##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921359_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2283190 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.469392823199122 33.0 31.0 34.0 30.0 34.0 2 31.601260517083553 34.0 31.0 34.0 29.0 34.0 3 31.662148134846422 34.0 31.0 34.0 28.0 34.0 4 35.15923904712267 37.0 35.0 37.0 33.0 37.0 5 34.90221838743162 37.0 35.0 37.0 32.0 37.0 6 34.86433673938656 37.0 35.0 37.0 32.0 37.0 7 34.741080242993355 37.0 35.0 37.0 32.0 37.0 8 34.70598504723654 37.0 35.0 37.0 32.0 37.0 9 36.32942330686452 39.0 37.0 39.0 32.0 39.0 10-11 36.191912412020024 39.0 37.0 39.0 32.0 39.0 12-13 36.13023072981224 39.0 37.0 39.0 32.0 39.0 14-15 37.37046938712941 40.0 38.0 41.0 32.0 41.0 16-17 37.33878170454496 40.0 38.0 41.0 32.0 41.0 18-19 37.3176242450256 40.0 38.0 41.0 31.5 41.0 20-21 37.28430507316518 40.0 38.0 41.0 31.0 41.0 22-23 37.17519413627424 40.0 38.0 41.0 31.0 41.0 24-25 37.10234299379377 40.0 38.0 41.0 31.0 41.0 26-27 36.95769734450484 40.0 37.0 41.0 30.5 41.0 28-29 36.80352598776274 40.0 37.0 41.0 30.0 41.0 30-31 36.6526368808553 40.0 37.0 41.0 30.0 41.0 32-33 36.58189134500414 40.0 37.0 41.0 30.0 41.0 34-35 36.70117817614828 40.0 37.0 41.0 30.0 41.0 36-37 36.66366793827933 40.0 37.0 41.0 30.0 41.0 38-39 36.5661986080878 40.0 37.0 41.0 30.0 41.0 40-41 36.42298713641878 40.0 36.5 41.0 30.0 41.0 42-43 36.293733767229185 40.0 36.0 41.0 29.5 41.0 44-45 36.12673321098988 40.0 36.0 41.0 28.5 41.0 46-47 35.93418528462371 40.0 36.0 41.0 28.0 41.0 48-49 35.750294106053374 40.0 35.0 41.0 27.0 41.0 50-51 35.58266153933751 40.0 35.0 41.0 27.0 41.0 52-53 35.405720067099104 39.0 35.0 41.0 26.0 41.0 54-55 35.18898033015211 39.0 35.0 41.0 26.0 41.0 56-57 34.92231023261314 39.0 35.0 41.0 25.5 41.0 58-59 34.69830281316929 38.5 35.0 40.5 25.0 41.0 60-61 34.424177357118765 38.0 34.0 40.0 24.5 41.0 62-63 34.125809503370284 37.5 34.0 40.0 23.5 41.0 64-65 33.81497203474086 37.0 34.0 40.0 23.0 41.0 66-67 33.48424047056969 36.5 34.0 39.0 22.5 41.0 68-69 33.122566891060316 36.0 34.0 39.0 22.0 41.0 70-71 32.74349835099137 35.0 33.0 39.0 21.5 40.0 72-73 32.35066004143326 35.0 33.0 37.5 20.0 40.0 74-75 31.946147057406527 35.0 33.0 37.0 18.5 39.0 76-77 29.213878170454496 33.0 28.5 34.5 11.0 36.5 78-79 30.86729729019486 34.5 31.5 36.0 13.5 37.5 80-81 31.061864321409956 35.0 32.0 36.0 14.5 37.0 82-83 30.901162189743296 35.0 32.0 35.0 12.0 37.0 84-85 30.675507732602192 35.0 32.0 35.0 8.5 36.5 86-87 30.435951672878737 35.0 32.0 35.0 6.0 36.0 88-89 30.158522067808633 35.0 32.0 35.0 2.0 36.0 90-91 29.973351319863873 35.0 31.0 35.0 2.0 35.0 92-93 29.831694909315473 34.0 31.0 35.0 2.0 35.0 94-95 29.73789719646635 34.0 31.0 35.0 2.0 35.0 96-97 29.551901944209636 34.0 31.0 35.0 2.0 35.0 98-99 29.287408187667253 34.0 31.0 35.0 2.0 35.0 100-101 28.216763607058546 33.5 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 40561.0 3 13675.0 4 7481.0 5 5397.0 6 4924.0 7 4844.0 8 5041.0 9 5574.0 10 6036.0 11 6673.0 12 7272.0 13 8050.0 14 8807.0 15 10349.0 16 11864.0 17 13287.0 18 11795.0 19 9711.0 20 9055.0 21 8654.0 22 8938.0 23 9910.0 24 11617.0 25 13702.0 26 16635.0 27 20204.0 28 24095.0 29 28968.0 30 35152.0 31 43603.0 32 55279.0 33 73479.0 34 106705.0 35 159436.0 36 277803.0 37 537611.0 38 581172.0 39 79829.