##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921361_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2922663 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.405266361533986 33.0 31.0 34.0 29.0 34.0 2 31.53799360377847 34.0 31.0 34.0 29.0 34.0 3 31.6098670972329 34.0 31.0 34.0 28.0 34.0 4 35.09013389501287 37.0 35.0 37.0 33.0 37.0 5 34.821653403077946 37.0 35.0 37.0 32.0 37.0 6 34.77974881127246 37.0 35.0 37.0 32.0 37.0 7 34.64465283886647 37.0 35.0 37.0 32.0 37.0 8 34.609793876338124 37.0 35.0 37.0 32.0 37.0 9 36.23382134717551 39.0 37.0 39.0 32.0 39.0 10-11 36.08185480159703 39.0 37.0 39.0 32.0 39.0 12-13 36.017453089870436 39.0 37.0 39.0 31.5 39.0 14-15 37.26887140255308 40.0 38.0 41.0 31.0 41.0 16-17 37.243944991263106 40.0 38.0 41.0 31.0 41.0 18-19 37.2038582621397 40.0 38.0 41.0 31.0 41.0 20-21 37.16693731025438 40.0 38.0 41.0 31.0 41.0 22-23 37.05635374314453 40.0 38.0 41.0 31.0 41.0 24-25 36.98907828237467 40.0 37.5 41.0 31.0 41.0 26-27 36.85598356704143 40.0 37.0 41.0 30.0 41.0 28-29 36.70629319904484 40.0 37.0 41.0 30.0 41.0 30-31 36.577471983598514 40.0 37.0 41.0 30.0 41.0 32-33 36.53746873998131 40.0 37.0 41.0 30.0 41.0 34-35 36.67288941626181 40.0 37.0 41.0 30.0 41.0 36-37 36.658989763787346 40.0 37.0 41.0 30.0 41.0 38-39 36.57712555296317 40.0 37.0 41.0 30.0 41.0 40-41 36.46714947977239 40.0 37.0 41.0 30.0 41.0 42-43 36.37152538626589 40.0 37.0 41.0 29.5 41.0 44-45 36.24693712549137 40.0 36.0 41.0 29.0 41.0 46-47 36.101373473438436 40.0 36.0 41.0 28.5 41.0 48-49 35.9561711357074 40.0 36.0 41.0 28.0 41.0 50-51 35.808280496246056 40.0 35.0 41.0 28.0 41.0 52-53 35.640334516843026 39.0 35.0 41.0 27.5 41.0 54-55 35.440163987432015 39.0 35.0 41.0 27.0 41.0 56-57 35.17758410737057 39.0 35.0 41.0 26.0 41.0 58-59 34.952528225115245 38.5 35.0 41.0 26.0 41.0 60-61 34.6785431642307 38.0 35.0 40.0 26.0 41.0 62-63 34.3838364190466 37.5 34.0 40.0 26.0 41.0 64-65 34.070822568322114 37.0 34.0 40.0 25.5 41.0 66-67 33.73401859879158 36.5 34.0 39.5 24.5 41.0 68-69 33.36854077941932 36.0 34.0 39.0 23.5 41.0 70-71 32.99061865839476 35.5 33.5 39.0 23.0 40.0 72-73 32.592938529005906 35.0 33.0 37.5 22.0 40.0 74-75 32.18779585603951 35.0 33.0 37.0 21.5 39.0 76-77 29.45573471864529 33.0 29.0 34.5 15.0 36.5 78-79 31.106452745321647 34.5 31.5 36.0 19.0 37.5 80-81 31.299092642566045 35.0 32.0 36.0 20.0 37.0 82-83 31.14175377044839 35.0 32.5 35.0 19.5 37.0 84-85 30.920348326166923 35.0 32.0 35.0 18.0 36.5 86-87 30.683362741445045 35.0 32.0 35.0 16.0 36.0 88-89 30.41524065552546 35.0 32.0 35.0 10.0 36.0 90-91 30.242885512287934 35.0 32.0 35.0 4.5 35.0 92-93 30.11130995944452 34.0 32.0 35.0 3.5 35.0 94-95 30.02280420287936 34.0 32.0 35.0 2.0 35.0 96-97 29.846495986708014 34.0 31.5 35.0 2.0 35.0 98-99 29.597722009003434 34.0 31.0 35.0 2.0 35.0 100-101 28.53524645160937 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57402.0 3 19550.0 4 10373.0 5 7178.0 6 6176.0 7 6260.0 8 6402.0 9 6787.0 10 7473.0 11 8105.0 12 8554.0 13 9242.0 14 9690.0 15 10772.0 16 11561.0 17 11905.0 18 11282.0 19 10400.0 20 9937.0 21 9824.0 22 10311.0 23 11836.0 24 13991.0 25 16657.0 26 20383.0 27 24840.0 28 29634.0 29 35888.0 30 44332.0 31 54341.0 32 69946.0 33 92947.0 34 134677.0 35 202231.0 36 355628.0 37 708198.0 38 762102.0 39 95846.