##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921355_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3643208 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.358380032103575 31.0 31.0 34.0 26.0 34.0 2 30.402566913555304 31.0 31.0 34.0 26.0 34.0 3 30.450552370328566 33.0 31.0 34.0 26.0 34.0 4 33.914593676781564 37.0 35.0 37.0 30.0 37.0 5 33.906393760663676 37.0 35.0 37.0 30.0 37.0 6 33.95753138442823 37.0 35.0 37.0 30.0 37.0 7 33.87528244338506 37.0 35.0 37.0 30.0 37.0 8 33.84175265315623 37.0 35.0 37.0 29.0 37.0 9 35.391619693413055 39.0 37.0 39.0 30.0 39.0 10-11 35.284608509862736 39.0 35.0 39.0 29.0 39.0 12-13 35.16277632240597 39.0 35.0 39.0 28.0 39.0 14-15 36.282466578905186 40.0 36.5 41.0 27.5 41.0 16-17 36.22291754958816 40.0 36.0 41.0 27.0 41.0 18-19 36.172467369417284 40.0 36.5 41.0 27.0 41.0 20-21 36.11213894457851 40.0 36.0 41.0 27.0 41.0 22-23 36.000706245704336 40.0 36.0 41.0 27.0 41.0 24-25 35.90201135921968 40.0 36.0 41.0 27.0 41.0 26-27 35.74715443093011 40.0 36.0 41.0 27.0 41.0 28-29 35.604710875689776 40.0 36.0 41.0 26.0 41.0 30-31 35.452992664706485 40.0 35.5 41.0 25.0 41.0 32-33 35.26728874662111 39.0 35.0 41.0 25.0 41.0 34-35 35.10739600923142 39.0 35.0 41.0 24.0 41.0 36-37 34.936687940957526 39.0 35.0 41.0 24.0 41.0 38-39 35.17133608621852 39.0 35.0 41.0 24.5 41.0 40-41 35.29183401002633 40.0 35.0 41.0 24.5 41.0 42-43 35.12694375396629 40.0 35.0 41.0 24.0 41.0 44-45 35.00798197632416 40.0 35.0 41.0 23.0 41.0 46-47 34.85165999306106 40.0 35.0 41.0 22.5 41.0 48-49 34.7034220939348 39.0 35.0 41.0 21.5 41.0 50-51 32.99637023194943 37.0 32.5 39.5 17.0 40.0 52-53 33.152536171418156 37.5 33.0 39.5 16.5 40.0 54-55 34.011612430583156 39.0 34.0 40.5 18.0 41.0 56-57 34.02530228853252 39.0 34.0 41.0 18.0 41.0 58-59 33.84883555921046 38.0 34.0 41.0 16.0 41.0 60-61 33.595720996440505 38.0 34.0 40.0 13.5 41.0 62-63 33.30259581665389 37.0 33.5 40.0 12.0 41.0 64-65 33.016023515539054 37.0 33.0 40.0 8.0 41.0 66-67 32.6814653459259 36.0 33.0 39.0 7.5 41.0 68-69 32.31889024727657 36.0 33.0 39.0 4.0 41.0 70-71 31.94173376870055 35.0 32.0 39.0 2.0 40.5 72-73 31.58898407667089 35.0 32.0 37.5 2.0 40.0 74-75 31.201005542368158 35.0 32.0 37.0 2.0 39.0 76-77 30.831183259369215 35.0 32.0 36.5 2.0 39.0 78-79 30.494490020882694 35.0 31.0 36.0 2.0 38.5 80-81 30.15129427142233 35.0 31.0 36.0 2.0 37.0 82-83 29.859809129755973 35.0 31.0 35.0 2.0 37.0 84-85 29.63135003546325 35.0 31.0 35.0 2.0 36.5 86-87 29.411185828533533 35.0 31.0 35.0 2.0 36.0 88-89 29.217746145704552 35.0 30.5 35.0 2.0 36.0 90-91 28.970362795646032 34.5 30.0 35.0 2.0 35.5 92-93 28.777489097520643 34.0 30.0 35.0 2.0 35.0 94-95 28.567261188491024 34.0 30.0 35.0 2.0 35.0 96-97 28.316740905268105 34.0 30.0 35.0 2.0 35.0 98-99 28.09194685013867 34.0 29.5 35.0 2.0 35.0 100-101 27.05717996337294 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 129940.0 3 22163.0 4 15152.0 5 11582.0 6 10367.0 7 10711.0 8 11229.0 9 11877.0 10 12890.0 11 13768.0 12 13946.0 13 13963.0 14 15042.0 15 16335.0 16 16725.0 17 17569.0 18 15945.0 19 14947.0 20 15118.0 21 15587.0 22 17038.0 23 19704.0 24 23287.0 25 27481.0 26 32740.0 27 38598.0 28 46159.0 29 54375.0 30 65139.0 31 79412.0 32 99299.0 33 128984.0 34 184568.0 35 263208.0 36 427729.0 37 774532.0 38 810713.0 39 145364.