##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921361_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2922663 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.172659660042914 31.0 31.0 34.0 26.0 34.0 2 30.241330936888723 31.0 31.0 34.0 26.0 34.0 3 30.28379974016847 33.0 31.0 34.0 26.0 34.0 4 33.728575959664184 37.0 35.0 37.0 28.0 37.0 5 33.71657389168713 37.0 35.0 37.0 28.0 37.0 6 33.75233682432768 37.0 35.0 37.0 29.0 37.0 7 33.666505512267406 37.0 35.0 37.0 28.0 37.0 8 33.62942357705969 37.0 35.0 37.0 28.0 37.0 9 35.16658643162075 39.0 35.0 39.0 28.0 39.0 10-11 35.05681667711946 39.0 35.0 39.0 28.0 39.0 12-13 34.93929885176635 39.0 35.0 39.0 27.0 39.0 14-15 36.05425120857245 40.0 36.0 41.0 27.0 41.0 16-17 36.00205018505383 40.0 36.0 41.0 27.0 41.0 18-19 35.94698738787196 40.0 36.0 41.0 27.0 41.0 20-21 35.88548388917915 40.0 36.0 41.0 27.0 41.0 22-23 35.76787436663071 40.0 36.0 41.0 27.0 41.0 24-25 35.66503151406782 40.0 36.0 41.0 26.0 41.0 26-27 35.51653663114769 40.0 36.0 41.0 25.0 41.0 28-29 35.37340654738504 40.0 36.0 41.0 25.0 41.0 30-31 35.23531193983022 39.5 35.0 41.0 24.0 41.0 32-33 35.06690114460682 39.0 35.0 41.0 24.0 41.0 34-35 34.908383381867836 39.0 35.0 41.0 23.5 41.0 36-37 34.74924443906123 39.0 35.0 41.0 23.0 41.0 38-39 34.99187299391001 39.0 35.0 41.0 24.0 41.0 40-41 35.12005147360472 40.0 35.0 41.0 23.5 41.0 42-43 34.97370531600804 40.0 35.0 41.0 22.5 41.0 44-45 34.86231016028875 40.0 35.0 41.0 22.0 41.0 46-47 34.71838439806437 40.0 35.0 41.0 20.5 41.0 48-49 34.5816510490604 39.0 35.0 41.0 19.0 41.0 50-51 32.8855134854754 37.0 32.5 39.5 15.5 40.0 52-53 33.04201938437651 37.5 32.5 39.5 14.5 40.0 54-55 33.90217551595924 39.0 34.0 40.5 14.5 41.0 56-57 33.91780150499733 39.0 34.0 41.0 13.5 41.0 58-59 33.74233618450023 38.0 34.0 41.0 13.0 41.0 60-61 33.502749547245095 38.0 34.0 40.0 9.5 41.0 62-63 33.21727462249325 37.0 33.0 40.0 8.0 41.0 64-65 32.92882621089055 37.0 33.0 40.0 7.0 41.0 66-67 32.58909015510854 36.0 33.0 39.5 2.0 41.0 68-69 32.22739091027601 36.0 32.5 39.0 2.0 41.0 70-71 31.846802898589402 35.0 32.0 39.0 2.0 40.5 72-73 31.49117602679474 35.0 32.0 37.5 2.0 40.0 74-75 31.09625639356984 35.0 32.0 37.0 2.0 39.0 76-77 30.725526685765686 35.0 31.0 36.5 2.0 39.0 78-79 30.386421732509014 35.0 31.0 36.0 2.0 38.5 80-81 30.046364052235923 35.0 31.0 36.0 2.0 37.0 82-83 29.760234929583056 35.0 31.0 35.0 2.0 37.0 84-85 29.529062878614468 35.0 31.0 35.0 2.0 36.5 86-87 29.309590089586106 35.0 30.5 35.0 2.0 36.0 88-89 29.118337625651677 35.0 30.0 35.0 2.0 36.0 90-91 28.876472928969232 34.0 30.0 35.0 2.0 35.5 92-93 28.693387332032465 34.0 30.0 35.0 2.0 35.0 94-95 28.496585990242462 34.0 30.0 35.0 2.0 35.0 96-97 28.25605346904518 34.0 29.5 35.0 2.0 35.0 98-99 28.033599152553684 34.0 29.0 35.0 2.0 35.0 100-101 27.00182864052407 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 117838.0 3 19260.0 4 12952.0 5 9532.0 6 8757.0 7 8778.0 8 9125.0 9 9656.0 10 10285.0 11 11117.0 12 10912.0 13 11092.0 14 11632.0 15 12226.0 16 12363.0 17 12684.0 18 12212.0 19 11638.0 20 11858.0 21 12328.0 22 13435.0 23 15585.0 24 18287.0 25 21524.0 26 26081.0 27 31269.0 28 36492.0 29 43095.0 30 51995.0 31 62879.0 32 78607.0 33 102917.0 34 143387.0 35 207532.0 36 343614.0 37 622398.0 38 654783.0 39 112529.