##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921360_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2614152 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45059353855476 33.0 31.0 34.0 29.0 34.0 2 31.580333890301713 34.0 31.0 34.0 29.0 34.0 3 31.647358302042115 34.0 31.0 34.0 28.0 34.0 4 35.13922794083894 37.0 35.0 37.0 33.0 37.0 5 34.88265104706995 37.0 35.0 37.0 32.0 37.0 6 34.83706762269371 37.0 35.0 37.0 32.0 37.0 7 34.71018364655154 37.0 35.0 37.0 32.0 37.0 8 34.67494124289636 37.0 35.0 37.0 32.0 37.0 9 36.29998561675067 39.0 37.0 39.0 32.0 39.0 10-11 36.157378759919084 39.0 37.0 39.0 32.0 39.0 12-13 36.09210673289082 39.0 37.0 39.0 32.0 39.0 14-15 37.33275532562759 40.0 38.0 41.0 32.0 41.0 16-17 37.30855015316631 40.0 38.0 41.0 32.0 41.0 18-19 37.27526976243156 40.0 38.0 41.0 31.0 41.0 20-21 37.240668101931334 40.0 38.0 41.0 31.0 41.0 22-23 37.131504212455894 40.0 38.0 41.0 31.0 41.0 24-25 37.05883686181982 40.0 37.5 41.0 31.0 41.0 26-27 36.92056104618247 40.0 37.0 41.0 30.0 41.0 28-29 36.767752219457776 40.0 37.0 41.0 30.0 41.0 30-31 36.620313585438026 40.0 37.0 41.0 30.0 41.0 32-33 36.56088628358259 40.0 37.0 41.0 30.0 41.0 34-35 36.68567053484266 40.0 37.0 41.0 30.0 41.0 36-37 36.653097448044335 40.0 37.0 41.0 30.0 41.0 38-39 36.55593879009331 40.0 37.0 41.0 30.0 41.0 40-41 36.418673435974654 40.0 37.0 41.0 30.0 41.0 42-43 36.30365678812862 40.0 36.0 41.0 29.0 41.0 44-45 36.152744943675806 40.0 36.0 41.0 28.5 41.0 46-47 35.983706188469526 40.0 36.0 41.0 28.0 41.0 48-49 35.814419169199034 40.0 35.5 41.0 27.5 41.0 50-51 35.65192115837181 39.5 35.0 41.0 27.0 41.0 52-53 35.468433549388095 39.0 35.0 41.0 27.0 41.0 54-55 35.25741846686803 39.0 35.0 41.0 26.0 41.0 56-57 34.987256670614414 39.0 35.0 41.0 26.0 41.0 58-59 34.764389943660504 38.5 35.0 40.5 26.0 41.0 60-61 34.48668287077415 38.0 34.0 40.0 25.5 41.0 62-63 34.18851658205031 37.0 34.0 40.0 24.5 41.0 64-65 33.86984938136727 37.0 34.0 40.0 24.0 41.0 66-67 33.53262453751733 36.0 34.0 39.0 23.0 41.0 68-69 33.170354286973364 36.0 34.0 39.0 22.0 41.0 70-71 32.787675123711246 35.0 33.0 38.5 22.0 40.0 72-73 32.398704436467355 35.0 33.0 37.5 20.5 40.0 74-75 32.000426715814534 35.0 33.0 37.0 19.5 39.0 76-77 29.256959618262442 33.0 29.0 34.5 13.0 36.5 78-79 30.914748836333924 34.5 31.5 36.0 16.5 37.0 80-81 31.117107383197304 35.0 32.0 35.5 18.0 37.0 82-83 30.964466871092426 35.0 32.0 35.0 16.0 37.0 84-85 30.742044456481487 35.0 32.0 35.0 12.5 36.5 86-87 30.498907485104155 35.0 32.0 35.0 7.5 36.0 88-89 30.224877130327542 35.0 32.0 35.0 2.0 36.0 90-91 30.04732356802512 34.5 31.5 35.0 2.0 35.0 92-93 29.9104051715432 34.0 31.0 35.0 2.0 35.0 94-95 29.81663250644951 34.0 31.0 35.0 2.0 35.0 96-97 29.629212264627306 34.0 31.0 35.0 2.0 35.0 98-99 29.366902154121107 34.0 31.0 35.0 2.0 35.0 100-101 28.28862839651252 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 46466.0 3 16104.0 4 8775.0 5 6177.0 6 5538.0 7 5638.0 8 5944.0 9 6402.0 10 6999.0 11 7637.0 12 8404.0 13 9053.0 14 10014.0 15 11262.0 16 12215.0 17 13277.0 18 12304.0 19 10419.0 20 9682.0 21 9570.0 22 10184.0 23 11352.0 24 13294.0 25 15814.0 26 19134.0 27 22912.0 28 27661.0 29 33372.0 30 40604.0 31 50594.0 32 63852.0 33 85044.0 34 122493.0 35 185263.0 36 322386.0 37 624667.0 38 657116.0 39 86526.