##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921357_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1939637 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.43536960781837 31.0 31.0 34.0 26.0 34.0 2 30.491509493786722 31.0 31.0 34.0 26.0 34.0 3 30.522280199851828 33.0 31.0 34.0 26.0 34.0 4 33.99652048295635 37.0 35.0 37.0 30.0 37.0 5 33.993797292998636 37.0 35.0 37.0 30.0 37.0 6 34.038985129691795 37.0 35.0 37.0 30.0 37.0 7 33.96092413168031 37.0 35.0 37.0 30.0 37.0 8 33.930137958803634 37.0 35.0 37.0 30.0 37.0 9 35.48110084515814 39.0 37.0 39.0 30.0 39.0 10-11 35.38510762580833 39.0 36.0 39.0 30.0 39.0 12-13 35.26997319601554 39.0 35.0 39.0 29.0 39.0 14-15 36.38683294863936 40.0 37.0 41.0 28.5 41.0 16-17 36.32570862486125 40.0 37.0 41.0 28.0 41.0 18-19 36.2814562724881 40.0 37.0 41.0 27.5 41.0 20-21 36.22360214823702 40.0 36.5 41.0 27.0 41.0 22-23 36.10804083444479 40.0 36.0 41.0 27.0 41.0 24-25 36.00065733949187 40.0 36.0 41.0 27.0 41.0 26-27 35.83819369294358 40.0 36.0 41.0 27.0 41.0 28-29 35.69449180439433 40.0 36.0 41.0 26.5 41.0 30-31 35.52939776875776 40.0 35.5 41.0 25.5 41.0 32-33 35.33200207049051 39.0 35.0 41.0 25.0 41.0 34-35 35.15680511353413 39.0 35.0 41.0 25.0 41.0 36-37 34.9702552591026 39.0 35.0 41.0 24.0 41.0 38-39 35.188182118612914 39.0 35.0 41.0 24.5 41.0 40-41 35.2889739162534 40.0 35.0 41.0 24.5 41.0 42-43 35.09850064728606 40.0 35.0 41.0 23.5 41.0 44-45 34.94307955560757 40.0 35.0 41.0 23.0 41.0 46-47 34.75439270337697 39.5 35.0 41.0 21.5 41.0 48-49 34.5765011700643 39.0 35.0 41.0 20.0 41.0 50-51 32.85122190389232 37.0 32.5 39.5 16.0 40.0 52-53 32.99860850251877 37.5 32.5 39.5 14.5 40.0 54-55 33.84549377022608 38.0 34.0 40.0 15.0 41.0 56-57 33.84447424956319 38.0 34.0 41.0 14.0 41.0 58-59 33.65799992472819 38.0 34.0 40.5 13.0 41.0 60-61 33.40288337456957 37.5 33.5 40.0 10.5 41.0 62-63 33.109828024522116 37.0 33.0 40.0 8.0 41.0 64-65 32.813555062106985 36.5 33.0 40.0 7.0 41.0 66-67 32.467546762615896 36.0 33.0 39.0 2.0 41.0 68-69 32.09865015979794 35.5 32.5 39.0 2.0 41.0 70-71 31.721772682208062 35.0 32.0 38.5 2.0 40.5 72-73 31.36928172642613 35.0 32.0 37.0 2.0 40.0 74-75 30.980329309040815 35.0 32.0 37.0 2.0 39.0 76-77 30.614379649388006 35.0 31.0 36.5 2.0 39.0 78-79 30.279880462168954 35.0 31.0 36.0 2.0 38.0 80-81 29.94293184755704 35.0 31.0 35.5 2.0 37.0 82-83 29.65294614404654 35.0 31.0 35.0 2.0 37.0 84-85 29.429430609954338 35.0 31.0 35.0 2.0 36.0 86-87 29.209803690071904 35.0 30.0 35.0 2.0 36.0 88-89 29.00615450210529 35.0 30.0 35.0 2.0 36.0 90-91 28.760409293079064 34.0 30.0 35.0 2.0 35.0 92-93 28.570253093748985 34.0 30.0 35.0 2.0 35.0 94-95 28.369067253305644 34.0 30.0 35.0 2.0 35.0 96-97 28.112579828081234 34.0 29.0 35.0 2.0 35.0 98-99 27.875248564550994 34.0 29.0 35.0 2.0 35.0 100-101 26.826259501133457 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 64321.0 3 11321.0 4 8012.0 5 6133.0 6 5518.0 7 5781.0 8 6029.0 9 6714.0 10 7261.0 11 7797.0 12 7840.0 13 8012.0 14 8926.0 15 9834.0 16 10440.0 17 11414.0 18 10112.0 19 8668.0 20 8610.0 21 8930.0 22 9826.0 23 10991.0 24 12720.0 25 15086.0 26 17826.0 27 21212.0 28 24811.0 29 29727.0 30 35219.0 31 42958.0 32 54019.0 33 69561.0 34 97625.0 35 142549.0 36 233458.0 37 410886.0 38 416422.0 39 73063.0 40 5.