##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921356_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2971853 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.431958108291358 33.0 31.0 34.0 29.0 34.0 2 31.559987657532186 34.0 31.0 34.0 29.0 34.0 3 31.631775865091576 34.0 31.0 34.0 28.0 34.0 4 35.12469627535413 37.0 35.0 37.0 33.0 37.0 5 34.86481430945609 37.0 35.0 37.0 32.0 37.0 6 34.82059004937324 37.0 35.0 37.0 32.0 37.0 7 34.692537618785316 37.0 35.0 37.0 32.0 37.0 8 34.65194779149574 37.0 35.0 37.0 32.0 37.0 9 36.2728610735457 39.0 37.0 39.0 32.0 39.0 10-11 36.122621980293104 39.0 37.0 39.0 32.0 39.0 12-13 36.05195462225083 39.0 37.0 39.0 31.5 39.0 14-15 37.272733880175096 40.0 38.0 41.0 31.0 41.0 16-17 37.24699926274954 40.0 38.0 41.0 31.0 41.0 18-19 37.21549282551997 40.0 38.0 41.0 31.0 41.0 20-21 37.174643395888026 40.0 38.0 41.0 31.0 41.0 22-23 37.068724462481825 40.0 38.0 41.0 31.0 41.0 24-25 36.99141074609007 40.0 37.0 41.0 31.0 41.0 26-27 36.84894390806006 40.0 37.0 41.0 30.0 41.0 28-29 36.69752693016781 40.0 37.0 41.0 30.0 41.0 30-31 36.55540819145496 40.0 37.0 41.0 30.0 41.0 32-33 36.50352995252457 40.0 36.5 41.0 30.0 41.0 34-35 36.637441017439286 40.0 37.0 41.0 30.0 41.0 36-37 36.613208156661855 40.0 37.0 41.0 30.0 41.0 38-39 36.5287184460335 40.0 37.0 41.0 30.0 41.0 40-41 36.40626218726162 40.0 36.5 41.0 30.0 41.0 42-43 36.302479126659364 40.0 36.0 41.0 29.5 41.0 44-45 36.16484832863537 40.0 36.0 41.0 29.0 41.0 46-47 36.00659319286654 40.0 36.0 41.0 28.0 41.0 48-49 35.84987211682409 40.0 35.0 41.0 28.0 41.0 50-51 35.69310258616426 39.5 35.0 41.0 27.5 41.0 52-53 35.51765262279123 39.0 35.0 41.0 27.0 41.0 54-55 35.303681238607695 39.0 35.0 41.0 26.5 41.0 56-57 35.04367611722383 39.0 35.0 41.0 26.0 41.0 58-59 34.817915118951035 38.5 35.0 40.5 26.0 41.0 60-61 34.53688809641662 38.0 34.5 40.0 26.0 41.0 62-63 34.231915575905 37.0 34.0 40.0 25.0 41.0 64-65 33.919023753866696 37.0 34.0 40.0 25.0 41.0 66-67 33.58519768642662 36.0 34.0 39.0 23.5 41.0 68-69 33.22196454535268 36.0 34.0 39.0 23.0 41.0 70-71 32.84445394842881 35.0 33.0 38.5 22.5 40.0 72-73 32.45412693696492 35.0 33.0 37.5 21.5 39.5 74-75 32.04734049766257 35.0 33.0 37.0 20.5 39.0 76-77 29.29756956350129 33.0 29.0 34.5 13.5 36.5 78-79 30.965784983308396 34.5 31.5 36.0 18.0 37.0 80-81 31.168970504261146 35.0 32.0 35.5 18.5 37.0 82-83 31.01374344558765 35.0 32.0 35.0 18.0 37.0 84-85 30.79377210110998 35.0 32.0 35.0 16.5 36.0 86-87 30.5612160157316 35.0 32.0 35.0 12.0 36.0 88-89 30.29314437827174 35.0 32.0 35.0 7.0 36.0 90-91 30.116914766645593 34.5 32.0 35.0 3.5 35.0 92-93 29.981389725534875 34.0 31.0 35.0 2.0 35.0 94-95 29.88938500659353 34.0 31.0 35.0 2.0 35.0 96-97 29.708916288928155 34.0 31.0 35.0 2.0 35.0 98-99 29.452190939457637 34.0 31.0 35.0 2.0 35.0 100-101 28.3576998929624 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 53657.0 3 19169.0 4 10453.0 5 7374.0 6 6595.0 7 6481.0 8 6588.0 9 7043.0 10 7836.0 11 8511.0 12 9045.0 13 9879.0 14 10573.0 15 11443.0 16 12744.0 17 13510.0 18 12691.0 19 11233.0 20 10784.0 21 10624.0 22 11195.0 23 12722.0 24 14725.0 25 18073.0 26 21421.0 27 26124.0 28 31645.0 29 37749.0 30 46636.0 31 57709.0 32 74310.0 33 98521.0 34 146045.0 35 216008.0 36 367578.0 37 709896.0 38 744855.0 39 90406.