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.25842348584218 20.141804311147112 14.261160613324892 25.33861158968581 2 15.180385765946214 21.07349042120293 37.65404240599209 26.092081406858767 3 17.753674266583815 25.090813033278494 29.019999397773404 28.135513302364284 4 13.412077891415999 17.222132878020073 35.20059674323275 34.16519248733118 5 14.628602015259903 37.28894769373142 33.826310634223006 14.256139656785674 6 33.5306332701823 35.355637726795415 17.004930160338848 14.10879884268344 7 28.987023136091985 31.68247587901855 21.037492177510718 18.29300880737875 8 26.861467166036977 35.02918962271446 19.544147807408027 18.565195403840534 9 26.666434002141198 15.878190540613133 19.236634535011394 38.21874092223428 10-11 25.7469920389918 25.506581201718546 27.530405831782286 21.216020927507373 12-13 26.252939319780026 22.70638964709344 27.53302431092251 23.50764672220402 14-15 23.55356602104694 24.370738901254573 24.559565990251546 27.516129087446945 16-17 23.91786933820561 27.43379318839687 25.289582093024848 23.358755380372674 18-19 23.964926405088253 26.886807865931466 26.48044782576935 22.667817903210935 20-21 24.478228944906697 25.886595073909152 26.43291583437178 23.20226014681237 22-23 24.340805978115824 25.58621255979142 26.136926635325352 23.936054826767396 24-25 24.166046502874995 25.921375206792547 25.993776121726604 23.918802168605854 26-27 23.930192115390703 26.160626224832917 26.08911437362547 23.82006728615091 28-29 24.04876069170091 26.356340871117208 25.922359696928325 23.67253874025356 30-31 24.45019497881848 25.953972645304173 25.864606284116586 23.731226091760757 32-33 24.18487220406559 25.982438571015244 25.773285130856927 24.05940409406224 34-35 24.308717145532594 26.09834555442499 25.917617004327187 23.67532029571523 36-37 24.32169296021 26.043387425906133 25.987376498814086 23.64754311506978 38-39 24.30849321208523 26.06809042797523 25.863499229725 23.75991713021454 40-41 24.36580217041362 25.926555770760988 25.87848099446695 23.829161064358438 42-43 24.231613367268658 25.94353245356078 25.72843689241321 24.096417286757355 44-45 24.164092603979643 25.903180340423 25.85274274121166 24.0799843143857 46-47 24.23975311983567 25.84143900051653 25.747303704725194 24.17150417492261 48-49 24.06356716130111 26.06086280913512 25.81385071106873 24.061719318495044 50-51 24.14573314819542 26.006721628629677 25.861691986261103 23.985853236913798 52-53 24.348286067246843 25.81881568270667 25.78448005822172 24.04841819182477 54-55 23.957693750670412 25.74889872740122 26.040792208007723 24.252615313920643 56-57 24.064525555337706 25.92255742598548 25.775457390775912 24.237459627900897 58-59 