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 44.006887206518705 18.27755875557793 13.675736988353338 24.039817049550024 2 16.92056271707893 19.506397396368268 37.931868747494875 25.641171139057935 3 19.618370774461905 23.355279446718605 29.279131041198998 27.747218737620493 4 14.542964437887527 16.205263646586676 34.80784904414572 34.44392287138008 5 15.43083154005022 36.218816990214144 33.1514259953495 15.19892547438614 6 33.94696798205968 33.6476361031888 17.005093024922665 15.40030288982885 7 29.155380790988417 31.614064560107373 20.3658299520824 18.864724696821806 8 27.176392693310454 33.292888436025216 19.793746493515066 19.73697237714927 9 26.966194216951468 15.684845822156355 19.626361477145334 37.72259848374684 10-11 26.02193293779823 25.007509425779674 26.975146572388674 21.99541106403342 12-13 26.49804976923924 22.810518843635766 26.863136268103805 23.82829511902119 14-15 24.20647364832315 24.485897048401757 24.369511464225035 26.938117839050058 16-17 23.97432383335452 27.132866736167177 25.438218077747916 23.45459135273039 18-19 23.867775541749765 26.340028955201944 26.939038083954614 22.853157419093673 20-21 24.391602318668085 25.403189728592274 27.085386981433174 23.11982097130647 22-23 24.4751356422912 25.12462997855823 26.675251284468928 23.724983094681644 24-25 24.258096760367458 25.484557447245272 26.55656939671379 23.700776395673476 26-27 23.833509363280427 25.77702437877244 26.642080921516776 23.74738533643036 28-29 23.831617388470463 25.90469982911025 26.656996321280985 23.60668646113831 30-31 24.33236739387127 25.454575923357343 26.525402317223456 23.68765436554793 32-33 24.058876470422938 25.517150347482442 26.330576624667657 24.093396557426964 34-35 24.402636712632198 25.777065323062782 26.257894914590942 23.562403049714085 36-37 24.277587476258137 25.68219829532917 26.40886424707622 23.631349981336474 38-39 24.10657409367138 25.725071918771427 26.441462541269996 23.7268914462872 40-41 24.279452950347707 25.488691296206166 26.502241736304168 23.729614017141962 42-43 24.145963655565414 25.61321093484797 26.15986033056271 24.080965079023905 44-45 24.093312960317043 25.68583300531951 26.261923431758145 23.958930602605307 46-47 24.22398751922677 25.65212169270487 25.979922795879173 24.143967992189186 48-49 23.953871363009892 25.882604850491063 26.087119357124998 24.076404429374048 50-51 24.034200299509617 25.87800794594156 26.2298465103617 23.85794524418712 52-53 24.30668542592285 25.68059344271526 26.088702834629686 23.924018296732203 54-55 23.80387332338213 25.629003716590653 26.302298376442153 24.264824583585064 56-57 23.871124400214406 25.82014504640064 26.04803451148553 24.260696041899426 58-59 23.926621723759727 25.724604924156907 26.25300869324425 24.095764658839116 60-61 23.996417562211533 25.667231621342424 26.47746497319759 