##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921360_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2614152 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.50906335974343 31.0 31.0 34.0 27.0 34.0 2 30.563314604506548 33.0 31.0 34.0 26.0 34.0 3 30.60414620113903 33.0 31.0 34.0 26.0 34.0 4 34.073245167075214 37.0 35.0 37.0 30.0 37.0 5 34.06925840578513 37.0 35.0 37.0 30.0 37.0 6 34.11928610119075 37.0 35.0 37.0 30.0 37.0 7 34.04467108263024 37.0 35.0 37.0 30.0 37.0 8 34.011744152597096 37.0 35.0 37.0 30.0 37.0 9 35.57843231763111 39.0 37.0 39.0 30.0 39.0 10-11 35.47744545841252 39.0 37.0 39.0 30.0 39.0 12-13 35.36839059090673 39.0 35.0 39.0 30.0 39.0 14-15 36.50713883507922 40.0 37.0 41.0 29.0 41.0 16-17 36.45545936120011 40.0 37.0 41.0 29.0 41.0 18-19 36.41204853428569 40.0 37.0 41.0 28.5 41.0 20-21 36.3564735332911 40.0 37.0 41.0 28.0 41.0 22-23 36.2418193356775 40.0 37.0 41.0 27.5 41.0 24-25 36.14153920659548 40.0 36.0 41.0 27.0 41.0 26-27 35.99267907910481 40.0 36.0 41.0 27.0 41.0 28-29 35.851507486940314 40.0 36.0 41.0 27.0 41.0 30-31 35.69944058340907 40.0 36.0 41.0 26.5 41.0 32-33 35.5071457206773 39.5 35.0 41.0 25.5 41.0 34-35 35.34180185390903 39.0 35.0 41.0 25.0 41.0 36-37 35.169070122930876 39.0 35.0 41.0 25.0 41.0 38-39 35.38853555569837 39.5 35.0 41.0 25.0 41.0 40-41 35.500154352157026 40.0 35.0 41.0 25.0 41.0 42-43 35.322952720423295 40.0 35.0 41.0 24.0 41.0 44-45 35.192724447545515 40.0 35.0 41.0 24.0 41.0 46-47 35.023428630010805 40.0 35.0 41.0 23.0 41.0 48-49 34.868323265058805 39.5 35.0 41.0 23.0 41.0 50-51 33.139466067772645 37.0 32.5 39.5 18.5 40.0 52-53 33.2930298238205 37.5 33.5 39.5 19.0 40.0 54-55 34.152917083627884 39.0 34.0 40.5 19.5 41.0 56-57 34.16633596669207 39.0 34.0 41.0 20.0 41.0 58-59 33.9809745186967 38.0 34.0 41.0 18.5 41.0 60-61 33.73837940563517 38.0 34.0 40.0 18.0 41.0 62-63 33.44747130235732 37.0 34.0 40.0 15.0 41.0 64-65 33.15726323488458 37.0 33.0 40.0 13.0 41.0 66-67 32.8150101830345 36.0 33.0 39.5 9.5 41.0 68-69 32.4518669916669 36.0 33.0 39.0 7.5 41.0 70-71 32.07227181127953 35.0 32.5 39.0 6.0 40.5 72-73 31.71702066291478 35.0 32.0 37.5 2.0 40.0 74-75 31.329152245164014 35.0 32.0 37.0 2.0 39.0 76-77 30.955062482977272 35.0 32.0 36.5 2.0 39.0 78-79 30.615404154004814 35.0 31.5 36.0 2.0 38.5 80-81 30.275054587491468 35.0 31.0 36.0 2.0 37.0 82-83 29.981116247257237 35.0 31.0 35.0 2.0 37.0 84-85 29.749255016540737 35.0 31.0 35.0 2.0 36.5 86-87 29.525427366121022 35.0 31.0 35.0 2.0 36.0 88-89 29.323526711530164 35.0 31.0 35.0 2.0 36.0 90-91 29.07084668374295 35.0 30.0 35.0 2.0 35.5 92-93 28.881714414464042 34.0 30.0 35.0 2.0 35.0 94-95 28.67811416474635 34.0 30.0 35.0 2.0 35.0 96-97 28.430413954506086 34.0 30.0 35.0 2.0 35.0 98-99 28.193679059213082 34.0 30.0 35.0 2.0 35.0 100-101 27.14574821969036 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83516.0 3 14417.0 4 9939.0 5 7757.0 6 7100.0 7 7516.0 8 7918.0 9 8348.0 10 9277.0 11 9845.0 12 10010.0 13 9989.0 14 11149.0 15 12453.0 16 12645.0 17 13364.0 18 12358.0 19 10844.0 20 10738.0 21 11352.0 22 12544.0 23 14200.0 24 16823.0 25 19379.0 26 23284.0 27 27752.0 28 32864.0 29 38781.0 30 46654.0 31 56450.0 32 71218.0 33 91284.0 34 128151.0 35 187365.0 36 311083.0 37 558991.0 38 588638.0 39 108141.