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.952025981194836 19.53708612016606 13.98548280181453 25.52540509682457 2 15.399785991170454 20.907350328416065 37.72020027996123 25.972663400452245 3 18.20551467507675 24.91069839157834 28.850872118750697 28.03291481459421 4 13.625665857934605 16.93370528278141 35.00072348430039 34.439905374983596 5 14.69405655601749 37.526892650194945 33.30659775326885 14.47245304051871 6 33.63821924731696 34.611225032993225 17.242250713535334 14.508305006154472 7 29.1621478749425 32.012124438354704 20.460629056186903 18.365098630515885 8 27.311509986196924 34.22650634194338 19.68290619630783 18.77907747555187 9 27.5792577896686 15.594008182773509 19.073083359102892 37.753650668455 10-11 26.114640992610127 25.369826359246705 27.037874308299198 21.47765833984397 12-13 26.65475824542082 22.682783246039122 27.039569506702314 23.622889001837745 14-15 24.07891077302763 24.23676731605683 24.521033601974366 27.16328830894117 16-17 24.130458044344067 27.14425213637826 25.29210741315516 23.433182406122512 18-19 24.08858462622998 26.71878351766031 26.56719431262876 22.62543754348095 20-21 24.65069170168288 25.616844797200383 26.6159741237534 23.11648937736333 22-23 24.630478054637077 25.2735799106717 26.196676039627214 23.899265995064013 24-25 24.386477211049282 25.569492427686395 26.033838602899976 24.01019175836434 26-27 23.88969526905626 25.936108107398738 26.27844438974482 23.895752233800184 28-29 23.961147223312608 26.35805779189849 25.93333163956611 23.747463345222794 30-31 24.753554827740782 25.71774674468913 25.85508700796782 23.67361141960227 32-33 24.363581905712223 25.715201577688894 25.755417836836408 24.16579867976247 34-35 24.50008135598468 26.001978456396813 25.97897667127656 23.518963516341955 36-37 24.487346050711363 25.929096428171245 26.062565973459535 23.520991547657864 38-39 24.43956569769574 26.022672095838047 25.87342147829279 23.66434072817342 40-41 24.610663971039052 25.728431894461334 25.85766655472274 23.80323757977687 42-43 24.27871401436153 25.76293835735026 25.603362072432223 24.35498555585599 44-45 24.115563130915856 25.756198844234085 25.888719041533708 24.23951898331635 46-47 24.179738687460752 25.664218165616397 25.746833202428043 24.40920994449481 48-49 23.997839515001402 25.914765165039853 25.911719621544947 24.175675698413794 50-51 24.242988147695232 25.739185358686044 25.959766133902125 24.0580603597166 52-53 24.47373623424683 25.609133789114257 