##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921359_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2283190 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.529241981613445 31.0 31.0 34.0 27.0 34.0 2 30.591167620741157 33.0 31.0 34.0 27.0 34.0 3 30.61882848120393 33.0 31.0 34.0 26.0 34.0 4 34.0921053438391 37.0 35.0 37.0 30.0 37.0 5 34.08753148007831 37.0 35.0 37.0 30.0 37.0 6 34.14076358077952 37.0 35.0 37.0 30.0 37.0 7 34.0676741751672 37.0 35.0 37.0 30.0 37.0 8 34.03540879208476 37.0 35.0 37.0 30.0 37.0 9 35.60412887232337 39.0 37.0 39.0 30.0 39.0 10-11 35.50589745049689 39.0 37.0 39.0 30.0 39.0 12-13 35.4022873698641 39.0 37.0 39.0 30.0 39.0 14-15 36.53640235810423 40.0 37.0 41.0 29.5 41.0 16-17 36.47446292249002 40.0 37.0 41.0 29.0 41.0 18-19 36.44308774127427 40.0 37.0 41.0 29.0 41.0 20-21 36.39298744300737 40.0 37.0 41.0 29.0 41.0 22-23 36.27648312229819 40.0 37.0 41.0 28.0 41.0 24-25 36.17674525554159 40.0 36.0 41.0 27.0 41.0 26-27 36.02542495368323 40.0 36.0 41.0 27.0 41.0 28-29 35.881860029169715 40.0 36.0 41.0 27.0 41.0 30-31 35.722680328838166 40.0 36.0 41.0 27.0 41.0 32-33 35.519841975481675 39.5 35.0 41.0 25.5 41.0 34-35 35.35270367336928 39.0 35.0 41.0 25.0 41.0 36-37 35.17513895032827 39.0 35.0 41.0 25.0 41.0 38-39 35.39262391653783 39.5 35.0 41.0 25.5 41.0 40-41 35.49627472965456 40.0 35.0 41.0 25.0 41.0 42-43 35.307476381729074 40.0 35.0 41.0 24.0 41.0 44-45 35.15752368396848 40.0 35.0 41.0 24.0 41.0 46-47 34.96985708591926 40.0 35.0 41.0 23.0 41.0 48-49 34.80145388688633 39.5 35.0 41.0 22.0 41.0 50-51 33.07449971312068 37.0 32.5 39.5 18.0 40.0 52-53 33.226565463233456 37.5 33.5 39.5 17.5 40.0 54-55 34.08330230948804 39.0 34.0 40.5 18.5 41.0 56-57 34.096351157809906 39.0 34.0 41.0 18.0 41.0 58-59 33.918107122052916 38.0 34.0 41.0 17.5 41.0 60-61 33.675274506282875 38.0 34.0 40.0 14.5 41.0 62-63 33.38605197114563 37.0 34.0 40.0 12.5 41.0 64-65 33.09510312326175 37.0 33.0 40.0 9.5 41.0 66-67 32.76088104800739 36.0 33.0 39.5 7.5 41.0 68-69 32.39803389117857 36.0 33.0 39.0 6.0 41.0 70-71 32.017790678830934 35.0 32.5 39.0 2.0 40.5 72-73 31.665924868276402 35.0 32.0 37.5 2.0 40.0 74-75 31.27530845001949 35.0 32.0 37.0 2.0 39.0 76-77 30.902459278465656 35.0 32.0 36.5 2.0 39.0 78-79 30.56096185599972 35.0 31.5 36.0 2.0 38.5 80-81 30.21807471125925 35.0 31.0 36.0 2.0 37.0 82-83 29.921157678511207 35.0 31.0 35.0 2.0 37.0 84-85 29.689443497913008 35.0 31.0 35.0 2.0 36.5 86-87 29.464285276302014 35.0 31.0 35.0 2.0 36.0 88-89 29.259566220945256 35.0 31.0 35.0 2.0 36.0 90-91 29.005953512410265 35.0 30.0 35.0 2.0 35.5 92-93 28.820423836824794 34.0 30.0 35.0 2.0 35.0 94-95 28.616245472343522 34.0 30.0 35.0 2.0 35.0 96-97 28.364783701750618 34.0 30.0 35.0 2.0 35.0 98-99 28.128501351179708 34.0 29.5 35.0 2.0 35.0 100-101 27.093586385714723 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 72758.0 3 12773.0 4 8685.0 5 6671.0 6 6274.0 7 6362.0 8 6640.0 9 7350.0 10 7915.0 11 8573.0 12 8713.0 13 8959.0 14 9837.0 15 11559.0 16 12193.0 17 13289.0 18 11837.0 19 10073.0 20 9793.0 21 10115.0 22 10819.0 23 12356.0 24 14434.0 25 17183.0 26 20337.0 27 24125.0 28 28316.0 29 33230.0 30 40480.0 31 48794.0 32 60886.0 33 79083.0 34 112019.0 35 163369.0 36 268048.0 37 482500.0 38 519170.0 39 97656.0 40 16.