##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921355_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3643208 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.403992305682245 33.0 31.0 34.0 29.0 34.0 2 31.524460310803008 34.0 31.0 34.0 28.0 34.0 3 31.599154371641696 34.0 31.0 34.0 28.0 34.0 4 35.08827988959181 37.0 35.0 37.0 32.0 37.0 5 34.83303149312364 37.0 35.0 37.0 32.0 37.0 6 34.78868925408596 37.0 35.0 37.0 32.0 37.0 7 34.65901754717271 37.0 35.0 37.0 32.0 37.0 8 34.621730079644095 37.0 35.0 37.0 32.0 37.0 9 36.235995584111585 39.0 37.0 39.0 32.0 39.0 10-11 36.08521926280355 39.0 37.0 39.0 32.0 39.0 12-13 36.01149728481053 39.0 37.0 39.0 31.0 39.0 14-15 37.24222018067593 40.0 38.0 41.0 31.0 41.0 16-17 37.21779267063533 40.0 38.0 41.0 31.0 41.0 18-19 37.18322437258592 40.0 38.0 41.0 31.0 41.0 20-21 37.14731728191199 40.0 38.0 41.0 31.0 41.0 22-23 37.04127433844019 40.0 38.0 41.0 31.0 41.0 24-25 36.96497990232784 40.0 37.0 41.0 31.0 41.0 26-27 36.824117783008816 40.0 37.0 41.0 30.0 41.0 28-29 36.67375551986052 40.0 37.0 41.0 30.0 41.0 30-31 36.52892121449008 40.0 37.0 41.0 30.0 41.0 32-33 36.476043640659555 40.0 36.5 41.0 30.0 41.0 34-35 36.60396153609676 40.0 37.0 41.0 30.0 41.0 36-37 36.57707273370063 40.0 37.0 41.0 30.0 41.0 38-39 36.48791065456598 40.0 37.0 41.0 30.0 41.0 40-41 36.36386571944287 40.0 36.5 41.0 29.5 41.0 42-43 36.259443188530554 40.0 36.0 41.0 29.0 41.0 44-45 36.122628600947294 40.0 36.0 41.0 28.5 41.0 46-47 35.96241128697565 40.0 36.0 41.0 28.0 41.0 48-49 35.8012365750185 40.0 35.0 41.0 27.5 41.0 50-51 35.647558278308566 40.0 35.0 41.0 27.0 41.0 52-53 35.47337250576964 39.0 35.0 41.0 27.0 41.0 54-55 35.26461720000614 39.0 35.0 41.0 26.0 41.0 56-57 35.00620675514547 39.0 35.0 41.0 26.0 41.0 58-59 34.78148735949196 38.5 35.0 40.5 26.0 41.0 60-61 34.50102601882736 38.0 34.5 40.0 25.5 41.0 62-63 34.1973402287215 37.5 34.0 40.0 25.0 41.0 64-65 33.88701784251681 37.0 34.0 40.0 24.0 41.0 66-67 33.555377293857504 36.0 34.0 39.0 23.0 41.0 68-69 33.19409871739412 36.0 34.0 39.0 22.5 41.0 70-71 32.81580354456841 35.0 33.0 38.5 22.0 40.0 72-73 32.42234069534322 35.0 33.0 37.5 20.5 40.0 74-75 32.01567176510372 35.0 33.0 37.0 20.0 39.0 76-77 29.277696469704722 33.0 29.0 34.5 13.0 36.5 78-79 30.93535148144163 34.5 31.5 36.0 16.5 37.0 80-81 31.13576715905323 35.0 32.0 35.5 18.0 37.0 82-83 30.97510820134343 35.0 32.0 35.0 17.5 37.0 84-85 30.75040019674968 35.0 32.0 35.0 13.5 36.0 86-87 30.511776297153496 35.0 32.0 35.0 8.5 36.0 88-89 30.242043825112376 35.0 32.0 35.0 2.0 36.0 90-91 30.061785245311274 34.5 31.5 35.0 2.0 35.0 92-93 29.915149093875506 34.0 31.0 35.0 2.0 35.0 94-95 29.818297225961295 34.0 31.0 35.0 2.0 35.0 96-97 29.63214644895378 34.0 31.0 35.0 2.0 35.0 98-99 29.37290404500649 34.0 31.0 35.0 2.0 35.0 100-101 28.296636508264143 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69286.0 3 23871.0 4 12770.0 5 9125.0 6 7940.0 7 7872.0 8 8113.0 9 8760.0 10 9702.0 11 10536.0 12 11381.0 13 12222.0 14 13326.0 15 14625.0 16 15941.0 17 17511.0 18 15948.0 19 13852.0 20 13076.0 21 12923.0 22 13690.0 23 15675.0 24 18264.0 25 21857.0 26 26570.0 27 32228.0 28 38258.0 29 46195.0 30 56628.0 31 70070.0 32 89521.0 33 119808.0 34 177008.0 35 259262.0 36 443879.0 37 871900.0 38 916387.0 39 117224.