25.81168626322736 24.10544371341155 54-55 23.7246498875609 25.504899168223226 26.24385437799121 24.52659656622466 56-57 23.96471577173439 25.649561731751835 25.775449440319605 24.610273056194174 58-59 24.096876539587075 25.676324616970923 26.03118681803864 24.195612025403353 60-61 24.409365750044756 25.646849075727985 26.09276506274658 23.85102011148068 62-63 24.16539184022452 25.584020836534073 26.121778556631153 24.128808766610256 64-65 23.83207015455707 25.35700677121272 26.20480528555829 24.60611778867192 66-67 23.94671924143151 25.683685973945668 25.777887663853633 24.591707120769193 68-69 23.8071677222779 25.66718079856211 25.975121401602646 24.55053007755734 70-71 23.774206340389807 25.42905386981646 25.987643598646205 24.809096191147532 72-73 23.76212380301821 25.829361274814953 25.701965943879074 24.706548978287763 74-75 23.66546419719512 25.758387106762864 25.80242791578091 24.7737207802611 76-77 23.494435315006097 25.273124237714384 26.0114619423847 25.22097850489482 78-79 23.504786571974012 25.37479984046163 26.109575383142104 25.01083820442226 80-81 23.704735169726913 25.653734611523237 25.73310524866324 24.908424970086614 82-83 23.69184153373471 25.607747831978184 25.92069619019829 24.779714444088814 84-85 23.58584195130358 25.628539465891453 25.758299194967947 25.02731938783702 86-87 23.201118738876175 25.924517118691732 25.769031947370102 25.10533219506199 88-89 23.164349407386663 25.527633359086906 25.926285176400732 25.3817320571257 90-91 23.309434141238437 25.265534545188174 26.08975539377462 25.33527591979877 92-93 23.436118868988213 25.196088514932185 26.020455657609208 25.34733695847039 94-95 23.226587147822304 25.348684333395642 25.940886154133995 25.48384236464806 96-97 22.919352909117492 25.2198393058427 26.107189003163505 25.7536187818763 98-99 22.620255994944504 25.069717460684398 26.085829996569437 26.224196547801654 100-101 22.659475094656052 25.294601408164446 26.076279387794383 25.969644109385115 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 43.5 2 53.5 3 67.0 4 57.0 5 66.5 6 121.0 7 292.0 8 455.0 9 498.5 10 456.0 11 357.5 12 355.0 13 389.0 14 406.5 15 465.0 16 518.5 17 589.5 18 661.5 19 729.5 20 787.5 21 899.5 22 1039.5 23 1199.0 24 1451.0 25 1833.0 26 2349.5 27 3201.0 28 4543.5 29 6693.0 30 10240.5 31 15085.5 32 21983.5 33 28832.0 34 35086.5 35 42102.5 36 51165.5 37 60167.0 38 66914.0 39 73417.0 40 78746.5 41 83431.5 42 89161.5 43 96126.0 44 103053.0 45 110528.0 46 117367.0 47 123691.5 48 130279.5 49 134723.0 50 136393.0 51 135120.0 52 133114.5 53 131876.5 54 129075.5 55 122705.0 56 113577.5 57 101735.5 58 89766.0 59 77386.0 60 63959.5 61 53127.5 62 44092.5 63 34469.5 64 25084.5 65 18404.0 66 13964.5 67 10640.0 68 8306.0 69 6610.5 70 5141.0 71 3890.5 72 2834.0 73 2217.5 74 1775.0 75 1327.0 76 963.5 77 616.0 78 352.5 79 209.0 80 136.0 81 94.0 82 61.5 83 30.0 84 19.0 85 16.0 86 13.5 87 12.0 88 9.0 89 5.0 90 5.0 91 4.5 92 3.5 93 1.5 94 1.0 95 1.