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.562729866509265 18.30873463156285 13.711733100908797 24.41680240101909 2 16.929886452777765 19.791793572815276 38.0185549571185 25.259765017288455 3 19.54103828814617 23.34877549446466 29.44724600186498 27.66294021552419 4 14.354779477821571 16.52064812599314 35.101858011430814 34.02271438475447 5 15.185145909980843 36.14841119464071 33.49935059585679 15.167092299521666 6 33.40129113991701 33.93445473935611 17.180387674901183 15.483866445825697 7 28.679232885353333 31.708179285451454 20.725894061782693 18.88669376741252 8 26.825652577322295 33.37871782673111 20.039794665832574 19.755834930114013 9 26.7458940304804 15.789457544597152 19.79648777573002 37.66816064919243 10-11 25.756318930627515 25.21721683395143 27.191252229556913 21.83521200586415 12-13 26.32495392783674 23.12744831955166 26.875936037620907 23.671661714990687 14-15 23.989731684724074 24.805820435498557 24.529525897765545 26.674921982011824 16-17 23.61896525323872 27.36682861624784 25.755218892613605 23.258987237899838 18-19 23.558946541589982 26.53940393042657 27.249279675885912 22.652369852097536 20-21 24.166238602447905 25.502237069083538 27.339755209331617 22.991769119136933 22-23 24.206565520239216 25.381555792374055 26.846585431689352 23.565293255697373 24-25 23.914076993926052 25.788842023901438 26.83762990720382 23.459451074968694 26-27 23.49123843138217 26.020364798104506 27.018451080146576 23.469945690366746 28-29 23.557263181366466 26.209362021271726 26.928247079173513 23.305127718188295 30-31 24.02269667951442 25.698205212780824 26.871258304718275 23.40783980298648 32-33 23.732214959714547 25.733719148578295 26.666018384919916 23.868047506787246 34-35 24.087465587363745 25.989036139564732 26.635150495739072 23.28834777733245 36-37 23.98360950842979 25.901943496559365 26.690830618885375 23.423616376125473 38-39 23.738979243077647 26.020079092553445 26.814158342354638 23.42678332201427 40-41 23.964951762573573 25.7777425427558 26.80153406666953 23.455771628001095 42-43 23.873095197913756 25.764504937447153 26.516539246433883 23.845860618205208 44-45 23.831987413360995 25.882099209517474 26.551823020025456 23.734090357096076 46-47 23.985479914752425 25.933939492477204 26.260277179685836 23.820303413084535 48-49 23.658079301572187 26.14860899166569 26.398517662004554 23.794794044757566 50-51 23.782339254037367 26.070164237280142 26.526026633843347 23.621469874839146 52-53 24.018353829481498 25.909534630982662 26.41307569923399 23.659035840301847 54-55 23.558375654565715 25.91489998468493 26.566339052861572 23.960385307887787 56-57 23.66047025928534 26.091751711558857 26.300458866082245 23.94731916307356 58-59 23.654861431110525 26.032124284115593 26.509226954556425 23.803787330217453 60-61 