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.667647141076834 19.613829975929978 14.09166988787883 25.62685299511436 2 15.600388655542549 20.91158086407002 36.981186929544705 26.506843550842724 3 18.356694720734506 24.160673297628158 29.01185921958684 28.470772762050494 4 13.899669436220623 17.1758506728528 34.235902646461255 34.68857724446532 5 14.890916597505452 36.68965153078736 33.4725358232136 14.946896048493585 6 33.799494743156 34.528536606638724 16.79141246983684 14.880556180368432 7 28.939256690898908 31.72624503279845 20.449377770501133 18.88512050580151 8 26.896140162962396 34.26884969970544 19.50089897096515 19.33411116636701 9 26.433811040827003 16.016321927722643 19.524266377777575 38.025600653672775 10-11 25.824439341042044 25.39953801338096 27.169159281996595 21.606863363580405 12-13 26.346583498572286 22.96109605306671 27.012537758543093 23.67978268981791 14-15 23.657622514378772 24.657465858482915 24.4237635708669 27.261148056271413 16-17 23.737724007104422 27.598811390484162 25.407446482542873 23.256018119868546 18-19 23.69649944618572 26.715844023099727 26.904395263687704 22.68326126702685 20-21 24.1383175282025 25.69688577079181 27.047564581715523 23.117232119290165 22-23 24.089186296404254 25.52500893217135 26.717042582931484 23.668762188492913 24-25 23.906043847377674 25.885510687564008 26.55550850326669 23.652936961791628 26-27 23.574929789156112 26.202631469721492 26.6584305325313 23.564008208591094 28-29 23.626711093981175 26.405069610550086 26.53706999693 23.431149298538738 30-31 24.017104709916623 25.836115698969653 26.509392707810864 23.63738688330286 32-33 23.772908522769118 25.86310887340904 26.3363675578685 24.02761504595334 34-35 24.080430505241484 26.120766269335878 26.306143521896168 23.49265970352647 36-37 24.045960162325297 26.04914783426325 26.400736611194493 23.504155392216962 38-39 23.90897447961973 26.058184967480774 26.488841862696265 23.543998690203225 40-41 24.03717171624432 25.889483691946214 26.484216614917077 23.58912797689239 42-43 23.94267322691108 25.933566622174226 26.129976085789696 23.993784065125002 44-45 23.932016141126205 25.967656537400952 26.214620512145633 23.88570680932721 46-47 24.032564118259167 26.02558609291792 26.005596957825794 23.936252830997123 48-49 23.732598788191805 26.161896427222164 26.19590739757734 23.909597387008688 50-51 23.88348786596537 26.129117283745174 26.260141981039865 23.727252869249593 52-53 24.133850398557826 25.909481707462856 26.101325019485582 23.855342874493736 54-55 23.626101226794383 25.905731543572813 26.3152559360093 24.1529112936235 56-57 23.693718025572274 26.099032786113863 26.06860053335823 24.138648654955638 58-59 23.70227077269625 26.074959677295944 26.22877128227729 23.99399826773051 60-61 23.731327124599076 26.00040092549519 