24.129212401803656 25.852232627491638 25.926452510310455 24.092102460394248 60-61 24.198942667966946 25.902838371913976 25.990487433489022 23.90773152663005 62-63 24.158682802763998 25.87197961496764 25.930241630802588 24.03909595146577 64-65 23.948549869716395 25.70247557674411 25.924503619977802 24.424470933561693 66-67 23.973651716976725 25.86095273789568 25.81390712213121 24.35148842299639 68-69 23.908978217553408 25.79806112062929 25.942607774272442 24.35035288754486 70-71 23.878414261277044 25.68178259117176 25.926538883150734 24.513264264400462 72-73 23.867162594077275 25.874617932717825 25.78195667046438 24.476262802740514 74-75 23.844583380604597 25.902290769689102 25.802991171524788 24.450134678181517 76-77 23.785149136254667 25.5773220979563 25.929336474849013 24.70819229094002 78-79 23.670833917515377 25.664944677746355 25.981592744741462 24.682628659996805 80-81 23.838497847377415 25.74966930130143 25.81409735002848 24.597735501292668 82-83 23.78234571325563 25.773373690382222 25.92975183631816 24.514528760043987 84-85 23.677471986150643 25.756586563859802 25.888186925221728 24.67775452476782 86-87 23.549089295320616 25.872412656005967 25.839608043088415 24.738890005585002 88-89 23.470850654933148 25.648723787751027 25.940769562744386 24.939655994571442 90-91 23.460094949792076 25.573579910583195 25.993668297674105 24.972656841950624 92-93 23.50162604409147 25.511810214980144 26.04087361358346 24.94569012734493 94-95 23.41843530937033 25.47148312782097 25.994026414757336 25.116055148051363 96-97 23.233127885474794 25.405095681762496 26.104094037905885 25.257682394856822 98-99 23.049847893901077 25.345057244653873 26.024821470791217 25.580273390653836 100-101 23.044765446101916 25.3991577769623 26.094731700724267 25.461345076211515 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 25.5 2 31.5 3 55.0 4 54.5 5 48.5 6 83.0 7 204.5 8 320.0 9 343.0 10 305.5 11 251.5 12 257.0 13 300.0 14 336.5 15 373.5 16 395.0 17 428.5 18 505.0 19 564.5 20 641.0 21 760.5 22 891.5 23 1054.0 24 1304.0 25 1676.0 26 2207.5 27 3038.5 28 4448.0 29 6750.5 30 10125.5 31 15157.5 32 21856.5 33 28112.5 34 34280.0 35 41248.0 36 49698.0 37 58304.5 38 66393.0 39 74254.0 40 81281.5 41 87740.0 42 93847.0 43 100983.5 44 108332.5 45 115319.5 46 120710.5 47 125190.0 48 129352.0 49 131536.5 50 131239.0 51 130368.0 52 128926.0 53 126325.5 54 123006.0 55 116523.0 56 107555.0 57 97363.5 58 86585.5 59 74869.5 60 62174.0 61 51208.5 62 41626.0 63 31750.5 64 23071.0 65 16892.0 66 12676.0 67 9868.5 68 7626.0 69 5811.5 70 4470.5 71 3323.0 72 2361.5 73 1707.0 74 1286.5 75 952.0 76 669.0 77 411.5 78 245.5 79 154.5 80 87.0 81 43.5 82 29.5 83 23.0 84 14.0 85 7.5 86 6.0 87 6.0 88 4.0 89 2.5 90 1.