 10-11 26.517256565849184 25.141071073184428 26.72278105814845 21.618891302817943 12-13 26.607527445682734 22.24695019094087 27.03397622901942 24.111546134356978 14-15 23.758947622891778 23.882939925540352 24.141736054787966 28.216376396779907 16-17 24.24393856175105 27.141929945457356 24.837466399894463 23.776665092897133 18-19 24.276441489433083 26.523413128846347 26.125994845110444 23.07415053661013 20-21 24.668296392954804 25.544957840566045 26.273590647130113 23.513155119349037 22-23 24.53296742239749 25.273388957087683 25.982076790265555 24.211566830249268 24-25 24.361132190659077 25.51592810545843 25.90395979439802 24.218979909484474 26-27 24.047964303103065 25.84551051945578 25.94887925533684 24.157645922104315 28-29 24.12351698567415 26.1928946867033 25.671155654885215 24.012432672737337 30-31 24.595557837374763 25.70647655651302 25.691694299908924 24.006271306203292 32-33 24.32345682372903 25.705975356361886 25.61936119504103 24.351206624868055 34-35 24.485599974897635 25.893865382514313 25.83228141566758 23.78825322692047 36-37 24.451537155080878 25.835126041462303 25.92031039082738 23.793026412629434 38-39 24.508821657718283 25.835552710418398 25.742921949559044 23.912703682304272 40-41 24.576965248634334 25.680385420216567 25.71419984837376 24.028449482775336 42-43 24.327507509732598 25.695231499368298 25.560347402157994 24.41691358874111 44-45 24.18218250875681 25.742842815161577 25.75873937449213 24.316235301589487 46-47 24.371082170203863 25.704214636444107 25.575131696165716 24.349571497186318 48-49 24.104741387376528 25.867878245546983 25.67756720949166 24.349813157584833 50-51 24.287033335506997 25.811320255433923 25.733881096774375 24.1677653122847 52-53 24.557213858883014 25.65579676178495 25.64209377154677 24.144895607785262 54-55 23.93623938072734 25.56191327975154 26.01917422751572 24.4826731120054 56-57 24.126346397893016 25.686793818014525 25.674640182451963 24.512219601640496 58-59 24.186833891825845 25.698033733351078 25.852520172265702 24.26261220255737 60-61 24.40865286017119 25.751813862759793 25.80957772462175 24.029955552447262 62-63 24.322595402242356 25.671733488091615 25.864248757554392 24.14142235211164 64-65 23.95973693638848 25.456783284476053 25.9856141223225 24.597865656812967 66-67 24.047210523579267 25.68897207923881 25.759740597363432 24.504076799818495 68-69 24.025648340508813 25.625049271742377 25.812248808639993 24.537053579108818 70-71 24.01033203410834 25.45251337072308 25.85008983144361 24.687064763724962 72-73 23.924352777881754 25.78243067631124 25.619923298635094 24.673293247171905 74-75 23.829741218781912 25.81136870888427 25.64808733747955 24.71080273485427 76-77 23.814866627328446 25.371883527293498 25.823597439290168 24.989652406087888 78-79 23.709114814021905 25.42800039034634 25.968471211579065 24.89441358405269 80-81 23.959917256679592 25.70827552338138 25.58588893189901 24.74591828804002 82-83 23.86996838474876 25.63440338217402 25.73516234480662 24.7604658882706 84-85 23.790539240097573 25.68710015658151 25.635694080341704 24.886666522979215 86-87 23.615198621312942 25.91626378984972 25.580028179782392 24.888509409054947 88-89 23.448301606066742 25.628170697576678 25.742715152668143 25.18081254368843 90-91 23.608694992757965 25.441915840720714 25.85825705814103 25.091132108380286 92-93 23.675862070269606 25.374995059945316 25.847746474691885 25.10139639509319 94-95 23.587318604450722 25.361902738568133 25.804306013176458 25.24647264380469 96-97 23.282618927455527 25.300420950361126 25.928349598613337 25.488610523570003 98-99 23.085797599217823 