23.74916969730351 25.98452998229346 26.744623138580398 23.521677181822632 62-63 23.704818437700304 25.901985477298155 26.765048524941403 23.628147560060135 64-65 23.514839807149325 25.791945361755204 26.65848310142786 24.03473172966761 66-67 23.513164702387197 25.989771733420863 26.461887770796956 24.035175793394984 68-69 23.580893720453343 25.9572864972128 26.564181935228504 23.897637847105354 70-71 23.488520913237362 25.859541196310143 26.544901392680174 24.10703649777232 72-73 23.40796122503067 26.01255114094101 26.54491275982933 24.034574874198988 74-75 23.47802354390717 26.083509194857346 26.484997818139693 23.95346944309579 76-77 23.49317262380104 25.854628662694267 26.41404789693997 24.238150816564723 78-79 23.435391944215 25.933107508485985 26.524471331977452 24.107029215321564 80-81 23.541949685396563 26.105896372897796 26.37368787213077 23.978466069574875 82-83 23.537561542570536 26.078665637244598 26.506660006733085 23.877112813451777 84-85 23.445325096069592 26.139157879352265 26.409322398593943 24.006194625984204 86-87 23.403970454574885 26.270718638274857 26.317842243689398 24.007468663460855 88-89 23.252566599906718 26.11809377486351 26.436785645696727 24.192553979533045 90-91 23.44287251288251 25.982237744003854 26.43162756152196 24.143262181591677 92-93 23.43075956640856 25.888862013426706 26.620074565506453 24.06030385465828 94-95 23.380852061929104 25.798935652480854 26.650286348249256 24.169925937340782 96-97 23.409337814678903 25.706770114304167 26.61910048058634 24.264791590430594 98-99 23.228657030915617 25.74246863991045 26.508829113576756 24.520045215597186 100-101 23.3671269310183 25.71962494550541 26.658863641252832 24.25438448222346 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 56.5 2 58.5 3 85.5 4 84.0 5 89.0 6 151.5 7 375.5 8 591.0 9 696.5 10 679.5 11 580.0 12 593.5 13 659.0 14 740.0 15 837.5 16 940.5 17 1068.5 18 1226.5 19 1425.0 20 1590.5 21 1762.0 22 2004.0 23 2303.5 24 2734.0 25 3377.5 26 4397.5 27 5918.5 28 7967.0 29 10674.0 30 14274.0 31 18855.0 32 24835.5 33 29131.0 34 32368.0 35 37325.0 36 43105.5 37 48763.5 38 53721.5 39 58765.0 40 62271.5 41 65494.5 42 69547.5 43 73409.0 44 77761.0 45 83580.0 46 88601.0 47 91736.5 48 94532.0 49 96119.0 50 96278.5 51 94940.5 52 93688.0 53 93403.0 54 91599.0 55 87345.0 56 81507.5 57 73831.5 58 66105.5 59 57711.0 60 47990.5 61 40007.5 62 33495.0 63 26141.0 64 19273.0 65 14573.5 66 11133.0 67 8799.0 68 6943.0 69 5335.0 70 4072.0 71 2972.0 72 2104.5 73 1535.0 74 1194.5 75 887.5 76 647.5 77 450.5 78 295.0 79 206.5 80 142.0 81 106.5 82 98.0 83 81.5 84 60.0 85 50.5 86 45.0 87 38.0 88 34.0 89 31.0 90 26.0 91 20.5 92 17.5 93 19.0 94 17.5 95 9.5 96 6.5 97 9.0 98 7.0 99 3.5 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.050762310626798465 2 0.057813848168571165 3 0.049316964422584195 4 0.056412300334181556 5 0.04809061006749329 6 0.017563146299694726 7 0.015329429438636294 8 0.020672830557246658 9 0.020891822406370036 10-11 0.022140075946373274 12-13 0.02757107380463299 14-15 