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.74075119689101 17.554099363717828 12.804049313035504 24.90110012635566 2 16.150499230706274 19.217731822174226 39.60401559790409 25.02775334921541 3 19.68450180043017 23.37076997774453 29.014827459690796 27.9299007621345 4 13.634652128310822 15.30416269468217 36.12947309994955 34.93171207705746 5 14.461628029917106 37.388610683542986 33.79990360836987 14.349857678170041 6 34.04146207143442 34.30355810394783 17.13597971535388 14.519000109263875 7 29.49234621044078 31.924016647266818 20.23735532470955 18.346281817582852 8 27.334031944868077 34.61278810519146 19.550617260902854 18.50256268903761 9 27.72564869727936 15.429570284209493 18.983300818623928 37.86148019988722 10-11 26.326335573978067 24.976128403109595 27.159041116800882 21.538494906111456 12-13 26.653320396154427 22.27323969802999 27.212307013093127 23.861132892722452 14-15 23.90653685399562 23.944198803467646 24.526812548253083 27.62245179428365 16-17 24.07799066157005 27.001096054697303 25.320552068913067 23.600361214819582 18-19 24.065787349562317 26.56141382593541 26.554289347710778 22.818509476791498 20-21 24.506439930520713 25.590485406425422 26.76144176799063 23.14163289506324 22-23 24.44589591842283 25.30548462189713 26.40766506412589 23.84095439555415 24-25 24.244150460623164 25.452474491974485 26.318526774742658 23.984848272659697 26-27 23.832878903966062 25.835768160437617 26.4105580454865 23.92079489010982 28-29 23.883669997041853 26.30294037102443 26.019411211996214 23.7939784199375 30-31 24.636189617606195 25.70750553906472 25.975310499200745 23.680994344128344 32-33 24.22326267285154 25.74110604123237 25.948936908467125 24.086694377448964 34-35 24.4603338981341 25.97456269116927 26.104103143737333 23.461000266959292 36-37 24.41683468717306 25.902442016970724 26.19558067296862 23.485142622887597 38-39 24.37139409417889 25.970770648880503 25.9847152689747 23.6731199879659 40-41 24.511374722144296 25.689622895804042 25.976989787207412 23.82201259484425 42-43 24.1523512816214 25.77198415548432 25.80924223071482 24.266422332179467 44-45 23.949034339189907 25.867018482717658 26.148576739990702 24.035370438101733 46-47 24.179033260545523 25.70526712392812 25.843050597611754 24.272649017914603 48-49 23.984076892931544 25.91467799709864 25.996452364746407 24.10479274522341 50-51 24.157804484220087 25.85347763630706 26.08988653115563 23.898831348317216 52-53 24.348447866891267 25.689229605692876 26.01608855581147 23.946233971604386 54-55 23.647607409339628 25.526329793414515 26.48458436423024 24.341478433015613 56-57 23.84388462960755 25.721883207906515 26.082548049107956 24.351684113377974 58-59 24.030174977409473 25.74733015092577 26.23577511811639 23.986719753548375 60-61 24.363695623473497 25.72011078839087 26.34420313772086 23.571990450414766 62-63 24.205056624012432 25.650354458754205 26.339579050146806 23.805009867086564 64-65 23.83107010168865 25.401740577874936 26.40644270153177 24.36074661890465 66-67 23.947328217927772 25.590622804591845 26.171073422492885 