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14627071270276457 2 3.421537139245955E-4 3 0.005987689993680421 4 0.00455064439519712 5 0.025901036144091876 6 0.001368614855698382 7 0.0 8 0.0016765531982305178 9 0.0 10-11 0.09818100821066267 12-13 1.8818454265852753E-4 14-15 0.0050638749660840135 16-17 1.0264611417737864E-4 18-19 2.908306568359062E-4 20-21 7.185227992416505E-4 22-23 1.0264611417737864E-4 24-25 0.0016423378268380583 26-27 0.002412183683168398 28-29 0.006364059078997475 30-31 0.014455994413314159 32-33 0.013908548471034806 34-35 0.011102888016853123 36-37 6.500920564567314E-4 38-39 1.8818454265852753E-4 40-41 0.004533536709500891 42-43 0.008245904505582751 44-45 0.008211689134190292 46-47 0.009357904075837687 48-49 0.011513472473562639 50-51 0.00537181330861615 52-53 0.0014541532841795307 54-55 7.356304849378802E-4 56-57 0.005542890165578447 58-59 0.00908418110469801 60-61 0.0072878741065938845 62-63 0.017757777752686506 64-65 0.03284675653676117 66-67 0.03525894021992956 68-69 0.02631162060080139 70-71 0.040562322785760795 72-73 0.02497722111649547 74-75 0.023865221546240534 76-77 0.23516224758037446 78-79 0.06543689778807889 80-81 0.05388920994312379 82-83 0.01982780772193031 84-85 0.032111126051823285 86-87 0.08013239980114026 88-89 0.26376629806447066 90-91 0.3157565548953129 92-93 0.050057088347168315 94-95 0.004447998281019741 96-97 0.0091355041617867 98-99 0.0010948918845587055 100-101 0.0013857225413946117 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2922663.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.042079249187324 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62146096627617 48.77838911956594 2 11.879711649950133 14.740840232874 3 3.97313402319177 7.395044878035187 4 1.7592994758270384 4.366023900092594 5 1.0166885286453335 3.153873513297672 6 0.6515209150898296 2.4253027347903746 7 0.43051810757605113 1.8697166983910465 8 0.2906673079423964 1.4426883323608075 9 0.2274464251943735 1.2700124223168308 >10 1.101962014201178 11.641422665862484 >50 0.03735349105129397 1.564683749016737 >100 0.009574255551801204 1.0396654219176704 >500 5.523662522505115E-4 0.23800480824638315 >1k 1.1047325038195341E-4 0.0743315232321947 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0264611417737864E-4 0.0 5 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 6 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 7 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 8 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 9 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 10-11 0.0 0.0 0.0 1.0264611417737864E-4 3.421537139245955E-5 12-13 0.0 3.421537139245955E-5 0.0 1.7107685696229774E-4 3.421537139245955E-5 14-15 0.0 3.421537139245955E-5 0.0 1.7107685696229774E-4 8.553842848114887E-5 16-17 0.0 3.421537139245955E-5 0.0 2.052922283547573E-4 1.368614855698382E-4 18-19 0.0 3.421537139245955E-5 0.0 2.3950759974721684E-4 2.052922283547573E-4 20-21 0.0 3.421537139245955E-5 0.0 2.3950759974721684E-4 2.052922283547573E-4 22-23 0.0 3.421537139245955E-5 0.0 3.2504602822836567E-4 2.566152854434466E-4 24-25 0.0 3.421537139245955E-5 0.0 4.790151994944337E-4 3.079383425321359E-4 26-27 0.0 3.421537139245955E-5 0.0 6.671997421529611E-4 3.079383425321359E-4 