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69935851729891 18.125703971865235 13.479135642150553 24.6958018686853 2 16.64834563368702 19.59889951321679 38.384873359049124 25.36788149404707 3 19.70494536280384 23.16588795777214 29.155159533264545 27.974007146159472 4 14.272023135856177 16.12012059366007 35.214933282709616 34.39292298777414 5 15.15220519571973 36.2393414264501 33.536694579244674 15.071758798585492 6 33.78886402869771 33.99519766402625 17.04354852532475 15.172389781951297 7 29.068426161181826 31.489401751715235 20.529837809671122 18.912334277431814 8 26.899955617453053 33.70751136346245 19.83429240446274 19.558240614621752 9 26.660075580676846 16.046565104255343 19.59920891663743 37.69415039843038 10-11 25.848907818763458 25.09786223950432 27.250219331556234 21.803010610175992 12-13 26.42370066419117 22.812250870917488 26.983796888401073 23.78025157649027 14-15 23.855877604113847 24.490332866569794 24.43721443581376 27.2165750935026 16-17 23.80639800629328 27.352933805026243 25.485766084218653 23.354902104461832 18-19 23.783032095303923 26.49316998877591 26.943970051754775 22.779827864165394 20-21 24.201099140347203 25.602669526691628 27.03462066342529 23.161610669535875 22-23 24.17444264401855 25.436114264195194 26.633261409848284 23.756181681937967 24-25 24.042316739906543 25.765364013588442 26.52610708418306 23.66621216232196 26-27 23.673018565524035 26.048002087729405 26.56499827521256 23.713981071534004 28-29 23.73750977562361 26.23410074210566 26.520597296341812 23.507792185928917 30-31 24.123874547695763 25.712305047214095 26.510116541269962 23.653703863820176 32-33 23.828061039451917 25.778659298921617 26.348054030810474 24.045225630815985 34-35 24.19582003354731 25.95704421767992 26.27931874745234 23.567817001320428 36-37 24.141887656842663 25.872084516250087 26.363472742021276 23.62255508488597 38-39 23.909012919866985 25.991666021103693 26.45421428291343 23.64510677611589 40-41 24.108705311416863 25.707281328606875 26.494213157113037 23.68980020286323 42-43 24.00111473339836 25.749862335408636 26.249690697898625 23.99933223329438 44-45 23.974738925333163 25.871235740009528 26.2733917114518 23.88063362320551 46-47 24.094197691126347 25.89641228123631 26.022372794828662 23.98701723280868 48-49 23.82272073291599 26.054808496416904 26.1745389572412 23.947931813425907 50-51 23.928424902121563 26.0554688229082 26.294466397481404 23.721639877488833 52-53 24.20211293017526 25.788123261989504 26.20184425777909 23.807919550056138 