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.52838759711685 19.739591740769075 14.394348799505908 25.33767186260817 2 15.91036007251293 21.01504087064571 36.78187299375126 26.292726063090104 3 18.314527997757377 24.375394211227135 29.224060901254468 28.086016889761023 4 13.941534033023434 17.628572654970903 34.202003761542386 34.22788955046327 5 14.975297462190461 36.50459856678403 33.497535003476365 15.022568967549141 6 33.42804096240003 34.47338718543146 16.981937808316257 15.116634043852246 7 28.547264374521774 31.947858893854164 20.613405197730017 18.89147153389404 8 26.792128549447536 33.98030867179674 19.75746527694133 19.47009750181439 9 26.477472308480678 15.90975783881324 19.79116937267595 37.821600480030135 10-11 25.690442901480164 25.52590193919832 27.111554212805434 21.672100946516075 12-13 26.209751152610615 23.28180374226985 26.954215084926265 23.55423002019327 14-15 23.797352365129818 24.93845421696747 24.560517884686604 26.70367553321611 16-17 23.570382572274443 27.61450593566587 25.65682787171192 23.158283620347763 18-19 23.463681890130722 26.70529251668502 27.276051972988625 22.55497362019564 20-21 24.023756365854165 25.65939354255199 27.388518851469062 22.928331240124784 22-23 24.08942949845479 25.487520935675796 26.88125442364698 23.54179514222244 24-25 23.740778115906227 25.895295809835154 26.915747325193724 23.44817874906489 26-27 23.39078690160259 26.154790880370232 27.073928253411232 23.380493964615948 28-29 23.43852146034459 26.305624110696435 27.01662895008468 23.2392254788743 30-31 23.93642081239343 25.777737866172252 26.921716427799357 23.364124893634962 32-33 23.646284780728394 25.852306763631557 26.653968918699007 23.84743953694105 34-35 23.903134757995684 26.13697863269297 26.70180758845041 23.258079020860933 36-37 23.855114040754653 25.999145926177363 26.846409057562386 23.2993309755056 38-39 23.656346075977584 26.110788584287793 26.86497576960971 23.367889570124913 40-41 23.911875618274266 25.88947725396763 26.800225223202894 23.398421904555207 42-43 23.818369728784553 25.91578495055082 26.446052026707832 23.81979329395679 44-45 23.773936727058018 26.015682011109952 26.50017652227466 23.710204739557373 46-47 23.9100506225873 26.07428997189191 26.21439237345339 23.801267032067397 48-49 23.566559662152795 26.2645014040099 26.383843888028757 23.785095045808546 50-51 23.67804436832786 26.207777104944157 26.464320168546646 23.649858358181334 52-53 23.991103521208963 26.04950921982585 26.251423197901318 23.70796406106387 54-55 23.521901566681414 26.060630614452712 26.46587858109558 23.951589237770293 