23.858885843248455 62-63 23.96859494568126 25.668625736976214 26.3946493408803 23.968129976462222 64-65 23.804413978666837 25.574143744142575 26.303073293868806 24.31836898332178 66-67 23.828975964516317 25.638107557588402 26.151496851629048 24.381419626266233 68-69 23.791368350307845 25.616252138333902 26.318651075824423 24.273728435533833 70-71 23.74696779881757 25.520616643772627 26.317763062579363 24.41465249483044 72-73 23.683085004997558 25.732833319128385 26.211695063651085 24.37238661222297 74-75 23.72022845619543 25.862483089706302 26.196375838024828 24.220912616073445 76-77 23.824172259574272 25.567423903355795 26.09125941337551 24.517144423694422 78-79 23.67932738844552 25.66173452293089 26.186611680027983 24.472326408595606 80-81 23.8715492847128 25.804334790526635 26.05131962498608 24.272796299774484 82-83 23.82774202432108 25.731405841532972 26.25760211263876 24.183250021507188 84-85 23.74791008347266 25.80010994665934 26.195928253604784 24.25605171626322 86-87 23.680130261683466 26.006785410050686 26.00892991174213 24.304154416523723 88-89 23.563081929889247 25.82097700533198 26.117740740731172 24.498200324047602 90-91 23.705110573071135 25.65052899848001 26.18698143641516 24.457378992033696 92-93 23.73756556339302 25.562566209337778 26.28217450843604 24.417693718833167 94-95 23.760758500271457 25.50160251813573 26.309463914206425 24.428175067386384 96-97 23.67339270883454 25.374473427025553 26.360975690430134 24.591158173709776 98-99 23.49343127742889 25.43259001068411 26.210604782396935 24.86337392949007 100-101 23.721740667391582 25.447818429136674 26.299629548470854 24.53081135500089 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 92.0 1 73.0 2 75.0 3 103.0 4 103.0 5 118.5 6 173.0 7 360.5 8 575.0 9 699.0 10 641.0 11 511.0 12 496.0 13 537.5 14 637.0 15 752.0 16 841.0 17 951.0 18 1093.0 19 1169.5 20 1310.0 21 1497.0 22 1658.5 23 1907.0 24 2215.0 25 2602.0 26 3255.5 27 4297.5 28 5712.5 29 7799.5 30 10576.0 31 14139.5 32 18750.5 33 22054.0 34 24515.0 35 27874.0 36 32495.0 37 37651.5 38 41707.0 39 45741.5 40 49862.0 41 53358.5 42 56925.0 43 61050.0 44 65146.5 45 69896.5 46 73857.0 47 77242.5 48 80311.5 49 82362.5 50 83411.5 51 83156.0 52 82847.0 53 82568.5 54 81012.0 55 76986.5 56 72118.0 57 65911.5 58 59182.5 59 51641.0 60 43329.5 61 36836.5 62 30749.0 63 23917.0 64 17753.5 65 13451.5 66 10325.0 67 8102.0 68 6463.5 69 5135.0 70 4014.5 71 3073.0 72 2325.5 73 1805.0 74 1516.5 75 1201.5 76 871.0 77 585.5 78 392.5 79 288.0 80 214.5 81 161.0 82 107.5 83 74.5 84 56.5 85 45.0 86 41.5 87 33.5 88 32.5 89 37.5 90 26.0 91 23.5 92 24.5 93 14.0 94 8.5 95 10.5 96 10.0 97 6.0 98 5.0 99 5.