54-55 23.735438833711616 25.77637835231641 26.39764967043109 24.09053314354089 56-57 23.765482318529603 25.964471280750708 26.17534531269554 24.094701088024145 58-59 23.80627405030578 25.88432395822973 26.34463715671749 23.964764834747008 60-61 23.780897056766065 25.842579052576504 26.58684907038118 23.78967482027625 62-63 23.821419748721077 25.78950364200544 26.561428261778232 23.827648347495252 64-65 23.599603282977103 25.72970538490655 26.488488977687062 24.18220235442929 66-67 23.665745611253037 25.89113021528704 26.259584319687928 24.183539853771993 68-69 23.708807323661993 25.819158576820783 26.447457857075374 24.02457624244185 70-71 23.615406133483546 25.68724828614237 26.437877690536133 24.259467889837946 72-73 23.5641864865129 25.828595495402105 26.40068092268703 24.206537095397966 74-75 23.614123452304923 25.953239522657373 26.387342399386526 24.045294625651177 76-77 23.665332797844147 25.652665770437626 26.382876557989952 24.299124873728278 78-79 23.57396106306768 25.739259895849003 26.40097960429062 24.285799436792697 80-81 23.64747581465029 25.961625451774207 26.235756749587136 24.155141983988372 82-83 23.630044433063475 25.900573593243692 26.446547112809228 24.02283486088361 84-85 23.63035628072447 25.937246707885304 26.378968031504485 24.053428979885744 86-87 23.56267251044863 26.11516102189252 26.200866330963578 24.12130013669527 88-89 23.439480067895573 25.949373518618092 26.287586247216943 24.323560166269395 90-91 23.47461550183875 25.8085267684711 26.372179460269724 24.344678269420427 92-93 23.53019770910626 25.71636915156727 26.541112368196167 24.212320771130308 94-95 23.491818889243135 25.635354836879117 26.57157137102982 24.301254902847933 96-97 23.583549554820824 25.509278767938206 26.518001373439397 24.389170303801574 98-99 23.352663916985072 25.569565947501477 26.480139186336555 24.597630949176896 100-101 23.56496001138013 25.475272851851834 26.56135061594763 24.398416520820405 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 79.0 1 61.5 2 64.5 3 93.5 4 96.0 5 101.0 6 177.0 7 385.0 8 620.5 9 730.5 10 681.5 11 576.5 12 552.5 13 614.0 14 694.0 15 784.5 16 880.5 17 970.5 18 1094.0 19 1262.0 20 1415.0 21 1548.0 22 1696.5 23 1960.0 24 2336.0 25 2854.0 26 3641.5 27 4868.5 28 6711.0 29 9505.5 30 13444.0 31 18808.0 32 25802.5 33 30764.5 34 34437.5 35 39383.0 36 45840.5 37 52705.0 38 58944.0 39 64811.5 40 69816.0 41 75444.0 42 81231.5 43 87141.0 44 92947.0 45 99715.5 46 104040.5 47 106953.5 48 110558.0 49 112118.5 50 113013.0 51 113343.0 52 112913.0 53 111421.5 54 108804.5 55 103077.5 56 94564.5 57 84694.5 58 75856.0 59 66695.0 60 55403.0 61 45915.5 62 38416.0 63 29606.0 64 21227.5 65 15974.5 66 12196.5 67 9491.5 68 7460.5 69 5783.0 70 4435.0 71 3246.0 72 2352.0 73 1720.0 74 1259.0 75 929.0 76 650.0 77 444.5 78 320.5 79 212.5 80 142.5 81 111.0 82 88.0 83 74.5 84 71.0 85 53.0 86 38.5 87 39.5 88 32.0 89 25.5 90 21.5 91 15.0 92 17.0 93 21.0 94 16.0 95 12.0 96 10.0 97 5.5 98 3.0 99 3.