##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921356_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2971853 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.477124204999374 31.0 31.0 34.0 26.0 34.0 2 30.526192580857803 31.0 31.0 34.0 26.0 34.0 3 30.569499568114573 33.0 31.0 34.0 26.0 34.0 4 34.043082884651426 37.0 35.0 37.0 30.0 37.0 5 34.036083547874 37.0 35.0 37.0 30.0 37.0 6 34.08484504448908 37.0 35.0 37.0 30.0 37.0 7 34.005564541718584 37.0 35.0 37.0 30.0 37.0 8 33.97362621906265 37.0 35.0 37.0 30.0 37.0 9 35.53338640908551 39.0 37.0 39.0 30.0 39.0 10-11 35.4242871366787 39.0 37.0 39.0 30.0 39.0 12-13 35.30729649144827 39.0 35.0 39.0 29.0 39.0 14-15 36.429985265085456 40.0 37.0 41.0 29.0 41.0 16-17 36.371435262780494 40.0 37.0 41.0 29.0 41.0 18-19 36.32594546230921 40.0 37.0 41.0 28.0 41.0 20-21 36.26371728345917 40.0 37.0 41.0 27.5 41.0 22-23 36.15283444369557 40.0 36.0 41.0 27.0 41.0 24-25 36.04562338715946 40.0 36.0 41.0 27.0 41.0 26-27 35.89344745517359 40.0 36.0 41.0 27.0 41.0 28-29 35.74766248532481 40.0 36.0 41.0 27.0 41.0 30-31 35.596380608327536 40.0 35.5 41.0 26.0 41.0 32-33 35.412592581126994 39.0 35.0 41.0 25.0 41.0 34-35 35.254524197529285 39.0 35.0 41.0 25.0 41.0 36-37 35.08276671154327 39.0 35.0 41.0 24.5 41.0 38-39 35.324577460594455 39.0 35.0 41.0 25.0 41.0 40-41 35.4504596963578 40.0 35.0 41.0 25.0 41.0 42-43 35.286924857992645 40.0 35.0 41.0 24.0 41.0 44-45 35.16481350187913 40.0 35.0 41.0 24.0 41.0 46-47 35.00876220997472 40.0 35.0 41.0 23.0 41.0 48-49 34.86263200097717 39.0 35.0 41.0 23.0 41.0 50-51 33.14232736275987 37.0 32.5 39.5 18.5 40.0 52-53 33.298846544563276 37.5 33.5 39.5 19.5 40.0 54-55 34.16089120155001 39.0 34.0 40.5 20.5 41.0 56-57 34.177651956540245 39.0 34.0 41.0 20.0 41.0 58-59 33.99992933701633 38.0 34.0 41.0 19.5 41.0 60-61 33.74942754570969 38.0 34.0 40.0 18.0 41.0 62-63 33.45655320098269 37.0 34.0 40.0 17.0 41.0 64-65 33.168655381003035 37.0 33.0 40.0 14.0 41.0 66-67 32.83160455782974 36.0 33.0 39.0 12.5 41.0 68-69 32.46978400344835 36.0 33.0 39.0 9.0 41.0 70-71 32.089978373762094 35.0 32.5 39.0 7.0 40.5 72-73 31.731867626023224 35.0 32.0 37.5 4.0 40.0 74-75 31.334109560600744 35.0 32.0 37.0 2.0 39.0 76-77 30.965642311379465 35.0 32.0 36.5 2.0 39.0 78-79 30.626936628426776 35.0 31.5 36.0 2.0 38.0 80-81 30.28224932390667 35.0 31.0 36.0 2.0 37.0 82-83 29.98593285064907 35.0 31.0 35.0 2.0 37.0 84-85 29.756472645181304 35.0 31.0 35.0 2.0 36.0 86-87 29.53834644580334 35.0 31.0 35.0 2.0 36.0 88-89 29.343845742033672 35.0 31.0 35.0 2.0 36.0 90-91 29.095912381938135 34.5 30.0 35.0 2.0 35.5 92-93 28.90248306359702 34.0 30.0 35.0 2.0 35.0 94-95 28.695725697065097 34.0 30.0 35.0 2.0 35.0 96-97 28.440557456913247 34.0 30.0 35.0 2.0 35.0 98-99 28.210881224609697 34.0 30.0 35.0 2.0 35.0 100-101 27.15474116653818 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 96824.0 3 17237.0 4 11930.0 5 9105.0 6 8348.0 7 8444.0 8 9060.0 9 9403.0 10 10470.0 11 11056.0 12 11262.0 13 11320.0 14 12015.0 15 12850.0 16 13144.0 17 13637.0 18 13039.0 19 11968.0 20 12220.0 21 12727.0 22 14145.0 23 16014.0 24 19000.0 25 22642.0 26 26549.0 27 31737.0 28 37597.0 29 44544.0 30 53583.0 31 64937.0 32 81541.0 33 105702.0 34 153078.0 35 218204.0 36 352508.0 37 633273.0 38 668272.0 39 112459.