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05000935742100197 2 0.057433426976284736 3 0.04892668061085657 4 0.054494732777318644 5 0.047483111530662696 6 0.01639482026791611 7 0.013713906261841777 8 0.0192304023897255 9 0.019745962775509027 10-11 0.021009085720678663 12-13 0.02616468957851392 14-15 0.04243061974998415 16-17 0.029000271700323307 18-19 0.02240109876229418 20-21 0.026113133539935565 22-23 0.04629732264336059 24-25 0.041554167094152154 26-27 0.029541610105396007 28-29 0.019333514466882206 30-31 0.012734341528853077 32-33 0.00961520119486275 34-35 0.009099640809079225 36-37 0.0012889009644588138 38-39 0.006315614725848188 40-41 0.003557366661906326 42-43 0.2170509224148642 44-45 0.19297425239877358 46-47 0.19898053089315165 48-49 0.19761429587082532 50-51 0.1962222828292098 52-53 0.2001147637418754 54-55 0.19887741881599494 56-57 0.20877617822303865 58-59 0.2060179301590968 60-61 0.21052908353470265 62-63 0.207513055277869 64-65 0.20926596058953298 66-67 0.19972809345253778 68-69 0.19810407823731965 70-71 0.18268882270239226 72-73 0.1903448944312776 74-75 0.19003555819980747 76-77 0.18707108598155223 78-79 0.21326155357935533 80-81 0.22145896371331333 82-83 0.21846871347576893 84-85 0.21411222821589812 86-87 0.2297079298858498 88-89 0.2282643608056559 90-91 0.2280581366513425 92-93 0.2313319451010679 94-95 0.24300938783906476 96-97 0.24334450208982403 98-99 0.23300751635486433 100-101 0.24236493735683534 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1939637.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.87108701196995 #Duplication Level Percentage of deduplicated Percentage of total 1 81.36980851872231 53.59917737084091 2 10.727289767410152 14.13236475343378 3 3.280297392500579 6.482302648996313 4 1.4762101420285298 3.8895826685405517 5 0.8466232212383242 2.7883995936271964 6 0.5460516294918493 2.1581408639571347 7 0.3595073441033365 1.6576797681411168 8 0.2698400383064365 1.4219725314077265 9 0.19765864064921418 1.171799056518488 >10 0.8909506876028015 9.782411534090777 >50 0.025083564341904535 1.0895292550172373 >100 0.009658800236337696 1.2503812273466506 >500 7.848102832754997E-4 0.32734101248907477 >1k 2.3544308498264893E-4 0.24891771559300216 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1950 0.10053427522778748 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5466811573505764E-4 2 0.0 0.0 0.0 0.0 1.5466811573505764E-4 3 0.0 0.0 0.0 0.0 1.5466811573505764E-4 4 0.0 0.0 0.0 0.0 1.5466811573505764E-4 5 0.0 0.0 0.0 0.0 1.5466811573505764E-4 6 0.0 0.0 0.0 0.0 2.062241543134102E-4 7 0.0 0.0 0.0 0.0 2.062241543134102E-4 8 0.0 0.0 0.0 0.0 2.062241543134102E-4 9 0.0 0.0 0.0 0.0 2.577801928917627E-4 10-11 0.0 0.0 0.0 2.5778019289176274E-5 2.577801928917627E-4 12-13 0.0 0.0 0.0 5.155603857835255E-5 3.608922700484678E-4 14-15 0.0 0.0 0.0 5.155603857835255E-5 4.124483086268204E-4 16-17 0.0 0.0 0.0 5.155603857835255E-5 4.6400434720517294E-4 18-19 0.0 0.0 0.0 7.733405786752882E-5 4.6400434720517294E-4 20-21 0.0 0.0 0.0 1.804461350242339E-4 5.155603857835254E-4 22-23 0.0 0.0 0.0 2.577801928917627E-4 5.155603857835254E-4 24-25 0.0 0.0 0.0 5.155603857835254E-4 5.67116424361878E-4 26-27 0.0 0.0 0.0 8.248966172536408E-4 5.928944436510543E-4 28-29 0.0 0.0 0.0 0.0031964743918578577 6.186724629402305E-4 30-31 0.0 5.155603857835255E-5 0.0 0.012734341528853079 6.186724629402305E-4 32-33 0.0 5.155603857835255E-5 0.0 0.03286697459369975 