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04969106616600718 2 0.056997450798576356 3 0.04896425303501862 4 0.05397543830657131 5 0.047128093546205424 6 0.01621940881784992 7 0.01419198271561868 8 0.019585701214007448 9 0.019929981118159926 10-11 0.02023600769962879 12-13 0.02572535950472658 14-15 0.04295848137369212 16-17 0.027867545575008645 18-19 0.022053040527100186 20-21 0.025055926357763436 22-23 0.045521453993493874 24-25 0.04012773549510511 26-27 0.030086238290657926 28-29 0.019432687923273014 30-31 0.012011543322653006 32-33 0.009027784153331558 34-35 0.00885564420125532 36-37 0.0010519663737992282 38-39 0.005910138354617483 40-41 0.0028881258626124264 42-43 0.2087292552231087 44-45 0.18518433511134777 46-47 0.1913048667407251 48-49 0.18965997386532996 50-51 0.18822547426469463 52-53 0.1922803264691571 54-55 0.19073106690047095 56-57 0.20077256410491814 58-59 0.19767404496754587 60-61 0.20224531702823706 62-63 0.19962496442440988 64-65 0.20042828420076567 66-67 0.19155351333816856 68-69 0.189946873785457 70-71 0.17374659162894887 72-73 0.1817606627311648 74-75 0.1816076494404304 76-77 0.179790616612959 78-79 0.20440662975986096 80-81 0.21222943424865884 82-83 0.2107375546639981 84-85 0.20582200269915443 86-87 0.2216971316128519 88-89 0.21936367892915176 90-91 0.21878987908889763 92-93 0.22282560463201834 94-95 0.23340264835403604 96-97 0.23338352169269425 98-99 0.22378193769910854 100-101 0.2332496350633016 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2614152.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.69573776495035 #Duplication Level Percentage of deduplicated Percentage of total 1 78.80685820501853 48.62047257896449 2 11.975133480263697 14.776293897972526 3 3.798426654814017 7.030402044444095 4 1.751457855225792 4.322299381694913 5 0.9745353584090064 3.0062338957536983 6 0.6060533635889075 2.2434545634928407 7 0.4282501256763836 1.8494845216076035 8 0.294988166298604 1.4559610041377793 9 0.22102515722938454 1.2272679125892927 >10 1.0911891158587117 11.413721521939111 >50 0.037049530625519154 1.5549365177781638 >100 0.013229709095877179 1.4953038450837488 >500 0.0012436399279615261 0.5524364366574143 >1k 5.596379675701428E-4 0.45173187788426816 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 3.8253322683608296E-5 9 0.0 0.0 0.0 0.0 3.8253322683608296E-5 10-11 0.0 0.0 0.0 0.0 7.650664536721659E-5 12-13 0.0 0.0 0.0 0.0 1.5301329073443318E-4 14-15 0.0 0.0 0.0 0.0 1.5301329073443318E-4 16-17 0.0 0.0 0.0 0.0 1.9126661341804148E-4 18-19 0.0 0.0 0.0 0.0 2.2951993610164978E-4 20-21 0.0 0.0 0.0 0.0 2.677732587852581E-4 22-23 0.0 0.0 0.0 3.8253322683608296E-5 3.4427990415247464E-4 24-25 0.0 0.0 0.0 2.2951993610164978E-4 3.8253322683608296E-4 26-27 0.0 0.0 0.0 5.546731789123204E-4 4.207865495196913E-4 28-29 0.0 0.0 0.0 