25.269280470335726 25.864779235281077 25.78014269516538 100-101 23.127163640184982 25.32011857447534 25.917999596284304 25.634718189055373 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 32.0 2 41.0 3 57.0 4 55.0 5 62.5 6 109.5 7 257.0 8 376.5 9 407.0 10 366.0 11 297.5 12 302.5 13 325.0 14 358.0 15 412.0 16 462.0 17 507.5 18 580.0 19 635.5 20 703.5 21 843.0 22 1022.0 23 1245.0 24 1509.0 25 1916.0 26 2638.5 27 3871.5 28 5647.0 29 8098.5 30 11614.0 31 16185.5 32 22115.0 33 26700.5 34 30399.5 35 35102.5 36 41488.0 37 48557.0 38 54804.0 39 60944.5 40 66039.0 41 71205.0 42 76813.5 43 83005.0 44 89668.0 45 96373.0 46 102316.5 47 107694.5 48 112615.0 49 116110.5 50 117513.0 51 118016.0 52 118138.5 53 117046.5 54 115104.0 55 109932.0 56 102265.5 57 93234.5 58 83738.0 59 73379.5 60 61815.5 61 51849.0 62 42685.5 63 33224.5 64 24421.5 65 17970.5 66 13963.0 67 11127.5 68 8778.0 69 6930.0 70 5429.0 71 4096.5 72 3030.0 73 2391.5 74 1940.0 75 1519.0 76 1115.5 77 695.5 78 412.0 79 265.0 80 186.5 81 121.0 82 71.0 83 45.5 84 28.5 85 15.5 86 12.0 87 14.0 88 10.5 89 2.5 90 2.5 91 3.0 92 3.0 93 2.5 94 1.5 95 0.5 96 0.5 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1357799940728555 2 5.292093310189245E-4 3 0.004573880646663562 4 0.004309275981154099 5 0.02460823389237999 6 0.0012852226610459597 7 7.56013330027035E-5 8 0.0013986246605500149 9 0.0 10-11 0.09306524092632801 12-13 1.3230233275473113E-4 14-15 0.004932986978426404 16-17 1.1340199950405527E-4 18-19 2.4570433225878637E-4 20-21 8.316146630297385E-4 22-23 1.3230233275473113E-4 24-25 0.0020223356578223184 26-27 0.002721647988097326 28-29 0.006350511972227094 30-31 0.014855661935031237 32-33 0.014817861268529887 34-35 0.010848791285887954 36-37 6.426113305229798E-4 38-39 2.4570433225878637E-4 40-41 0.005121990310933163 42-43 0.008391747963300089 44-45 0.008675252962060226 46-47 0.009733671624098075 48-49 0.011812708281672423 50-51 0.005802402307957494 52-53 0.0018144319920648843 54-55 0.0011340199950405526 56-57 0.005934704640712225 58-59 0.00907215996032442 60-61 0.007692435633025081 62-63 0.017804113922136676 64-65 0.03207386552639696 66-67 0.034719912181491584 68-69 0.025874556220175277 70-71 0.040030905824931504 72-73 0.024683835225382696 74-75 0.024003423228358363 76-77 0.22504626801579763 78-79 0.062371099727230386 80-81 0.05199481677260933 82-83 0.020034353245716428 84-85 0.031261151196617896 86-87 0.07830408065755015 88-89 0.25487099388536416 90-91 0.30527818266491674 92-93 0.04742093612594577 94-95 0.004989687978178431 96-97 0.009487967291839289 98-99 0.0010017176622858215 100-101 0.0011340199950405526 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2645456.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.15516327087699 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58457421719189 45.89528155119459 2 12.243898719851531 14.48579655689798 3 4.121370513271195 7.314010368370069 4 1.8918431917296672 4.4764917155866195 5 1.0783057682618744 3.1893676888729816 6 0.6692330928982714 2.375315572600274 7 0.45799918888582547 1.8965111757529165 8 0.3177276114718558 1.5036182985826718 9 0.25141208659937403 1.338509072795205 >10 1.3183084301676868 13.55452510748708 >50 0.051089461095573795 2.0472545209460313 >100 0.013082230100653033 1.3757340168829497 >500 9.62907062273878E-4 0.41699194116702365 >1k 1.925814124516754E-4 0.13059241286371648 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.780066650135175E-5 2 0.0 0.0 0.0 0.0 3.780066650135175E-5 3 0.0 0.0 0.0 0.0 7.56013330027035E-5 4 0.0 0.0 0.0 0.0 7.56013330027035E-5 5 0.0 0.0 0.0 0.0 7.56013330027035E-5 