24.290975554987494 68-69 23.873288232090214 25.625163375011123 26.32538815702537 24.176160235873294 70-71 23.817185629779825 25.46948928046336 26.25220284697607 24.461122242780753 72-73 23.725966010360814 25.947008523740127 26.027319471891925 24.299705994007134 74-75 23.672384921648124 25.915358716726182 26.204454461370464 24.20780190025523 76-77 23.73965215255988 25.45020844530368 26.16274889040222 24.64739051173422 78-79 23.654908257896416 25.501426359800238 26.315722881732267 24.527942500571083 80-81 23.93010491442256 25.747790850036374 25.980461801706912 24.341642433834153 82-83 23.9270140414954 25.813471220394568 26.14907030485177 24.110444433258266 84-85 23.94698609202522 25.85443661204771 25.944448967601602 24.254128328325464 86-87 23.542637782971738 26.106150990153488 25.959685743462437 24.391525483412344 88-89 23.452595381785045 25.773559601795014 26.241130654562333 24.532714361857604 90-91 23.789877323397576 25.580398923161653 26.253766760951457 24.37595699248931 92-93 24.064178111012087 25.38676979152238 26.233137131454342 24.315914966011192 94-95 23.885301994948282 25.468541221323743 26.205292431324388 24.440864352403583 96-97 23.681092071667546 25.330081220285262 26.332031937841172 24.656794770206023 98-99 23.34968438899914 25.305456069553955 26.32338390784866 25.02147563359825 100-101 23.585105652699003 25.47034748368688 26.347176635718057 24.597370227896064 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 78.0 1 68.5 2 94.0 3 140.0 4 132.0 5 161.5 6 275.5 7 494.5 8 739.5 9 872.5 10 805.0 11 697.0 12 712.0 13 786.5 14 897.0 15 1007.0 16 1127.5 17 1244.0 18 1428.0 19 1619.0 20 1741.5 21 1913.0 22 2106.0 23 2385.0 24 2741.5 25 3294.5 26 4382.5 27 6218.5 28 8732.5 29 12367.5 30 17498.0 31 24064.0 32 32892.0 33 40187.0 34 46081.5 35 53680.5 36 63322.5 37 72945.5 38 80648.5 39 88289.5 40 95216.0 41 101320.0 42 108307.5 43 116572.5 44 123979.0 45 131630.0 46 138205.0 47 144434.0 48 152376.0 49 158707.5 50 161568.5 51 160906.0 52 159827.5 53 159483.0 54 156120.5 55 148338.0 56 138532.5 57 125824.0 58 111775.5 59 96067.5 60 79373.0 61 66484.5 62 55270.0 63 43076.5 64 31660.0 65 23485.0 66 17640.5 67 13322.5 68 10356.0 69 8131.5 70 6393.5 71 4838.0 72 3579.0 73 2857.0 74 2331.0 75 1764.0 76 1309.0 77 872.0 78 571.0 79 403.0 80 284.5 81 218.0 82 172.5 83 135.0 84 105.0 85 84.5 86 76.0 87 59.0 88 48.0 89 53.0 90 51.5 91 43.5 92 29.5 93 22.5 94 24.0 95 17.0 96 14.0 97 10.0 98 5.5 99 5.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05212439147037446 2 0.060551030849734636 3 0.05094411299052923 4 0.05711998875716127 5 0.049763834510683995 6 0.017841418881381462 7 0.015590655268653341 8 0.020449010871737217 9 0.0206960459024025 10-11 0.022068462739431843 12-13 0.027228750046662174 14-15 0.043958511290049865 16-17 0.028930546924578558 18-19 0.02294680951513062 20-21 0.02666605914348014 22-23 0.04663472412225709 24-25 0.04147443681502676 26-27 0.030042204562572325 28-29 0.019913768305295773 30-31 0.012214509849561156 32-33 0.00938733116528071 34-35 0.009071675292763958 36-37 0.0014135893421402237 38-39 0.006203324103372632 40-41 0.0035682837762762926 42-43 0.2128481272548809 44-45 0.18769172663213302 46-47 