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.90460842044098 18.074466892474902 13.45109880361585 24.569825883468273 2 16.29694846547896 19.67890456526533 39.164451567179384 24.85969540207633 3 19.533648911283006 23.94988861855702 28.946618040595567 27.569844429564412 4 14.002237551473614 15.83540697950415 35.96895978097179 34.193395688050444 5 14.882892927791266 37.23177410515061 33.31757811290164 14.567754854156483 6 33.5184118206123 34.046218691020115 17.57435672380788 14.861012764559703 7 29.307475551358554 31.860587130855716 20.4654118063574 18.366525511428325 8 27.286581312766366 33.80437171454179 19.961652335374122 18.947394637317725 9 27.740752981373024 15.66583043952072 19.185826185464723 37.407590393641534 10-11 26.202528599499974 25.093752645141382 27.085254873412683 21.618463881945964 12-13 26.775143622185425 22.526144984822842 27.010058475438107 23.688652917553622 14-15 24.217841100051707 24.051142116942433 24.557332062219924 27.173684720785936 16-17 24.147823754270853 26.944649481270854 25.40280059548753 23.504726168970763 18-19 24.153223770786987 26.54315918430538 26.57178388602623 22.731833158881397 20-21 24.777515436176103 25.522154215350856 26.572100279189055 23.128230069283987 22-23 24.781590792299042 25.143413756577775 26.168808860824903 23.906186590298276 24-25 24.46720934150729 25.403989119573104 26.06000594818214 24.068795590737466 26-27 24.014857000528444 25.808366908000362 26.20574286685583 23.971033224615365 28-29 24.037022932941497 26.208383655132018 25.940015686770764 23.81457772515573 30-31 24.8541986089218 25.58111908162455 25.8748083464692 23.68987396298445 32-33 24.42602232897694 25.5622752585762 25.79085509048211 24.220847321964747 34-35 24.621400520256696 25.901598796611935 25.923506112847917 23.553494570283448 36-37 24.56725555993933 25.80144978619986 25.996936218324308 23.634358435536505 38-39 24.495874048264987 25.895840666451747 25.879351665961114 23.72893361932215 40-41 24.615598164050933 25.572943306323527 25.906954128193394 23.90450440143215 42-43 24.311237577997638 25.67354604341279 25.638375555060612 24.376840823528955 44-45 24.151070547426016 25.681726738224718 25.921452228771138 24.245750485578125 46-47 24.269463402497095 25.545421306489324 25.704079515205784 24.48103577580779 48-49 24.10008220951948 25.7480484720947 25.90081961727819 24.25104970110763 50-51 24.275771207435405 25.66030109146541 26.001524151017374 24.06240355008181 52-53 24.45552221958876 25.490518017099227 25.97512760025879 24.078832163053224 54-55 23.786560869054384 25.386167634217433 26.330871850922733 24.496399645805454 56-57 24.00885487324014 25.528482888990904 25.881251571021817 24.58141066674714 58-59 24.14393367623807 