26.414658723649094 23.85361322625664 62-63 23.73764223422781 25.97325505831697 26.416880652089446 23.872222055365775 64-65 23.532091529091453 25.814330144158603 26.30758236575475 24.34599596099519 66-67 23.524864700935733 26.111126524356703 26.091495364386663 24.2725134103209 68-69 23.593149830291605 25.94691277269712 26.27100501309857 24.188932383912704 70-71 23.462784409998143 25.834636071922652 26.28194260806671 24.420636910012494 72-73 23.43080632843003 25.971847455266474 26.208964612646145 24.388381603657354 74-75 23.430314356106997 26.09365751151425 26.14087386995452 24.335154262424236 76-77 23.448224429217486 25.79483175074736 26.213252541534853 24.543691278500305 78-79 23.299906867284157 25.85410892125673 26.282718464737993 24.563265746721118 80-81 23.460983488598178 25.99198542526237 26.079058765893276 24.46797232024618 82-83 23.349624154364058 25.95333059513372 26.258690228702157 24.43835502180006 84-85 23.34893178836051 25.96054097263491 26.1652061211659 24.52532111783868 86-87 23.23710331797826 26.140044773133823 26.03221789719407 24.590634011693847 88-89 23.05742297348505 25.97753064108091 26.119920192813673 24.845126192620366 90-91 23.04805209581907 25.852774704079085 26.217909002699848 24.881264197402 92-93 23.04337533984012 25.702600974162102 26.38609894827771 24.867924737720067 94-95 22.982578858405383 25.695280077382236 26.351736098558685 24.970404965653692 96-97 22.898727426589073 25.531769192277025 26.397041833019884 25.17246154811402 98-99 22.722684009411967 25.575270291826808 26.28617901480384 25.41586668395739 100-101 22.684205633825446 25.583594066492406 26.34999462530742 25.38220567437473 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 72.0 1 55.0 2 51.0 3 74.0 4 66.0 5 68.0 6 132.0 7 327.0 8 513.0 9 585.0 10 550.0 11 432.5 12 394.0 13 414.0 14 448.5 15 513.5 16 604.5 17 703.0 18 772.5 19 860.5 20 1002.5 21 1110.0 22 1322.5 23 1666.5 24 1954.0 25 2451.0 26 3392.0 27 4820.5 28 6784.5 29 9668.5 30 13752.0 31 19133.0 32 26448.5 33 31579.5 34 34972.0 35 39701.0 36 46086.5 37 52844.0 38 59135.5 39 65089.0 40 69594.0 41 75416.0 42 81802.5 43 87636.5 44 93287.0 45 100093.0 46 104778.0 47 107741.5 48 111566.0 49 113474.5 50 114141.0 51 114276.0 52 113627.5 53 112150.0 54 109681.5 55 103765.5 56 94393.0 57 84318.0 58 75875.0 59 66552.0 60 55005.5 61 45433.0 62 37751.0 63 28747.5 64 20364.0 65 15266.0 66 11775.5 67 9100.5 68 7062.5 69 5381.5 70 4080.0 71 2979.5 72 2010.0 73 1423.0 74 1072.0 75 750.5 76 527.0 77 311.5 78 161.5 79 96.5 80 55.0 81 32.0 82 24.0 83 19.0 84 12.5 85 7.0 86 5.0 87 5.5 88 4.0 89 2.0 90 1.5 91 1.0 92 0.5 93 0.0 94 1.5 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14731354565457555 2 4.5903987220329955E-4 3 0.005814505047908461 4 0.005087691916919904 5 0.02650955261974055 6 0.0013771196166098988 7 1.5301329073443318E-4 8 0.0019891727795476313 9 0.0 10-11 0.09963077892945782 12-13 3.2515324281067056E-4 14-15 0.005451098482414182 16-17 1.9126661341804148E-4 18-19 3.2515324281067056E-4 20-21 8.415730990393826E-4 22-23 