0.19400484408246796 48-49 0.1916717354595181 50-51 0.19003855942345316 52-53 0.19441656913357677 54-55 0.19250890973010598 56-57 0.20373527945700604 58-59 0.19986506397658327 60-61 0.20443521204389098 62-63 0.20265107015575282 64-65 0.2032274852273052 66-67 0.19399111991409768 68-69 0.19264615141380892 70-71 0.17668494359915765 72-73 0.18438420205489228 74-75 0.18380778698333997 76-77 0.18232557679934827 78-79 0.20735845990676346 80-81 0.21454992413279722 82-83 0.21324612813761937 84-85 0.20849756588149784 86-87 0.2255155346606617 88-89 0.22358042692045033 90-91 0.22293539100704654 92-93 0.22676443398235838 94-95 0.23612431681089854 96-97 0.2373732161325952 98-99 0.22712126235998603 100-101 0.2370026635865973 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3643208.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.574547259483346 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72612434274019 43.407457476653505 2 12.698978539790124 14.36877923093042 3 4.2689795420150745 7.245467545484982 4 2.031379307008018 4.596974584250465 5 1.1416282382120277 3.229355035774354 6 0.6689087798482639 2.2705926826685365 7 0.44225989589559805 1.7514457366923784 8 0.32553438958060693 1.473356856633209 9 0.2559656508689167 1.303302673069915 >10 1.3316552229935164 13.50853091387817 >50 0.07752651150267899 3.014258178345897 >100 0.02881541334886815 2.6859380766531302 >500 0.0016099453270981853 0.6327157888342932 >1k 6.342208690575287E-4 0.5118252201308013 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7448336740586867E-5 2 0.0 0.0 0.0 0.0 2.7448336740586867E-5 3 0.0 0.0 0.0 0.0 5.4896673481173734E-5 4 0.0 0.0 0.0 2.7448336740586867E-5 1.0979334696234747E-4 5 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 1.0979334696234747E-4 6 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 1.3724168370293432E-4 7 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 1.646900204435212E-4 8 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 2.1958669392469494E-4 9 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 2.1958669392469494E-4 10-11 0.0 2.7448336740586867E-5 0.0 2.7448336740586867E-5 2.1958669392469494E-4 12-13 0.0 2.7448336740586867E-5 0.0 5.4896673481173734E-5 2.7448336740586865E-4 14-15 0.0 2.7448336740586867E-5 0.0 5.4896673481173734E-5 3.7055254599792267E-4 16-17 0.0 2.7448336740586867E-5 0.0 5.4896673481173734E-5 4.6662172458997674E-4 18-19 0.0 2.7448336740586867E-5 0.0 5.4896673481173734E-5 5.215183980711505E-4 20-21 0.0 2.7448336740586867E-5 0.0 8.23450102217606E-5 5.215183980711505E-4 22-23 0.0 2.7448336740586867E-5 0.0 1.3724168370293432E-4 5.764150715523242E-4 24-25 0.0 2.7448336740586867E-5 0.0 2.7448336740586865E-4 7.136567552552585E-4 26-27 0.0 2.7448336740586867E-5 0.0 5.489667348117373E-4 7.411050919958454E-4 28-29 0.0 2.7448336740586867E-5 0.0 0.0019762802453222542 7.411050919958454E-4 30-31 0.0 2.7448336740586867E-5 0.0 0.007809051802696964 7.411050919958454E-4 32-33 1.3724168370293433E-5 2.7448336740586867E-5 0.0 0.021574392678101278 8.508984389581929E-4 34-35 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.04052746919747651 9.332434491799535E-4 36-37 