0.04484953070046733 16-17 0.0301989759941135 18-19 0.02351972459585054 20-21 0.027483477064983643 22-23 0.04756502962959718 24-25 0.04309759590748032 26-27 0.03162242301341544 28-29 0.021395503659353797 30-31 0.013183309317227212 32-33 0.010161221799324629 34-35 0.010292616908798654 36-37 0.0016205396835129798 38-39 0.007380025315457759 40-41 0.004730223941064914 42-43 0.21183081565704126 44-45 0.18682194648715175 46-47 0.193391701960853 48-49 0.19085139651102187 50-51 0.18931845356715823 52-53 0.1939610807685738 54-55 0.19223104516049913 56-57 0.20315873843175558 58-59 0.1988445990040251 60-61 0.20381571397912568 62-63 0.20232656940508673 64-65 0.20320253680158026 66-67 0.19301941581734328 68-69 0.19179306146225236 70-71 0.17622274098958035 72-73 0.18369036304468747 74-75 0.18270489972363227 76-77 0.18088726737590827 78-79 0.207078692531064 80-81 0.215706971386525 82-83 0.2141302300728367 84-85 0.20863353465983997 86-87 0.22505792334409314 88-89 0.2245761412760217 90-91 0.2234154844756678 92-93 0.22744493449953795 94-95 0.23898580494833982 96-97 0.23876681309921646 98-99 0.2284084986356808 100-101 0.23830693021605737 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2283190.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.38741204494497 #Duplication Level Percentage of deduplicated Percentage of total 1 79.80720958564133 51.38579687747969 2 11.875529598178362 15.292692349796996 3 3.590621929301964 6.935725609787424 4 1.595802337482997 4.109983305832162 5 0.8792180636861392 2.8305287871959055 6 0.5149245083020557 1.9892793892851086 7 0.35035733904434685 1.5791021646413193 8 0.2617159924910296 1.3480972357817316 9 0.18099660901386805 1.0488512918982351 >10 0.8972818263382117 9.749570413511943 >50 0.03274306420566779 1.4176634692255803 >100 0.01202976417601625 1.4302046259636552 >500 0.0012964461140273248 0.5863446400530383 >1k 2.729360240055266E-4 0.2961598395470641 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2441 0.10691182074203198 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.759673964935025E-5 2 0.0 0.0 0.0 4.3798369824675126E-5 8.759673964935025E-5 3 0.0 0.0 0.0 4.3798369824675126E-5 8.759673964935025E-5 4 0.0 0.0 0.0 1.3139510947402538E-4 8.759673964935025E-5 5 0.0 0.0 0.0 1.3139510947402538E-4 8.759673964935025E-5 6 0.0 0.0 0.0 1.3139510947402538E-4 8.759673964935025E-5 7 0.0 0.0 0.0 1.3139510947402538E-4 8.759673964935025E-5 8 0.0 0.0 0.0 1.3139510947402538E-4 1.3139510947402538E-4 9 0.0 0.0 0.0 1.751934792987005E-4 1.751934792987005E-4 10-11 0.0 0.0 0.0 2.6279021894805077E-4 2.1899184912337562E-4 12-13 0.0 0.0 0.0 2.6279021894805077E-4 2.8468940386038835E-4 14-15 0.0 0.0 0.0 2.6279021894805077E-4 3.284877736850634E-4 16-17 0.0 0.0 0.0 3.065885887727259E-4 3.941853284220761E-4 18-19 0.0 0.0 0.0 3.50386958597401E-4 3.941853284220761E-4 20-21 0.0 0.0 0.0 3.941853284220761E-4 4.3798369824675124E-4 22-23 0.0 0.0 0.0 4.3798369824675124E-4 5.255804378961014E-4 24-25 0.0 0.0 0.0 7.226731021071396E-4 5.693788077207766E-4 26-27 0.0 0.0 0.0 