25.56844206490667 26.12683249517732 24.160791763677935 60-61 24.43262626569154 25.530486180654606 26.220795948438347 23.816091605215508 62-63 24.29817050524913 25.38134212399821 26.286235741342306 24.03425162941036 64-65 23.92220178759614 25.226795970701588 26.33330034646329 24.517701895238982 66-67 24.015411355794406 25.476358123200832 25.99182873139681 24.516401789607954 68-69 23.931166639358796 25.474583790992988 26.18416696503042 24.410082604617795 70-71 23.872822237990178 25.29407898174194 26.174992879137477 24.658105901130405 72-73 23.841568945256007 25.751173297429297 25.935755687146756 24.47150207016794 74-75 23.821841802489256 25.65920124216609 26.07099238108016 24.447964574264493 76-77 23.767131172560934 25.211028336393355 26.154029743277018 24.867810747768697 78-79 23.712634372617575 25.347612912449456 26.262717370816667 24.677035344116298 80-81 23.973816127152027 25.594509776547852 25.866572786718685 24.565101309581436 82-83 23.9956338099173 25.576354457211387 26.119801471211822 24.308210261659486 84-85 23.971069430937952 25.63803844820633 25.888809610837683 24.502082510018035 86-87 23.5781190743544 25.922484693338117 25.923732530490646 24.575663701816833 88-89 23.578977791432436 25.520376823607933 26.11972789758017 24.780917487379465 90-91 23.836703832879518 25.290701791896637 26.2062438158421 24.66635055938174 92-93 24.060833757710455 25.221609170592856 26.144317449825135 24.573239621871554 94-95 23.955509406769043 25.334604467441636 26.034987443531303 24.674898682258014 96-97 23.67192637144119 25.22339396247302 26.24040251304189 24.8642771530439 98-99 23.41637068285628 25.126188340640816 26.201780270320356 25.255660706182546 100-101 23.717937366822916 25.261429724239644 26.211880892572104 24.80875201636534 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 51.0 1 49.0 2 61.0 3 78.0 4 94.5 5 118.0 6 168.5 7 347.5 8 532.0 9 600.0 10 564.5 11 497.0 12 521.5 13 579.5 14 669.0 15 805.0 16 893.5 17 978.5 18 1073.0 19 1199.0 20 1320.0 21 1432.0 22 1554.0 23 1683.5 24 1893.0 25 2112.5 26 2482.0 27 3171.0 28 4331.5 29 6363.0 30 9573.0 31 14175.0 32 20947.0 33 27986.0 34 34511.5 35 41715.5 36 50915.5 37 60330.5 38 67404.5 39 73761.0 40 79322.0 41 84458.0 42 89988.5 43 95953.5 44 103079.0 45 111012.0 46 117379.0 47 123002.0 48 129004.5 49 133462.5 50 134752.5 51 132983.0 52 131299.5 53 130384.0 54 127809.0 55 121908.0 56 112749.5 57 101439.0 58 90054.0 59 77506.5 60 64010.5 61 53399.0 62 44497.5 63 34951.0 64 25920.0 65 19201.0 66 14610.5 67 11345.0 68 8876.0 69 6968.0 70 5490.0 71 4236.5 72 3149.0 73 2490.5 74 2061.0 75 1558.0 76 1104.0 77 744.0 78 506.5 79 370.0 80 270.0 81 196.0 82 136.5 83 101.5 84 90.0 85 83.0 86 74.0 87 60.0 88 50.0 89 43.5 90 39.5 91 31.0 92 26.0 93 23.0 94 16.0 95 16.5 96 15.5 97 11.5 98 8.0 99 7.