56-57 23.611838693400426 26.21470958224415 26.1981528267375 23.97529889761793 58-59 23.61456876219486 26.13992979791111 26.395275824738757 23.850225615155278 60-61 23.654398814198604 26.1235700366139 26.636663917375852 23.585367231811645 62-63 23.588726943860543 26.06315439944576 26.628388618128717 23.719730038564983 64-65 23.40674059239014 25.88358385387891 26.523354339174748 24.1863212145562 66-67 23.40391645171735 26.180475927794554 26.237523117913735 24.178084502574354 68-69 23.432081241402273 26.104035784068902 26.37699445364456 24.086888520884262 70-71 23.37094854031118 25.971471799768036 26.362360898295663 24.29521876162513 72-73 23.304437159858452 26.135575807824203 26.301089000579385 24.258898031737967 74-75 23.321292379633725 26.158396916885003 26.195919481351854 24.324391222129417 76-77 23.234815256929856 25.897659181353355 26.31923351398505 24.54829204773174 78-79 23.206607549638253 26.00317974082154 26.30550713140701 24.4847055781332 80-81 23.300154627508096 26.14992842698665 26.1646746807699 24.385242264735354 82-83 23.224935246992338 26.054814173926854 26.36094120481664 24.35930937426417 84-85 23.09951179717611 26.050591184133914 26.289851313477207 24.56004570521277 86-87 23.017127487877858 26.259094348025435 26.141291912462815 24.582486251633892 88-89 22.953700672466297 26.060544581988214 26.196148847638202 24.78960589790729 90-91 23.01022714840635 25.92028738124456 26.235862813768534 24.833622656580555 92-93 22.898476292057975 25.836448657514747 26.375493591364414 24.889581459062864 94-95 22.76286572715747 25.71743810914376 26.47709456317947 25.042601600519298 96-97 22.730933264591823 25.64234366215445 26.45131942310569 25.17540365014804 98-99 22.53816584510813 25.658752417974995 26.311706951832775 25.491374785084098 100-101 22.502240862067797 25.629352106716937 26.35720250188171 25.511204529333558 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 85.0 1 63.5 2 47.0 3 56.5 4 59.5 5 72.5 6 118.0 7 306.0 8 483.0 9 556.5 10 516.5 11 438.5 12 447.5 13 491.5 14 586.0 15 667.5 16 724.0 17 839.5 18 972.5 19 1103.5 20 1230.5 21 1405.5 22 1681.5 23 1975.0 24 2409.0 25 3073.0 26 4142.0 27 5807.5 28 7990.0 29 10923.0 30 14681.5 31 19267.0 32 25174.0 33 29599.0 34 32818.0 35 37371.0 36 43184.5 37 48825.0 38 53605.0 39 58508.5 40 62431.0 41 65654.0 42 69374.0 43 73508.5 44 77962.5 45 83668.5 46 88374.0 47 92057.0 48 95466.0 49 97016.0 50 96983.5 51 95279.0 52 94448.5 53 94506.5 54 93030.5 55 88569.0 56 81878.0 57 74111.5 58 66093.0 59 57766.5 60 48208.5 61 39977.5 62 33220.5 63 25555.5 64 18480.0 65 13848.5 66 10702.0 67 8400.0 68 6541.5 69 5001.5 70 3702.0 71 2703.0 72 1979.0 73 1405.0 74 1012.5 75 742.5 76 511.0 77 297.0 78 164.5 79 98.5 80 61.5 81 39.5 82 27.5 83 18.5 84 15.0 85 8.5 86 6.0 87 5.0 88 3.0 89 1.5 90 1.5 91 2.0 92 2.0 93 1.5 94 3.0 95 2.5 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15162995633302528 2 4.8178206807142636E-4 3 0.006569755473701269 