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15061310233043154 2 4.3743751793914437E-4 3 0.006124125251148021 4 0.0041388319005011345 5 0.026279900116190132 6 0.001043120235085652 7 1.3459615936589056E-4 8 0.001716101031915105 9 0.0 10-11 0.10072840076544837 12-13 2.1871875896957218E-4 14-15 0.005636214173446668 16-17 3.364903984147264E-5 18-19 1.8506971912809954E-4 20-21 5.21560117542826E-4 22-23 2.1871875896957218E-4 24-25 0.0013459615936589058 26-27 0.0022713101892994033 28-29 0.005838108412495504 30-31 0.013493264976430532 32-33 0.014065298653735564 34-35 0.011592094225387326 36-37 4.7108655778061706E-4 38-39 2.0189423904883586E-4 40-41 0.0042734280598670255 42-43 0.007857050802983863 44-45 0.007756103683459444 46-47 0.008042120522111961 48-49 0.010027413872758848 50-51 0.005131478575824578 52-53 0.0010262957151649156 54-55 7.402788765123982E-4 56-57 0.005282899255111205 58-59 0.009320784036087923 60-61 0.007301841645599563 62-63 0.017951762755425656 64-65 0.03502865047497302 66-67 0.03699711930569917 68-69 0.02777728238913567 70-71 0.04196035268231639 72-73 0.026464969835318236 74-75 0.02506853468189712 76-77 0.23840344727683369 78-79 0.06845897155747609 80-81 0.054208603184612424 82-83 0.020054827745517697 84-85 0.03289193644503951 86-87 0.0820363591335103 88-89 0.2645824002734994 90-91 0.31897607317723997 92-93 0.05298041323039868 94-95 0.004929584336775742 96-97 0.010347079751252838 98-99 0.0012281899542137514 100-101 0.0013796106335003783 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2971853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.019759733816 #Duplication Level Percentage of deduplicated Percentage of total 1 76.92905051435962 44.63405027393739 2 12.937875727937165 15.01304882401768 3 4.10303849641162 7.141719232211996 4 1.9355843399709762 4.492085533986114 5 1.0710308358799416 3.107047588263117 6 0.6420575573218855 2.2351215126657955 7 0.4528576875336552 1.8392285957019934 8 0.3208672509584521 1.4893312645647547 9 0.2354073627914881 1.2292450765860057 >10 1.2806532559721533 13.301845683741693 >50 0.06864801184132927 2.6843255143303377 >100 0.021592086360214664 2.197052544756169 >500 9.88123271674763E-4 0.37565081566946285 >1k 3.487493898107395E-4 0.260247539567504 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3649039841472646E-5 2 0.0 0.0 0.0 0.0 3.3649039841472646E-5 3 0.0 0.0 0.0 0.0 3.3649039841472646E-5 4 0.0 0.0 0.0 0.0 3.3649039841472646E-5 5 0.0 0.0 0.0 0.0 3.3649039841472646E-5 6 0.0 0.0 0.0 0.0 3.3649039841472646E-5 7 0.0 0.0 0.0 0.0 3.3649039841472646E-5 8 0.0 0.0 0.0 0.0 3.3649039841472646E-5 9 0.0 0.0 0.0 3.3649039841472646E-5 3.3649039841472646E-5 10-11 0.0 0.0 0.0 3.3649039841472646E-5 3.3649039841472646E-5 12-13 0.0 0.0 0.0 3.3649039841472646E-5 1.0094711952441793E-4 14-15 0.0 0.0 0.0 