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.80335511494825 18.674200373741428 13.775408033010288 24.74703647830003 2 15.886789520297073 19.558362321326296 39.2815291281829 25.27331903019373 3 19.096476977015012 23.824820336713337 29.1788444725598 27.89985821371185 4 13.705173472678386 15.890279463789936 36.06737749623942 34.33716956729225 5 14.839532332296695 36.847059790059575 33.818824121411495 14.494583756232233 6 33.64832507640666 34.66324777316214 17.26867458788656 14.419752562544637 7 29.147537662579424 31.385562700700554 20.9690158041847 18.497883832535322 8 26.83199103108935 34.46032194720635 19.831805547665475 18.87588147403882 9 26.927490235628245 15.724805046228694 19.253599205777483 38.09410551236558 10-11 25.857371070938704 25.148764301495653 27.59682170733644 21.397042920229207 12-13 26.27714580824982 22.515046685280087 27.455999611212683 23.75180789525741 14-15 23.647666967832635 24.128904967047742 24.558490064860504 27.66493800025912 16-17 24.00642883887312 27.13480642637467 25.31375841338009 23.545006321372124 18-19 23.987021278306894 26.67169402194754 26.429788910968412 22.911495788777156 20-21 24.523446911619757 25.752604451867267 26.375328551089694 23.34862008542328 22-23 24.387778871450035 25.445286349583867 26.119854498801153 24.047080280164945 24-25 24.235015169539952 25.70486974151282 26.010861962235232 24.049253126711996 26-27 23.998409207702952 25.950894555420955 26.06719215063105 23.983504086245038 28-29 24.108595005657772 26.150611900092624 25.90883260984916 23.831960484400444 30-31 24.46559599082571 25.7892805232869 25.82687080969682 23.918252676190566 32-33 24.184890239385158 25.80875364535614 25.80079780795293 24.20555830730577 34-35 24.355582991247402 25.91658298799664 25.862449204666248 23.865384816089712 36-37 24.391123918499797 25.86398122094964 25.889728679949165 23.855166180601405 38-39 24.327462648314764 25.913627173833266 25.85229182895155 23.906618348900423 40-41 24.35698693897229 25.7513516879697 25.903273836764782 23.988387536293228 42-43 24.188286279763666 25.771418824342195 25.76944736591725 24.270847529976884 44-45 24.129410577072548 25.745568834678544 25.91857011204978 24.206450476199127 46-47 24.2853575273457 25.72632343214185 25.748245585017244 24.2400734554952 48-49 24.104746206426807 25.879305300435846 25.81619691598478 24.19975157715257 50-51 24.12740146062967 25.8508142127734 25.94708688192758 24.07469744466935 52-53 24.308403338442844 25.701615143900202 25.91830231888872 24.07167919876823 54-55 23.94315574015649 25.609089103164766 26.132662773272735 24.315092383406004 56-57 24.020361485621876 25.72737406533249 25.8960817544914 24.35618269455423 58-59 24.101906849532973 