4 0.0036790630652727106 5 0.027636771359370003 6 0.0010073625059675278 7 4.3798369824675126E-5 8 0.0023213136007077815 9 0.0 10-11 0.10069245222692812 12-13 1.5329429438636294E-4 14-15 0.00584708237159413 16-17 2.1899184912337563E-5 18-19 1.751934792987005E-4 20-21 5.474796228084391E-4 22-23 2.6279021894805077E-4 24-25 0.0014891445740389544 26-27 0.003109684257551934 28-29 0.006723049768087632 30-31 0.01609590091056811 32-33 0.016227296020042137 34-35 0.012548232954769423 36-37 6.569755473701268E-4 38-39 1.5329429438636294E-4 40-41 0.005321501933698028 42-43 0.008299791081775938 44-45 0.008409287006337625 46-47 0.009504246251954502 48-49 0.01158466881862657 50-51 0.006241267700016205 52-53 0.0017300356080746677 54-55 8.759673964935026E-4 56-57 0.0058689815565064665 58-59 0.009175758478269439 60-61 0.007752311458967497 62-63 0.018373416141451215 64-65 0.03543288118816218 66-67 0.03806078337764268 68-69 0.026717005593051825 70-71 0.04191503992221409 72-73 0.025950534121120014 74-75 0.02468038139620443 76-77 0.23732146689500214 78-79 0.06821596100193152 80-81 0.054945054945054944 82-83 0.020913721591282373 84-85 0.032279398560785565 86-87 0.08006342003950613 88-89 0.26171715888734626 90-91 0.3148664806695895 92-93 0.052163858461188074 94-95 0.005190106824224002 96-97 0.010577306312659043 98-99 0.0012920519098279161 100-101 0.001248253540003241 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2283190.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.724653966440414 #Duplication Level Percentage of deduplicated Percentage of total 1 79.23526646872432 50.49239937658157 2 12.13387717655215 15.464542486941497 3 3.797973072702348 7.2607355949544665 4 1.63462053254562 4.166625112116327 5 0.8706213841987939 2.7740023221925756 6 0.5432140819877829 2.076967764262143 7 0.3636477219281707 1.6221327671889916 8 0.243112343492654 1.2393799971231823 9 0.20224917844570314 1.1599433020304362 >10 0.9269984098699786 9.962432626134671 >50 0.03406656802942032 1.4395829291860545 >100 0.012768431286502038 1.4770863275861146 >500 0.001309042369333477 0.5669369192135659 >1k 2.7558786722760114E-4 0.2972324744885474 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2300 0.10073625059675279 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.3798369824675126E-5 2 0.0 0.0 0.0 0.0 4.3798369824675126E-5 3 0.0 0.0 0.0 0.0 4.3798369824675126E-5 4 0.0 0.0 0.0 4.3798369824675126E-5 8.759673964935025E-5 5 0.0 0.0 0.0 4.3798369824675126E-5 8.759673964935025E-5 6 0.0 0.0 0.0 4.3798369824675126E-5 1.3139510947402538E-4 7 0.0 0.0 0.0 4.3798369824675126E-5 1.3139510947402538E-4 8 0.0 0.0 0.0 4.3798369824675126E-5 1.3139510947402538E-4 9 0.0 0.0 0.0 8.759673964935025E-5 1.3139510947402538E-4 10-11 0.0 0.0 0.0 1.3139510947402538E-4 1.3139510947402538E-4 12-13 0.0 0.0 0.0 1.3139510947402538E-4 2.6279021894805077E-4 14-15 0.0 0.0 0.0 1.3139510947402538E-4 2.8468940386038835E-4 16-17 0.0 0.0 0.0 1.3139510947402538E-4 