2.2951993610164978E-4 24-25 0.0014918795846607237 26-27 0.0023525793450419104 28-29 0.005527605127781399 30-31 0.014115476070251463 32-33 0.013752069504757183 34-35 0.011208223546297231 36-37 7.076864696467535E-4 38-39 2.2951993610164978E-4 40-41 0.004647778706058408 42-43 0.008606997603811867 44-45 0.007956691118190525 46-47 0.008874770862597125 48-49 0.011074336916904601 50-51 0.00539371849838877 52-53 0.0015110062460025279 54-55 8.415730990393826E-4 56-57 0.005699745079857636 58-59 0.009180797444065992 60-61 0.007650664536721659 62-63 0.01765390841848523 64-65 0.033835063913651535 66-67 0.03670406311492216 68-69 0.026719945894500392 70-71 0.04081629530341005 72-73 0.02585924613411921 74-75 0.024902913067029003 76-77 0.23455024803454427 78-79 0.06698156801899813 80-81 0.05401369162925492 82-83 0.019604827875349253 84-85 0.03285960418521953 86-87 0.08012158436081758 88-89 0.26272382019102175 90-91 0.31602982535062996 92-93 0.05135508570274414 94-95 0.0044182587699567585 96-97 0.009027784153331558 98-99 0.0012623596485590739 100-101 0.0018744128114968066 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2614152.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.19274129573077 #Duplication Level Percentage of deduplicated Percentage of total 1 78.36329372252003 47.95264759843531 2 12.163898701653899 14.886846127955646 3 3.974776375420859 7.296823873485332 4 1.7537640581836058 4.2927052122472125 5 0.998114978699123 3.053869583746463 6 0.6214893946219345 2.281838384588422 7 0.42873095797662225 1.8364655817853985 8 0.29629581050806547 1.450492230354313 9 0.2246113292207304 1.2370124664984932 >10 1.122968872622468 11.678390721151523 >50 0.036321287722726525 1.4928296886769719 >100 0.014040592657584295 1.5692488176113764 >500 0.0010665410840757948 0.4709030870527943 >1k 6.27377108273903E-4 0.49992662641088437 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.8253322683608296E-5 2 0.0 0.0 0.0 0.0 3.8253322683608296E-5 3 0.0 0.0 0.0 0.0 3.8253322683608296E-5 4 0.0 0.0 0.0 0.0 3.8253322683608296E-5 5 0.0 0.0 0.0 0.0 3.8253322683608296E-5 6 0.0 0.0 0.0 0.0 3.8253322683608296E-5 7 0.0 0.0 0.0 0.0 3.8253322683608296E-5 8 0.0 0.0 0.0 0.0 3.8253322683608296E-5 9 0.0 0.0 0.0 0.0 3.8253322683608296E-5 10-11 0.0 0.0 0.0 0.0 3.8253322683608296E-5 12-13 0.0 0.0 0.0 0.0 2.677732587852581E-4 14-15 0.0 0.0 0.0 0.0 3.6340656549427883E-4 16-17 0.0 0.0 0.0 0.0 4.207865495196913E-4 18-19 0.0 0.0 0.0 1.9126661341804148E-5 4.399132108614954E-4 20-21 0.0 0.0 0.0 5.7379984025412444E-5 4.5903987220329955E-4 22-23 0.0 0.0 0.0 1.1475996805082489E-4 5.355465175705162E-4 24-25 0.0 0.0 0.0 3.2515324281067056E-4 6.120531629377327E-4 26-27 0.0 0.0 0.0 6.503064856213411E-4 6.120531629377327E-4 28-29 1.9126661341804148E-5 0.0 0.0 0.002448212651750931 6.120531629377327E-4 30-31 3.8253322683608296E-5 0.0 0.0 0.010213637156523415 6.120531629377327E-4 32-33 3.8253322683608296E-5 0.0 0.0 0.030028858306632513 6.120531629377327E-4 34-35 3.8253322683608296E-5 0.0 0.0 0.0580876704950592 6.120531629377327E-4 36-37 