0.0024099593290673226 4.207865495196913E-4 30-31 0.0 0.0 0.0 0.010137130511156198 4.207865495196913E-4 32-33 0.0 0.0 0.0 0.029971478322607104 5.355465175705162E-4 34-35 0.0 0.0 0.0 0.05820243046311002 5.355465175705162E-4 36-37 0.0 0.0 0.0 0.09842579926492415 5.355465175705162E-4 38-39 0.0 0.0 0.0 0.1489584385299707 5.737998402541245E-4 40-41 1.9126661341804148E-5 0.0 0.0 0.211043581245467 5.737998402541245E-4 42-43 3.8253322683608296E-5 0.0 0.0 0.28242428137308007 6.120531629377327E-4 44-45 3.8253322683608296E-5 0.0 0.0 0.3830113933696281 6.311798242795369E-4 46-47 3.8253322683608296E-5 0.0 0.0 0.49756096814569317 7.459397923303618E-4 48-49 3.8253322683608296E-5 0.0 0.0 0.6069080910367874 9.180797444065991E-4 50-51 3.8253322683608296E-5 0.0 0.0 0.7124681349822046 9.180797444065991E-4 52-53 3.8253322683608296E-5 0.0 0.0 0.8315889818189608 0.001032839712457424 54-55 3.8253322683608296E-5 0.0 0.0 0.9885423647898056 0.0012049796645336613 56-57 3.8253322683608296E-5 0.0 0.0 1.1782405919778192 0.0012241063258754655 58-59 3.8253322683608296E-5 0.0 0.0 1.3570174955396626 0.0012241063258754655 60-61 3.8253322683608296E-5 0.0 0.0 1.5327341332868172 0.0012623596485590739 62-63 3.8253322683608296E-5 0.0 0.0 1.7237329734460736 0.0013388662939262904 64-65 3.8253322683608296E-5 0.0 0.0 1.9627971135572837 0.0013388662939262904 66-67 3.8253322683608296E-5 0.0 0.0 2.2608670039079595 0.0013388662939262904 68-69 3.8253322683608296E-5 0.0 0.0 2.5699538511915145 0.0013388662939262904 70-71 3.8253322683608296E-5 0.0 0.0 2.8592254773249604 0.0013771196166098988 72-73 3.8253322683608296E-5 0.0 0.0 3.1640662057906352 0.0014918795846607237 74-75 3.8253322683608296E-5 0.0 0.0 3.5172400074670485 0.001549259568686136 76-77 3.8253322683608296E-5 0.0 0.0 3.945772854830171 0.0015683862300279402 78-79 3.8253322683608296E-5 0.0 0.0 4.41795274337529 0.0015683862300279402 80-81 3.8253322683608296E-5 0.0 0.0 4.873224663294254 0.0015875128913697444 82-83 3.8253322683608296E-5 0.0 0.0 5.331308202430463 0.0016831461980787651 84-85 3.8253322683608296E-5 0.0 0.0 5.836137301886042 0.0016831461980787651 86-87 3.8253322683608296E-5 0.0 0.0 6.4243395181305445 0.0016831461980787651 88-89 3.8253322683608296E-5 0.0 0.0 7.072828970924414 0.0017022728594205693 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3030 0.0 56.22971 1 GTATCAA 5065 0.0 40.75903 1 TATCAAC 6250 0.0 32.121758 2 TCAACGC 6315 0.0 31.714762 4 ATCAACG 6350 0.0 31.54237 3 CAACGCA 6400 0.0 31.439453 5 AACGCAG 6730 0.0 30.171818 6 ACGCAGA 8025 0.0 24.42039 7 CGCAGAG 8070 0.0 23.815186 8 GTACATG 7515 0.0 23.808191 1 TACATGG 7590 0.0 22.886444 2 GTGGTAT 1325 0.0 21.132467 1 ACATGGG 7945 0.0 21.088047 3 GCAGAGT 8980 0.0 19.975054 9 CATGGGG 6780 0.0 18.759768 4 GAGTACT 4125 0.0 18.636824 12-13 TGGTATC 1435 0.0 18.190714 2 CAGAGTA 8555 0.0 18.138626 10-11 GTATAGG 525 0.0 18.07943 1 GAGTACA 6120 0.0 17.835712 1 >>END_MODULE