3.50386958597401E-4 18-19 0.0 0.0 0.0 1.3139510947402538E-4 3.722861435097386E-4 20-21 0.0 0.0 0.0 1.3139510947402538E-4 5.255804378961015E-4 22-23 0.0 0.0 0.0 2.6279021894805077E-4 5.912779926331142E-4 24-25 0.0 0.0 0.0 5.474796228084391E-4 6.131771775454518E-4 26-27 0.0 0.0 0.0 9.197657663181777E-4 6.131771775454518E-4 28-29 0.0 0.0 0.0 0.00269359974421752 6.350763624577893E-4 30-31 0.0 0.0 0.0 0.009986028320025929 7.00773917194802E-4 32-33 0.0 0.0 0.0 0.027417779510246626 7.883706568441522E-4 34-35 0.0 0.0 0.0 0.055010752499791954 8.321690266688274E-4 36-37 0.0 0.0 0.0 0.0918232823374314 8.759673964935025E-4 38-39 0.0 0.0 0.0 0.1426074921491422 8.978665814058401E-4 40-41 0.0 0.0 0.0 0.19884459900402507 9.197657663181777E-4 42-43 0.0 0.0 0.0 0.26833071273087217 9.416649512305152E-4 44-45 0.0 0.0 0.0 0.36440243694129704 9.635641361428527E-4 46-47 0.0 0.0 0.0 0.4732851843254394 9.854633210551903E-4 48-49 0.0 0.0 0.0 0.5756419746057051 0.0010073625059675278 50-51 0.0 0.0 0.0 0.672808658061747 0.001051160875792203 52-53 0.0 0.0 0.0 0.7831367516501035 0.0011168584305292157 54-55 0.0 0.0 0.0 0.9286130370227621 0.0011387576154415532 56-57 0.0 0.0 0.0 1.1135516536074528 0.0011387576154415532 58-59 0.0 0.0 0.0 1.2914168334654583 0.0011606568003538907 60-61 0.0 0.0 0.0 1.4589236988599283 0.0011825559852662285 62-63 0.0 0.0 0.0 1.6322119490712557 0.0012701527249155786 64-65 0.0 0.0 0.0 1.8531528256518293 0.0012701527249155786 66-67 0.0 0.0 0.0 2.136791068636425 0.0012701527249155786 68-69 0.0 0.0 0.0 2.4317073918508756 0.0012701527249155786 70-71 0.0 0.0 0.0 2.7112723864417765 0.0012701527249155786 72-73 0.0 0.0 0.0 2.9943850489884767 0.0013577494645649287 74-75 0.0 0.0 0.0 3.318974767759144 0.0014453462042142793 76-77 0.0 4.3798369824675126E-5 0.0 3.727241272079853 0.0015329429438636294 78-79 0.0 4.3798369824675126E-5 0.0 4.18204354433928 0.0015767413136883045 80-81 0.0 6.569755473701269E-5 0.0 4.6263342078407845 0.0016205396835129796 82-83 0.0 8.759673964935025E-5 0.0 5.061186322645071 0.0018833299024610304 84-85 0.0 8.759673964935025E-5 0.0 5.5395740170550845 0.0018833299024610304 86-87 0.0 8.759673964935025E-5 0.0 6.100915823913034 0.0019709266421103805 88-89 0.0 8.759673964935025E-5 0.0 6.732882502113272 0.0020147250119350556 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2990 0.0 60.713505 1 GTATCAA 5215 0.0 38.819363 1 TCAACGC 6710 0.0 29.774426 4 TATCAAC 6785 0.0 29.725073 2 ATCAACG 6800 0.0 29.45014 3 CAACGCA 6900 0.0 29.004744 5 AACGCAG 7425 0.0 27.208805 6 TGGTATC 1415 0.0 26.159052 2 GTGGTAT 1535 0.0 24.767076 1 ACGCAGA 8690 0.0 22.864618 7 CGCAGAG 8875 0.0 22.173767 8 GTACATG 7445 0.0 21.70238 1 TACATGG 7650 0.0 20.594938 2 ACATGGG 7700 0.0 20.276312 3 GAGTACT 4700 0.0 19.936914 12-13 GCAGAGT 9590 0.0 19.677927 9 CAGAGTA 8925 0.0 19.120255 10-11 GTACTTT 4955 0.0 18.43214 14-15 AGAGTAC 8490 0.0 18.140314 10-11 CGTATAC 185 1.5332039E-4 17.95602 3 >>END_MODULE