6.186724629402305E-4 34-35 0.0 5.155603857835255E-5 0.0 0.06588861730313456 6.186724629402305E-4 36-37 0.0 5.155603857835255E-5 0.0 0.11048459067340952 6.702285015185831E-4 38-39 0.0 7.733405786752882E-5 0.0 0.16920691861415305 6.960065208077594E-4 40-41 0.0 1.2889009644588136E-4 0.0 0.2334715207020695 8.248966172536408E-4 42-43 0.0 1.5466811573505764E-4 0.0 0.30755754813916214 8.248966172536408E-4 44-45 0.0 1.5466811573505764E-4 0.0 0.41046340114155383 8.248966172536408E-4 46-47 0.0 1.5466811573505764E-4 0.0 0.5339916695752864 8.50674636542817E-4 48-49 0.0 1.5466811573505764E-4 0.0 0.6510754331867251 9.280086944103459E-4 50-51 0.0 1.5466811573505764E-4 0.0 0.7582862154104093 9.280086944103459E-4 52-53 0.0 1.5466811573505764E-4 0.0 0.8739006319223649 9.537867136995221E-4 54-55 0.0 1.5466811573505764E-4 0.0 1.030656767219846 9.795647329886984E-4 56-57 0.0 1.5466811573505764E-4 0.0 1.2181660795293139 9.795647329886984E-4 58-59 0.0 1.5466811573505764E-4 0.0 1.4001588957108986 9.795647329886984E-4 60-61 5.155603857835255E-5 1.5466811573505764E-4 0.0 1.5702422669808835 9.795647329886984E-4 62-63 5.155603857835255E-5 1.5466811573505764E-4 0.0 1.7565400123837605 9.795647329886984E-4 64-65 5.155603857835255E-5 1.5466811573505764E-4 0.0 1.9869955048289962 0.0010053427522778748 66-67 5.155603857835255E-5 2.062241543134102E-4 0.0 2.2705537170099355 0.0010568987908562272 68-69 5.155603857835255E-5 2.062241543134102E-4 0.0 2.576281025779566 0.0011084548294345796 70-71 5.155603857835255E-5 2.062241543134102E-4 0.0 2.86406683312393 0.001134232848723756 72-73 5.155603857835255E-5 2.062241543134102E-4 0.0 3.151723750371848 0.0015466811573505764 74-75 5.155603857835255E-5 2.062241543134102E-4 0.0 3.4852655419545 0.0015466811573505764 76-77 5.155603857835255E-5 2.062241543134102E-4 0.0 3.897559182465585 0.0015466811573505764 78-79 5.155603857835255E-5 2.062241543134102E-4 0.0 4.358315499240321 0.0015724591766397527 80-81 5.155603857835255E-5 2.062241543134102E-4 0.0 4.804739237290276 0.001701349273085634 82-83 5.155603857835255E-5 2.062241543134102E-4 0.0 5.243738905784948 0.001804461350242339 84-85 5.155603857835255E-5 2.062241543134102E-4 0.0 5.719704253940299 0.001804461350242339 86-87 5.155603857835255E-5 2.577801928917627E-4 0.0 6.2803246174413045 0.001804461350242339 88-89 5.155603857835255E-5 2.577801928917627E-4 0.0 6.906782042206866 0.001804461350242339 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2540 0.0 58.65786 1 GTATCAA 4295 0.0 40.323666 1 TCAACGC 5370 0.0 31.370245 4 TATCAAC 5440 0.0 31.055418 2 ATCAACG 5560 0.0 30.299025 3 CAACGCA 5635 0.0 29.723494 5 AACGCAG 5905 0.0 28.516293 6 GTGGTAT 1150 0.0 28.46961 1 GTACATG 6570 0.0 25.927422 1 TGGTATC 1145 0.0 25.696413 2 TACATGG 6840 0.0 24.282772 2 ACGCAGA 6925 0.0 23.704489 7 CGCAGAG 7100 0.0 23.18824 8 ACATGGG 7105 0.0 22.775366 3 CATGGGG 6300 0.0 21.617487 4 GCAGAGT 7760 0.0 20.298923 9 CAGAGTA 7170 0.0 20.017696 10-11 GAGTACT 3720 0.0 19.45118 12-13 GTACTTT 3785 0.0 18.927887 14-15 ATGGGGG 3805 0.0 18.580212 5 >>END_MODULE