0.0010949592456168781 5.912779926331142E-4 28-29 0.0 0.0 0.0 0.0027811964838668707 6.131771775454518E-4 30-31 0.0 0.0 0.0 0.00996412913511359 6.131771775454518E-4 32-33 0.0 4.3798369824675126E-5 0.0 0.02722068684603559 6.131771775454518E-4 34-35 0.0 4.3798369824675126E-5 0.0 0.054485172061895855 6.131771775454518E-4 36-37 0.0 8.759673964935025E-5 0.0 0.09118820597497361 6.350763624577893E-4 38-39 0.0 8.759673964935025E-5 0.0 0.14173152475264872 7.445722870194772E-4 40-41 0.0 8.759673964935025E-5 0.0 0.19812192590191793 7.445722870194772E-4 42-43 0.0 8.759673964935025E-5 0.0 0.26828691436104746 7.445722870194772E-4 44-45 0.0 8.759673964935025E-5 0.0 0.36488421900936846 8.321690266688274E-4 46-47 0.0 8.759673964935025E-5 0.0 0.47464293379000433 9.197657663181777E-4 48-49 0.0 1.3139510947402538E-4 0.0 0.5772625142892183 9.635641361428527E-4 50-51 0.0 1.3139510947402538E-4 0.0 0.6753927618814027 0.0010073625059675278 52-53 0.0 1.3139510947402538E-4 0.0 0.7862464359076555 0.0010511608757922028 54-55 0.0 1.3139510947402538E-4 0.0 0.9323577976427717 0.0010949592456168781 56-57 0.0 1.3139510947402538E-4 0.0 1.117581103631323 0.0011168584305292157 58-59 0.0 1.3139510947402538E-4 0.0 1.2955119810440656 0.0011825559852662285 60-61 0.0 1.3139510947402538E-4 0.0 1.4640481081294154 0.0012263543550909035 62-63 0.0 1.3139510947402538E-4 0.0 1.6382999224768855 0.0012263543550909035 64-65 0.0 1.3139510947402538E-4 0.0 1.8592188998725467 0.0012263543550909035 66-67 0.0 1.3139510947402538E-4 0.0 2.14320752981574 0.0012263543550909035 68-69 0.0 1.3139510947402538E-4 0.0 2.438605635098262 0.001248253540003241 70-71 0.0 1.3139510947402538E-4 0.0 2.7171632671831953 0.0012701527249155786 72-73 0.0 1.3139510947402538E-4 0.0 3.000056937880772 0.0013358502796525914 74-75 0.0 1.3139510947402538E-4 0.0 3.3239896811040692 0.001401547834389604 76-77 0.0 1.3139510947402538E-4 0.0 3.7309422343300382 0.001445346204214279 78-79 0.0 1.3139510947402538E-4 0.0 4.183904975056828 0.001445346204214279 80-81 0.0 1.3139510947402538E-4 0.0 4.624626071417621 0.0014672453891266166 82-83 0.0 1.3139510947402538E-4 0.0 5.0561276109303215 0.0015329429438636294 84-85 0.0 1.3139510947402538E-4 0.0 5.5278579531269845 0.0015329429438636294 86-87 0.0 1.3139510947402538E-4 0.0 6.083111786579304 0.0015329429438636294 88-89 0.0 1.3139510947402538E-4 0.0 6.710085450619528 0.0015329429438636294 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3400 0.0 60.434208 1 GTATCAA 5515 0.0 37.0012 2 TCAACGC 6910 0.0 30.284811 5 ATCAACG 6985 0.0 30.097483 4 CAACGCA 7065 0.0 29.679098 6 TATCAAC 6920 0.0 29.419453 3 GTGGTAT 1640 0.0 28.935434 1 TGGTATC 1575 0.0 28.624369 2 AACGCAG 7450 0.0 28.150898 7 ACGCAGA 8525 0.0 23.65592 8 GTACATG 7790 0.0 23.331097 1 CGCAGAG 8625 0.0 23.162092 9 TACATGG 7980 0.0 21.944027 2 ACATGGG 8130 0.0 21.246832 3 CAGAGTA 8720 0.0 20.297937 10-11 GAGTACT 4385 0.0 20.236544 12-13 GCAGAGT 9405 0.0 19.222992 9 CATGGGG 6680 0.0 18.897226 4 GTACTTT 4635 0.0 18.683508 14-15 AGAGTAC 8335 0.0 16.96564 10-11 >>END_MODULE