28-29 0.0 3.421537139245955E-5 0.0 0.0014883686555719903 3.079383425321359E-4 30-31 0.0 3.421537139245955E-5 0.0 0.005269167194438771 3.079383425321359E-4 32-33 0.0 3.421537139245955E-5 0.0 0.017141901067622235 3.76369085317055E-4 34-35 0.0 3.421537139245955E-5 0.0 0.033599494707395275 3.76369085317055E-4 36-37 0.0 5.132305708868932E-5 0.0 0.05778976228186418 3.76369085317055E-4 38-39 0.0 6.84307427849191E-5 0.0 0.0965215626981284 4.2769214240574434E-4 40-41 0.0 6.84307427849191E-5 0.0 0.14372166753402632 4.790151994944337E-4 42-43 0.0 6.84307427849191E-5 0.0 0.19569481667917238 4.790151994944337E-4 44-45 0.0 6.84307427849191E-5 0.0 0.262449006265861 5.132305708868933E-4 46-47 0.0 6.84307427849191E-5 0.0 0.33772282332927195 5.816613136718123E-4 48-49 0.0 6.84307427849191E-5 0.0 0.415904946961042 6.84307427849191E-4 50-51 0.0 6.84307427849191E-5 0.0 0.49762836153193163 6.84307427849191E-4 52-53 0.0 6.84307427849191E-5 0.0 0.5869646962376436 7.356304849378804E-4 54-55 0.0 6.84307427849191E-5 0.0 0.692348040126419 8.040612277227994E-4 56-57 0.0 6.84307427849191E-5 0.0 0.8151641157396525 8.211689134190292E-4 58-59 0.0 6.84307427849191E-5 0.0 0.947132803200369 8.553842848114887E-4 60-61 0.0 6.84307427849191E-5 0.0 1.0834126274565354 8.553842848114887E-4 62-63 0.0 6.84307427849191E-5 0.0 1.2286397713318298 9.238150275964078E-4 64-65 0.0 6.84307427849191E-5 0.0 1.3907179856179108 9.238150275964078E-4 66-67 0.0 6.84307427849191E-5 0.0 1.589167139694176 9.409227132926376E-4 68-69 0.0 6.84307427849191E-5 0.0 1.7998653967289422 9.580303989888674E-4 70-71 0.0 6.84307427849191E-5 0.0 2.021649434094865 9.751380846850972E-4 72-73 0.0 6.84307427849191E-5 0.0 2.2549469439343506 0.001129107255951165 74-75 0.0 6.84307427849191E-5 0.0 2.5107239527786818 0.001129107255951165 76-77 0.0 6.84307427849191E-5 0.0 2.7997583026164836 0.001129107255951165 78-79 0.0 6.84307427849191E-5 0.0 3.1191074715080047 0.001129107255951165 80-81 0.0 6.84307427849191E-5 0.0 3.4539733113260063 0.0011462149416473948 82-83 0.0 6.84307427849191E-5 0.0 3.803278037871626 0.0012317533701285436 84-85 0.0 6.84307427849191E-5 0.0 4.173796294680571 0.0012317533701285436 86-87 0.0 6.84307427849191E-5 0.0 4.583747767019325 0.0012317533701285436 88-89 0.0 6.84307427849191E-5 0.0 5.027692210836488 0.0012317533701285436 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2245 0.0 49.54039 1 GTATCAA 3950 0.0 40.6705 1 TCAACGC 5020 0.0 31.29549 4 ATCAACG 5100 0.0 30.804577 3 TATCAAC 5185 0.0 30.299582 2 CAACGCA 5190 0.0 30.048496 5 AACGCAG 5610 0.0 27.880281 6 GTACATG 8635 0.0 24.05354 1 TACATGG 8965 0.0 22.65953 2 ACGCAGA 6795 0.0 22.3881 7 CGCAGAG 7155 0.0 21.328096 8 ACATGGG 9330 0.0 21.264349 3 CATGGGG 7985 0.0 20.685297 4 GCAGAGT 8285 0.0 17.673187 9 AGAGTAC 6840 0.0 17.549389 10-11 ATGGGGG 5020 0.0 17.522024 5 ATACCGT 330 1.1994416E-8 17.287468 6 GAGTACA 6655 0.0 16.283459 1 TATACCG 240 6.1015307E-5 15.848749 5 CAGAGTA 7595 0.0 15.710957 10-11 >>END_MODULE