3.8253322683608296E-5 0.0 0.0 0.0981580260061389 6.503064856213411E-4 38-39 3.8253322683608296E-5 0.0 0.0 0.1488819318846035 6.694331469631453E-4 40-41 3.8253322683608296E-5 0.0 0.0 0.21102445458412517 7.268131309885577E-4 42-43 3.8253322683608296E-5 0.0 0.0 0.2825964213251563 7.459397923303618E-4 44-45 3.8253322683608296E-5 0.0 0.0 0.38241846686803216 8.033197763557742E-4 46-47 3.8253322683608296E-5 0.0 0.0 0.49541878207541107 8.798264217229908E-4 48-49 3.8253322683608296E-5 0.0 0.0 0.6040008385128333 9.563330670902075E-4 50-51 3.8253322683608296E-5 0.0 0.0 0.7087958160045782 9.563330670902075E-4 52-53 3.8253322683608296E-5 1.9126661341804148E-5 0.0 0.8277445228892581 0.0010710930351410324 54-55 3.8253322683608296E-5 3.8253322683608296E-5 0.0 0.9843727526172923 0.0011667263418500531 56-57 3.8253322683608296E-5 3.8253322683608296E-5 0.0 1.17347805330371 0.0012049796645336613 58-59 3.8253322683608296E-5 3.8253322683608296E-5 0.0 1.3516811570252991 0.0012241063258754655 60-61 3.8253322683608296E-5 3.8253322683608296E-5 0.0 1.5265562216734145 0.0012623596485590739 62-63 3.8253322683608296E-5 3.8253322683608296E-5 0.0 1.7166369820882643 0.0013006129712426822 64-65 3.8253322683608296E-5 3.8253322683608296E-5 0.0 1.9544961425349405 0.0013006129712426822 66-67 3.8253322683608296E-5 3.8253322683608296E-5 0.0 2.251820093093286 0.0013006129712426822 68-69 3.8253322683608296E-5 3.8253322683608296E-5 0.0 2.5604861538273216 0.0013006129712426822 70-71 3.8253322683608296E-5 3.8253322683608296E-5 0.0 2.849413500056615 0.0013006129712426822 72-73 7.650664536721659E-5 3.8253322683608296E-5 0.0 3.155325321557431 0.0014727529233189195 74-75 7.650664536721659E-5 3.8253322683608296E-5 0.0 3.5105456759974167 0.0015683862300279402 76-77 7.650664536721659E-5 3.8253322683608296E-5 0.0 3.9413928493828974 0.0015683862300279402 78-79 9.563330670902074E-5 3.8253322683608296E-5 0.0 4.4166712570653885 0.0015875128913697444 80-81 1.1475996805082489E-4 3.8253322683608296E-5 0.0 4.875864142559422 0.0016257662140533526 82-83 1.1475996805082489E-4 3.8253322683608296E-5 0.0 5.335898601152496 0.0017405261821041777 84-85 1.1475996805082489E-4 3.8253322683608296E-5 0.0 5.844151372988257 0.00179790616612959 86-87 1.1475996805082489E-4 3.8253322683608296E-5 0.0 6.439468707251912 0.00179790616612959 88-89 1.1475996805082489E-4 3.8253322683608296E-5 0.0 7.0927589520425744 0.00179790616612959 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2760 0.0 55.964874 1 GTATCAA 5055 0.0 39.770447 1 TATCAAC 6510 0.0 30.542816 2 TCAACGC 6580 0.0 30.290009 4 ATCAACG 6665 0.0 29.903715 3 CAACGCA 6780 0.0 29.308666 5 AACGCAG 7160 0.0 27.816908 6 GTGGTAT 1510 0.0 27.383162 1 TGGTATC 1625 0.0 23.946196 2 GTACATG 7545 0.0 23.558825 1 ACGCAGA 8495 0.0 22.829933 7 TACATGG 7725 0.0 22.298937 2 CGCAGAG 8580 0.0 22.271355 8 ACATGGG 7905 0.0 21.430998 3 CATGGGG 6840 0.0 19.287 4 GCAGAGT 9405 0.0 18.902561 9 AGAGTAC 8030 0.0 17.965982 10-11 GAGTACT 4555 0.0 17.655266 12-13 ATGGGGG 4295 0.0 17.266762 5 CAGAGTA 8870 0.0 17.122025 10-11 >>END_MODULE