25.737772021400378 26.00357975671916 24.156741372347494 60-61 24.213609158596384 25.67346830326494 26.154899723929038 23.958022814209638 62-63 24.159616798459048 25.66607991330518 26.095525778493833 24.07877750974194 64-65 23.99905240599398 25.547189255847297 26.03079131984692 24.42296701831181 66-67 24.027563931932775 25.705677005140814 25.935576405085037 24.33118265784137 68-69 23.995002694390323 25.609271582203586 26.10708247576763 24.28864324763847 70-71 23.960002597990602 25.492063018751978 26.07345767014739 24.474476713110032 72-73 23.92809810176425 25.72081251941999 25.935197183675506 24.41589219514026 74-75 23.940096458398997 25.768919047920193 25.986199809523715 24.3047846841571 76-77 23.973612830394465 25.502518698938143 25.985350020574273 24.538518450093118 78-79 23.907752115652528 25.53448221775343 26.072902865377014 24.48486280121703 80-81 24.006501629779123 25.70837059975495 25.915708197446975 24.36941957301896 82-83 24.019526244283774 25.717246610979437 26.035186669352456 24.228040475384333 84-85 23.998392030781122 25.756461233456392 25.941891969496584 24.3032547662659 86-87 23.825779981517393 25.888665428777664 25.942621615736623 24.342932973968328 88-89 23.804840764593298 25.618717307625378 26.085662444015018 24.490779483766307 90-91 23.915398670273273 25.55880909236953 26.086821598569564 24.438970638787634 92-93 23.991608921564676 25.51131312490516 26.16523086181725 24.33184709171291 94-95 23.964173318337245 25.455271262811134 26.09439407737961 24.48616134147201 96-97 23.833248624597633 25.388888545938542 26.212655279343345 24.56520755012048 98-99 23.69315796981776 25.330932681149683 26.150420142708608 24.82548920632395 100-101 23.95289096046176 25.37466045766389 26.166310026823865 24.506138555050487 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 36.0 2 42.5 3 63.0 4 61.0 5 76.0 6 132.5 7 255.0 8 374.5 9 454.0 10 440.5 11 389.0 12 441.5 13 509.0 14 555.5 15 636.0 16 742.5 17 814.5 18 899.5 19 1003.0 20 1083.0 21 1164.0 22 1285.0 23 1415.0 24 1576.0 25 1874.5 26 2325.5 27 3005.0 28 4185.0 29 6101.0 30 9151.0 31 13757.0 32 20240.5 33 26858.0 34 33245.0 35 40313.0 36 49364.5 37 58587.0 38 66549.0 39 74093.5 40 80985.5 41 87318.0 42 93717.5 43 101026.5 44 108065.5 45 114960.5 46 120232.0 47 124129.0 48 128083.0 49 130465.0 50 129976.0 51 128872.5 52 127656.0 53 125557.0 54 122600.0 55 116237.0 56 107474.5 57 97437.0 58 87054.0 59 75506.5 60 62877.0 61 52214.0 62 42665.5 63 32794.0 64 24078.0 65 18073.0 66 13816.0 67 10667.0 68 8282.0 69 6405.0 70 4895.5 71 3641.5 72 2686.5 73 2020.5 74 1540.5 75 1165.0 76 888.5 77 650.0 78 410.5 79 273.0 80 212.5 81 173.0 82 134.0 83 108.0 84 82.5 85 65.5 86 62.5 87 58.5 88 48.5 89 34.0 90 25.5 91 27.5 92 26.0 93 17.5 94 16.0 95 14.5 96 16.5 97 12.5 98 5.0 99 5.