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05000247320442834 2 0.057472560049235275 3 0.048118126973305884 4 0.05525172341969808 5 0.04741149713663495 6 0.016858168960577794 7 0.014132596733418509 8 0.02072780854234715 9 0.01921360174948088 10-11 0.020307195544328742 12-13 0.02612847943690351 14-15 0.04135466996516988 16-17 0.028332491546519963 18-19 0.02163633261806691 20-21 0.02516948180142154 22-23 0.0450728888676526 24-25 0.04029472521016349 26-27 0.029039121383190893 28-29 0.018826637791303943 30-31 0.011608918745308063 32-33 0.00819354120139859 34-35 0.008176716681477852 36-37 0.0011945409143722789 38-39 0.005888581972257712 40-41 0.0031293607052569556 42-43 0.21193847744151545 44-45 0.1865334523612036 46-47 0.19275852473187605 48-49 0.19016754866408264 50-51 0.18882158707042374 52-53 0.19361657524783357 54-55 0.1913452650585342 56-57 0.20285323668431782 58-59 0.19911819326191438 60-61 0.20468710935567808 62-63 0.20120443373208569 64-65 0.2027859386046349 66-67 0.19275852473187605 68-69 0.19095830110035725 70-71 0.17558068989280426 72-73 0.18261333921967204 74-75 0.1824450940204647 76-77 0.18061122134910443 78-79 0.20613401806886142 80-81 0.21412566503121117 82-83 0.21328443903517436 84-85 0.20865769605697185 86-87 0.22620567033429986 88-89 0.22363151878642717 90-91 0.22258839855134155 92-93 0.22622249485422058 94-95 0.23710795924293698 96-97 0.23821837755770556 98-99 0.22684500209128783 100-101 0.23724255540230288 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2971853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.96609043642192 #Duplication Level Percentage of deduplicated Percentage of total 1 77.91568107545052 45.94383096710424 2 12.38443071789503 14.605229234300001 3 3.974881290753636 7.031496289938613 4 1.821139502579543 4.295419064257831 5 0.9960268457205351 2.9365904530930576 6 0.5990837196267702 2.1195374874300104 7 0.42522090765274406 1.7551530147276384 8 0.3157383912972708 1.4894286828388197 9 0.2250642783382882 1.1944044531453186 >10 1.253065976689372 13.123888835610655 >50 0.06702237469926248 2.6605526558068138 >100 0.021213668936679666 2.1436845621207374 >500 0.0011450002884101863 0.46825853951595237 >1k 2.8625007189922013E-4 0.23252576011012638 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.3649039841472646E-5 0.0 3 0.0 0.0 0.0 3.3649039841472646E-5 0.0 4 0.0 0.0 0.0 3.3649039841472646E-5 0.0 5 0.0 0.0 0.0 3.3649039841472646E-5 0.0 6 0.0 0.0 0.0 3.3649039841472646E-5 0.0 7 0.0 0.0 0.0 1.0094711952441793E-4 6.729807968294529E-5 8 0.0 0.0 0.0 1.0094711952441793E-4 1.0094711952441793E-4 9 0.0 0.0 0.0 1.0094711952441793E-4 1.0094711952441793E-4 10-11 0.0 0.0 0.0 1.6824519920736322E-4 1.0094711952441793E-4 12-13 0.0 0.0 0.0 1.6824519920736322E-4 3.028413585732538E-4 14-15 0.0 0.0 0.0 1.6824519920736322E-4 4.542620378598807E-4 16-17 0.0 0.0 0.0 1.6824519920736322E-4 5.552091573842986E-4 18-19 0.0 0.0 0.0 1.6824519920736322E-4 5.72033677305035E-4 20-21 0.0 0.0 0.0 1.6824519920736322E-4 5.72033677305035E-4 22-23 0.0 0.0 0.0 2.5236779881104485E-4 6.056827171465076E-4 24-25 0.0 0.0 0.0 4.879110777013533E-4 6.561562769087166E-4 26-27 0.0 0.0 0.0 9.085240757197614E-4 6.729807968294529E-4 28-29 0.0 