6 0.0 0.0 0.0 0.0 7.56013330027035E-5 7 0.0 0.0 0.0 0.0 7.56013330027035E-5 8 0.0 0.0 0.0 0.0 7.56013330027035E-5 9 0.0 0.0 0.0 0.0 7.56013330027035E-5 10-11 0.0 0.0 0.0 0.0 7.56013330027035E-5 12-13 0.0 0.0 0.0 3.780066650135175E-5 7.56013330027035E-5 14-15 0.0 0.0 0.0 3.780066650135175E-5 7.56013330027035E-5 16-17 0.0 0.0 0.0 3.780066650135175E-5 7.56013330027035E-5 18-19 0.0 0.0 0.0 3.780066650135175E-5 7.56013330027035E-5 20-21 0.0 0.0 0.0 3.780066650135175E-5 1.1340199950405525E-4 22-23 0.0 0.0 0.0 3.780066650135175E-5 1.1340199950405525E-4 24-25 0.0 0.0 0.0 1.3230233275473113E-4 1.1340199950405525E-4 26-27 0.0 0.0 0.0 2.6460466550946225E-4 1.51202666005407E-4 28-29 0.0 0.0 0.0 0.001682129659310153 1.51202666005407E-4 30-31 0.0 0.0 0.0 0.0076546349665237295 1.51202666005407E-4 32-33 0.0 0.0 0.0 0.019505143914697504 1.51202666005407E-4 34-35 0.0 0.0 0.0 0.03538142384526524 1.51202666005407E-4 36-37 0.0 0.0 0.0 0.06187969106271282 1.51202666005407E-4 38-39 0.0 3.780066650135175E-5 0.0 0.10489684954125111 1.8900333250675876E-4 40-41 0.0 3.780066650135175E-5 0.0 0.15604115131758003 1.8900333250675876E-4 42-43 0.0 3.780066650135175E-5 0.0 0.2089431840862218 1.8900333250675876E-4 44-45 0.0 3.780066650135175E-5 0.0 0.2745462407993178 1.8900333250675876E-4 46-47 0.0 3.780066650135175E-5 0.0 0.34978846747025844 1.8900333250675876E-4 48-49 0.0 3.780066650135175E-5 0.0 0.43650319642435936 1.8900333250675876E-4 50-51 0.0 3.780066650135175E-5 0.0 0.5281698126901373 1.8900333250675876E-4 52-53 0.0 3.780066650135175E-5 0.0 0.6245993129350856 1.8900333250675876E-4 54-55 0.0 3.780066650135175E-5 0.0 0.7400614487634647 1.8900333250675876E-4 56-57 0.0 3.780066650135175E-5 0.0 0.8706060505258829 1.8900333250675876E-4 58-59 0.0 3.780066650135175E-5 0.0 1.0189925668769393 1.8900333250675876E-4 60-61 0.0 3.780066650135175E-5 0.0 1.1767158478538293 1.8900333250675876E-4 62-63 0.0 3.780066650135175E-5 0.0 1.3460628337798852 1.8900333250675876E-4 64-65 0.0 3.780066650135175E-5 0.0 1.5252757936627939 1.8900333250675876E-4 66-67 0.0 3.780066650135175E-5 0.0 1.7415145063837767 1.8900333250675876E-4 68-69 0.0 3.780066650135175E-5 0.0 1.9776930706842224 1.8900333250675876E-4 70-71 0.0 3.780066650135175E-5 0.0 2.2350022075589235 1.8900333250675876E-4 72-73 0.0 3.780066650135175E-5 0.0 2.5027821290544994 2.268039990081105E-4 74-75 0.0 3.780066650135175E-5 0.0 2.789311181134746 2.4570433225878637E-4 76-77 0.0 3.780066650135175E-5 0.0 3.116475949703945 2.8350499876013814E-4 78-79 0.0 3.780066650135175E-5 0.0 3.4838795277638335 3.02405332010814E-4 80-81 0.0 3.780066650135175E-5 0.0 3.8698054324093842 3.02405332010814E-4 82-83 0.0 3.780066650135175E-5 0.0 4.2714942149859985 3.4020599851216575E-4 84-85 0.0 3.780066650135175E-5 0.0 4.689607387157451 3.4020599851216575E-4 86-87 0.0 3.780066650135175E-5 0.0 5.139340816857283 3.5910633176284163E-4 88-89 0.0 3.780066650135175E-5 0.0 5.637610302344851 3.780066650135175E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1940 0.0 53.63638 1 GTATCAA 3745 0.0 46.054478 1 TCAACGC 4905 0.0 33.86452 4 CAACGCA 4970 0.0 33.37725 5 ATCAACG 5165 0.0 32.25171 3 TATCAAC 5370 0.0 31.197252 2 AACGCAG 5395 0.0 31.010448 6 GTACATG 9020 0.0 26.390537 1 TACATGG 9035 0.0 25.738537 2 ACATGGG 9520 0.0 23.878908 3 ACGCAGA 7040 0.0 23.358883 7 CGCAGAG 7205 0.0 22.75798 8 CATGGGG 8210 0.0 21.792852 4 ATGGGGG 5235 0.0 20.973783 5 CGTATAC 235 1.1437078E-7 20.195196 3 GCAGAGT 8175 0.0 18.95302 9 AGAGTAC 6845 0.0 18.26265 5 GAGTACA 6945 0.0 17.856047 1 CAGAGTA 7650 0.0 17.370506 4 AGTACAT 6985 0.0 17.189768 2 >>END_MODULE