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04762779697830369 2 0.055634193884139226 3 0.04670398195070728 4 0.053683917714769026 5 0.046464474350960065 6 0.016081224554455986 7 0.013651933185591358 8 0.019468546322309484 9 0.019160607979777346 10-11 0.020221284492943595 12-13 0.025901036144091876 14-15 0.04240995284095361 16-17 0.028364542884348965 18-19 0.022222883719402477 20-21 0.025422020944597445 22-23 0.04490767495260316 24-25 0.040493892042975876 26-27 0.029031742626501926 28-29 0.01972516160775293 30-31 0.012505718243943965 32-33 0.009597411675584904 34-35 0.009357904075837687 36-37 0.00152258402696445 38-39 0.006997043449757977 40-41 0.0038834446530441585 42-43 0.2066779508961519 44-45 0.1828298370356076 46-47 0.18895438851485785 48-49 0.18679882011713292 50-51 0.1857210359182704 52-53 0.19004928039941657 54-55 0.18816743497283128 56-57 0.1978846004482898 58-59 0.19519869379398172 60-61 0.19983487661766 62-63 0.19723450839183304 64-65 0.19851758481905032 66-67 0.18878331165789555 68-69 0.18787660431599537 70-71 0.17188091819002055 72-73 0.17940829989636164 74-75 0.1792714384107918 76-77 0.17738959298420653 78-79 0.20157986055867544 80-81 0.21088644157742442 82-83 0.20787548889488797 84-85 0.20325641375690595 86-87 0.21925209988288077 88-89 0.21786637734148617 90-91 0.2172505006564219 92-93 0.22139056059490952 94-95 0.23237369481188902 96-97 0.23228815638340786 98-99 0.22277628313630413 100-101 0.2323052640691041 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2922663.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.15519700604907 #Duplication Level Percentage of deduplicated Percentage of total 1 79.53211298633191 50.22866263959145 2 11.434170234737397 14.442545475510851 3 3.7425097798382954 7.0907682732825865 4 1.724247133369013 4.355806695801415 5 0.9357666177201753 2.954926254690094 6 0.6116152589119966 2.317600930109571 7 0.40882919188342187 1.8073781708654941 8 0.30707013519438825 1.5514459906300568 9 0.22106070258133517 1.2565018999637858 >10 1.0362051197068443 11.112945847353974 >50 0.036472956609633046 1.539003150378238 >100 0.00912679794909335 0.9808725388848161 >500 7.588794887878891E-4 0.32508323970497666 >1k 5.420567774110333E-5 0.036458893232638664 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.421537139245955E-5 0.0 0.0 0.0 6 0.0 3.421537139245955E-5 0.0 0.0 0.0 7 0.0 3.421537139245955E-5 0.0 0.0 0.0 8 0.0 3.421537139245955E-5 0.0 0.0 0.0 9 0.0 3.421537139245955E-5 0.0 0.0 3.421537139245955E-5 10-11 0.0 3.421537139245955E-5 0.0 0.0 3.421537139245955E-5 12-13 0.0 3.421537139245955E-5 0.0 0.0 3.421537139245955E-5 14-15 0.0 5.132305708868932E-5 0.0 1.7107685696229774E-5 1.5396917126606795E-4 16-17 0.0 6.84307427849191E-5 0.0 8.553842848114887E-5 2.3950759974721684E-4 18-19 0.0 6.84307427849191E-5 0.0 2.052922283547573E-4 2.737229711396764E-4 20-21 0.0 6.84307427849191E-5 0.0 2.052922283547573E-4 2.9083065683590615E-4 22-23 0.0 6.84307427849191E-5 0.0 2.737229711396764E-4 4.105844567095146E-4 24-25 0.0 6.84307427849191E-5 0.0 4.790151994944337E-4 4.790151994944337E-4 26-27 0.0 6.84307427849191E-5 0.0 6.671997421529611E-4 4.790151994944337E-4 28-29 0.0 6.84307427849191E-5 