0.0 0.0 0.00260780058771413 7.066298366709255E-4 30-31 0.0 0.0 0.0 0.009791870593868539 7.066298366709255E-4 32-33 1.6824519920736323E-5 0.0 0.0 0.02821471990707481 7.402788765123982E-4 34-35 3.3649039841472646E-5 0.0 0.0 0.05570598545755796 7.402788765123982E-4 36-37 3.3649039841472646E-5 0.0 0.0 0.09596706162787998 7.402788765123982E-4 38-39 3.3649039841472646E-5 0.0 0.0 0.16072463880279408 7.402788765123982E-4 40-41 3.3649039841472646E-5 0.0 0.0 0.23529091109149747 7.739279163538708E-4 42-43 3.3649039841472646E-5 0.0 0.0 0.31625050095008067 7.907524362746072E-4 44-45 3.3649039841472646E-5 0.0 0.0 0.42261511588897566 8.075769561953435E-4 46-47 3.3649039841472646E-5 0.0 0.0 0.545097620911936 8.075769561953435E-4 48-49 3.3649039841472646E-5 0.0 0.0 0.6630038565164562 9.085240757197614E-4 50-51 3.3649039841472646E-5 0.0 0.0 0.7862771139756912 9.085240757197614E-4 52-53 3.3649039841472646E-5 0.0 0.0 0.9189384535506971 0.0010767692749271247 54-55 3.3649039841472646E-5 0.0 0.0 1.0838355732938338 0.00114406735461007 56-57 3.3649039841472646E-5 0.0 0.0 1.2790336534142166 0.0011777163944515425 58-59 3.3649039841472646E-5 0.0 0.0 1.4786902313135946 0.0011777163944515425 60-61 3.3649039841472646E-5 0.0 0.0 1.683612883948163 0.0011777163944515425 62-63 3.3649039841472646E-5 0.0 0.0 1.9022138712782901 0.0012113654342930152 64-65 3.3649039841472646E-5 0.0 0.0 2.156247297561488 0.0012618389940552241 66-67 3.3649039841472646E-5 0.0 0.0 2.458668043136723 0.0012786635139759605 68-69 3.3649039841472646E-5 0.0 0.0 2.7830111381686775 0.0012786635139759605 70-71 3.3649039841472646E-5 0.0 0.0 3.1122165194577254 0.0012786635139759605 72-73 5.047355976220897E-5 0.0 0.0 3.451331542980087 0.0013627861135796422 74-75 6.729807968294529E-5 0.0 0.0 3.8297822940771296 0.0013796106335003783 76-77 6.729807968294529E-5 0.0 0.0 4.275379704177832 0.001413259673341851 78-79 6.729807968294529E-5 0.0 0.0 4.763459027078392 0.0014300841932625872 80-81 6.729807968294529E-5 0.0 0.0 5.254381693845557 0.0015142067928662689 82-83 6.729807968294529E-5 0.0 0.0 5.764417015242678 0.001615153912390687 84-85 6.729807968294529E-5 0.0 0.0 6.310406335710414 0.001615153912390687 86-87 6.729807968294529E-5 3.3649039841472646E-5 0.0 6.916307771615891 0.0016319784323114233 88-89 6.729807968294529E-5 3.3649039841472646E-5 0.0 7.5790256112936945 0.0016488029522321594 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3205 0.0 53.30428 1 GTATCAA 5810 0.0 43.94341 1 TCAACGC 7320 0.0 34.557343 4 CAACGCA 7525 0.0 33.2972 5 TATCAAC 7695 0.0 32.996056 2 ATCAACG 7720 0.0 32.704224 3 AACGCAG 8160 0.0 30.814068 6 GTACATG 12175 0.0 27.401476 1 ACGCAGA 9405 0.0 26.18322 7 TACATGG 12650 0.0 25.849108 2 GTGGTAT 1720 0.0 25.10733 1 CGCAGAG 9720 0.0 24.703012 8 ACATGGG 13045 0.0 24.374756 3 CATGGGG 11235 0.0 22.388601 4 TGGTATC 1775 0.0 21.389887 2 GCAGAGT 10600 0.0 20.817093 9 GAGTACA 9385 0.0 20.478983 1 AGTACAT 8980 0.0 20.135643 2 ATGGGGG 7615 0.0 20.12857 5 GTATATA 940 0.0 19.689032 1 >>END_MODULE