3.3649039841472646E-5 1.514206792866269E-4 16-17 0.0 0.0 0.0 3.3649039841472646E-5 1.6824519920736322E-4 18-19 0.0 0.0 0.0 3.3649039841472646E-5 2.0189423904883586E-4 20-21 0.0 0.0 0.0 3.3649039841472646E-5 2.6919231873178117E-4 22-23 0.0 0.0 0.0 1.1777163944515426E-4 3.3649039841472645E-4 24-25 0.0 0.0 0.0 4.3743751793914437E-4 4.037884780976717E-4 26-27 0.0 0.0 0.0 8.748750358782887E-4 4.71086557780617E-4 28-29 0.0 0.0 0.0 0.0025236779881104483 5.047355976220897E-4 30-31 0.0 0.0 0.0 0.010010589352838111 5.047355976220897E-4 32-33 0.0 0.0 0.0 0.02903912138319089 5.383846374635623E-4 34-35 0.0 0.0 0.0 0.056648158573119195 5.72033677305035E-4 36-37 0.0 0.0 0.0 0.09647179722550206 5.72033677305035E-4 38-39 0.0 0.0 0.0 0.1609265330418429 6.056827171465076E-4 40-41 0.0 0.0 0.0 0.23510584137236937 6.056827171465076E-4 42-43 0.0 0.0 0.0 0.31616637835047695 6.393317569879803E-4 44-45 0.0 0.0 0.0 0.42211038029135356 7.234543565916619E-4 46-47 0.0 0.0 0.0 0.5442900439557408 8.075769561953435E-4 48-49 0.0 0.0 0.0 0.6612036328849374 8.748750358782887E-4 50-51 0.0 0.0 0.0 0.7832150513501173 8.748750358782887E-4 52-53 0.0 0.0 0.0 0.9156240231263121 9.42173115561234E-4 54-55 0.0 0.0 0.0 1.0802687750706377 0.0010094711952441794 56-57 0.0 0.0 0.0 1.2752649609519717 0.0010262957151649156 58-59 0.0 0.0 0.0 1.4740971373752334 0.001043120235085652 60-61 0.0 0.0 0.0 1.6786160015317044 0.0010767692749271247 62-63 0.0 0.0 0.0 1.897250637901673 0.0011777163944515425 64-65 0.0 0.0 0.0 2.1515700810235234 0.0012450144741344878 66-67 0.0 0.0 0.0 2.453368319361691 0.0012618389940552241 68-69 0.0 0.0 0.0 2.7760794359613348 0.0012786635139759605 70-71 0.0 0.0 0.0 3.104914677812126 0.0013291370737381694 72-73 0.0 0.0 0.0 3.444820453770762 0.00146373323310406 74-75 0.0 0.0 0.0 3.827174493489416 0.0014805577530247963 76-77 0.0 0.0 0.0 4.276204105653948 0.0015142067928662689 78-79 0.0 0.0 0.0 4.768018471976911 0.0015142067928662689 80-81 0.0 0.0 0.0 5.261818131650523 0.0015310313127870053 82-83 0.0 0.0 0.0 5.7738555709182116 0.0016488029522321594 84-85 0.0 0.0 0.0 6.32310884825057 0.0016656274721528958 86-87 0.0 0.0 0.0 6.932913572777657 0.0016992765119943683 88-89 0.0 0.0 0.0 7.601267626628908 0.0017161010319151047 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3175 0.0 54.9344 1 GTATCAA 5920 0.0 44.79552 1 TCAACGC 7725 0.0 33.727867 4 ATCAACG 7950 0.0 32.952393 3 TATCAAC 7985 0.0 32.86739 2 CAACGCA 7950 0.0 32.830215 5 AACGCAG 8460 0.0 31.129965 6 GTACATG 12235 0.0 25.442476 1 ACGCAGA 10435 0.0 24.599892 7 TACATGG 12865 0.0 23.79386 2 CGCAGAG 10800 0.0 23.41638 8 ACATGGG 13120 0.0 22.318567 3 GTATAGG 670 0.0 21.989178 1 GTAAGTA 2235 0.0 20.384907 2 GCAGAGT 11775 0.0 20.185566 9 CATGGGG 10720 0.0 20.143347 4 AGAGTAC 10370 0.0 17.946712 10-11 TGTAAGT 2405 0.0 17.78482 1 CAGAGTA 10875 0.0 17.506735 10-11 TAAGTAC 3110 0.0 17.243803 3 >>END_MODULE