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.07094022630604675 9.46967617550247E-4 38-39 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.12218627100072244 9.606917859205404E-4 40-41 4.11725051108803E-5 2.7448336740586867E-5 0.0 0.1843018570446705 9.881401226611273E-4 42-43 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.24695268565506004 9.881401226611273E-4 44-45 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.32626465466698584 0.0010155884594017141 46-47 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.41707747677321744 0.001043036796142301 48-49 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.5139563812991188 0.0010567609645125943 50-51 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.6231458648531734 0.0010979334696234746 52-53 5.4896673481173734E-5 2.7448336740586867E-5 0.0 0.7378250157553452 0.001207726816585822 54-55 5.4896673481173734E-5 4.11725051108803E-5 0.0 0.8737354551263612 0.0012763476584372892 56-57 5.4896673481173734E-5 5.4896673481173734E-5 0.0 1.028063728450311 0.001331244331918463 58-59 5.4896673481173734E-5 5.4896673481173734E-5 0.0 1.2000138339617172 0.0013724168370293434 60-61 5.4896673481173734E-5 5.4896673481173734E-5 0.0 1.3814610639853666 0.0013998651737699302 62-63 5.4896673481173734E-5 5.4896673481173734E-5 0.0 1.5780186033847095 0.0015096585207322777 64-65 5.4896673481173734E-5 5.4896673481173734E-5 0.0 1.791978388277584 0.0015233826891025712 66-67 6.862084185146716E-5 5.4896673481173734E-5 0.0 2.0405779741370793 0.0015508310258431578 68-69 8.23450102217606E-5 5.4896673481173734E-5 0.0 2.316200447517682 0.0015645551942134513 70-71 8.23450102217606E-5 5.4896673481173734E-5 0.0 2.608044887911972 0.0016606243728055055 72-73 8.23450102217606E-5 5.4896673481173734E-5 0.0 2.9184855764480098 0.001962556076951961 74-75 8.23450102217606E-5 5.4896673481173734E-5 0.0 3.245244301176326 0.0020311769188034283 76-77 8.23450102217606E-5 5.4896673481173734E-5 0.0 3.6100875931322065 0.0020449010871737214 78-79 8.23450102217606E-5 5.4896673481173734E-5 0.0 4.02462609875692 0.002058625255544015 80-81 8.23450102217606E-5 5.4896673481173734E-5 0.0 4.4581039567326375 0.0020723494239143084 82-83 8.23450102217606E-5 5.4896673481173734E-5 0.0 4.916326490279995 0.0021409702657657756 84-85 8.23450102217606E-5 5.4896673481173734E-5 0.0 5.389096642299863 0.0021409702657657756 86-87 8.23450102217606E-5 5.4896673481173734E-5 0.0 5.9039176462063105 0.0021958669392469496 88-89 8.23450102217606E-5 5.4896673481173734E-5 0.0 6.458758325080534 0.0022644877810984168 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3480 0.0 57.143066 1 GTATCAA 6305 0.0 42.15331 1 TCAACGC 7635 0.0 33.940037 4 CAACGCA 7970 0.0 32.452568 5 TATCAAC 8080 0.0 32.07258 2 ATCAACG 8075 0.0 31.973127 3 AACGCAG 8475 0.0 30.67796 6 GTACATG 12720 0.0 28.729784 1 TACATGG 13040 0.0 27.18915 2 ACGCAGA 10100 0.0 25.36879 7 ACATGGG 13865 0.0 24.988014 3 CGCAGAG 10425 0.0 24.397198 8 CATGGGG 11735 0.0 23.052633 4 ATGGGGG 8030 0.0 21.69009 5 GAGTACA 9980 0.0 20.40119 1 GCAGAGT 11865 0.0 20.076464 9 GTATATA 1240 0.0 19.137142 1 AGTACAT 9830 0.0 19.120281 2 CAGAGTA 10785 0.0 18.545332 10-11 AGAGTAC 10000 0.0 17.72343 10-11 >>END_MODULE