0.0 0.0014712609698757607 4.790151994944337E-4 30-31 0.0 6.84307427849191E-5 0.0 0.005115198023172702 4.961228851906635E-4 32-33 0.0 1.0264611417737864E-4 0.0 0.016885285782178787 5.132305708868933E-4 34-35 0.0 1.0264611417737864E-4 0.0 0.03324023330777445 5.816613136718123E-4 36-37 0.0 1.0264611417737864E-4 0.0 0.05727653171097728 5.816613136718123E-4 38-39 0.0 1.0264611417737864E-4 0.0 0.09559774767053197 5.816613136718123E-4 40-41 0.0 1.0264611417737864E-4 0.0 0.14250702184959402 5.816613136718123E-4 42-43 0.0 1.0264611417737864E-4 0.0 0.19430909413777775 5.816613136718123E-4 44-45 0.0 1.0264611417737864E-4 0.0 0.26065269926775686 5.816613136718123E-4 46-47 0.0 1.0264611417737864E-4 0.0 0.33563568567433194 5.98768999368042E-4 48-49 0.0 1.0264611417737864E-4 0.0 0.41395467079167186 6.84307427849191E-4 50-51 0.0 1.0264611417737864E-4 0.0 0.49586626990522 6.84307427849191E-4 52-53 0.0 1.0264611417737864E-4 0.0 0.5856131890676415 7.185227992416505E-4 54-55 0.0 1.0264611417737864E-4 0.0 0.6911162867562903 7.869535420265696E-4 56-57 0.0 1.0264611417737864E-4 0.0 0.8138810393124353 8.040612277227994E-4 58-59 0.0 1.0264611417737864E-4 0.0 0.9460550190015065 8.211689134190292E-4 60-61 0.0 1.0264611417737864E-4 0.0 1.0827625354000787 8.211689134190292E-4 62-63 0.0 1.1975379987360842E-4 0.0 1.2284686944748677 8.553842848114887E-4 64-65 0.0 1.368614855698382E-4 0.0 1.390444262646771 8.553842848114887E-4 66-67 0.0 1.368614855698382E-4 0.0 1.5884315092092383 8.553842848114887E-4 68-69 0.0 1.368614855698382E-4 0.0 1.800293088871348 8.553842848114887E-4 70-71 0.0 1.368614855698382E-4 0.0 2.0210506650954967 8.895996562039482E-4 72-73 0.0 1.368614855698382E-4 0.0 2.2541428827066277 0.0010948918845587055 74-75 0.0 1.368614855698382E-4 0.0 2.5079354000101963 0.0010948918845587055 76-77 0.0 1.368614855698382E-4 0.0 2.7940443355939433 0.0011119995702549353 78-79 0.0 1.368614855698382E-4 0.0 3.1112037207163468 0.001129107255951165 80-81 0.0 1.368614855698382E-4 0.0 3.4430928232232043 0.0011462149416473948 82-83 0.0 1.368614855698382E-4 0.0 3.789899827657174 0.0011633226273436246 84-85 0.0 1.368614855698382E-4 0.0 4.157954577725862 0.0011633226273436246 86-87 0.0 1.7107685696229774E-4 0.0 4.564176574582838 0.0011633226273436246 88-89 0.0 1.7107685696229774E-4 0.0 5.005469327117085 0.0011633226273436246 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2340 0.0 44.41568 1 GTATCAA 4120 0.0 38.588303 1 TCAACGC 4895 0.0 32.096504 4 CAACGCA 5010 0.0 31.547081 5 ATCAACG 5030 0.0 31.044209 3 TATCAAC 5115 0.0 30.900017 2 AACGCAG 5470 0.0 29.057217 6 GTACATG 8615 0.0 28.094606 1 TACATGG 8890 0.0 25.840666 2 ACATGGG 9370 0.0 24.009962 3 ACGCAGA 6470 0.0 23.98401 7 CGCAGAG 6835 0.0 22.636896 8 CATGGGG 8070 0.0 22.115498 4 GAGTACA 6435 0.0 18.511143 1 GCAGAGT 7780 0.0 18.483574 9 ATGGGGG 5270 0.0 18.46273 5 CTATACG 190 1.8771757E-4 17.487465 4 AGAGTAC 6305 0.0 17.463581 10-11 AGTACAT 6605 0.0 16.743383 2 TATACTG 1125 0.0 16.453743 5 >>END_MODULE