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.35356761254509 19.149069519851405 13.510358994714739 25.987003872888764 2 15.08477874741058 20.556139140736317 38.33852704320309 26.02055506865002 3 18.207978162866606 24.459582280277434 28.956930459743134 28.375509097112822 4 13.222627803345432 16.431607731746244 35.209019455633154 35.13674500927518 5 14.216140511567671 37.70055656273706 33.86161628059262 14.221686645102642 6 33.91796444397598 34.93263525650316 16.92218716100783 14.227213138513022 7 29.212148660518228 32.13106609574001 20.265700483091788 18.391084760649978 8 27.10975623815241 35.35169877902231 19.244630876720283 18.293914106104996 9 27.320153008008326 15.57199039966974 18.941932494658552 38.16592409766338 10-11 26.202071818498545 25.369074611183713 27.110738594337473 21.318114975980272 12-13 26.492349988210904 22.478636208802325 27.34150802166339 23.68750578132338 14-15 23.705246485735696 24.12555826088866 24.612463320166565 27.55673193320908 16-17 23.962951810783977 27.249429828329536 25.312836156994905 23.47478220389158 18-19 23.951945992422853 26.72923541646509 26.623353007012398 22.69546558409966 20-21 24.32666598411222 25.72289240956451 26.85790451575644 23.092537090566832 22-23 24.257033855667036 25.430315263967046 26.44845837492908 23.86419250543684 24-25 24.063084617837067 25.66018283411405 26.354707623660207 23.922024924388683 26-27 23.649904538808737 25.9908481875412 26.48486379813255 23.874383475517508 28-29 23.750101050388768 26.460804321292063 26.094401444749494 23.694693183569683 30-31 24.47869626161297 25.845143731534957 26.0226085419198 23.653551464932274 32-33 24.086623800956104 25.9187293799589 25.988938406574913 24.00570841251008 34-35 24.35070407533562 26.0978392397919 26.16189724804491 23.389559436827575 36-37 24.252806850709867 26.00845496570377 26.275927008363148 23.462811175223212 38-39 24.29990118577075 26.111111111111114 26.023386034255598 23.565601668862538 40-41 24.462899571659207 25.888355249044714 25.948031168178076 23.700714011118002 42-43 24.075843122270022 25.865700510144695 25.862996611479684 24.195459756105596 44-45 23.891695493323923 25.94169939818477 26.132852287418075 24.033752821073236 46-47 24.069985180703593 25.843716471461974 25.82749306833827 24.25880527949616 48-49 23.814074835693937 26.063403343645398 26.03007751823072 24.092444302429943 50-51 24.05612443769057 25.91792176363954 26.099557179608524 23.92639661906137 52-53 24.284348512783858 25.814316131456604 25.934088888486308 23.967246467273227 54-55 23.563519851909433 25.69197864720233 26.388074581079806 24.35642691980843 56-57 23.783240421901215 25.828513454143586 25.989782281592937 24.39846384236226 58-59 23.93616145178797 25.853206531376845 26.168619260874603 24.042012755960588 60-61 24.26703442990225 25.85291730666318 26.19905413879814 23.680994124636435 62-63 24.10220220923733 25.803687223474714 26.20095296558101 23.89315760170695 64-65 23.6778189571319 25.597612802561283 26.291064278462432 24.43350396184438 66-67 23.798806364408957 25.83518108415721 26.031223442157277 24.334789109276556 68-69 23.724047590839696 25.771795754263632 26.16982753283309 24.334329122063583 70-71 23.662607632105352 25.631218112660832 26.078174619356524 24.62799963587729 72-73 23.624545844170427 26.072381587267245 25.85749754886954 24.445575019692782 74-75 23.540390730038695 26.012359362692216 25.94944511085016 24.497804796418926 76-77 23.5165058606505 25.53546250376432 26.047713114344763 24.900318521240415 78-79 23.46291377385986 25.56785946922738 26.179196017042273 24.790030739870488 80-81 23.713604968288383 25.88518509211385 25.815866780311346 24.58534315928642 82-83 23.674687904477075 25.893313936050188 25.97607451829264 24.455923641180092 84-85 23.62799604170488 25.90858743559808 25.780332742810764 24.68308377988628 86-87 23.278473977908096 26.216218146634883 25.726912328232 24.778395547225024 88-89 23.1670439663404 25.92498050431052 25.936732273371465 24.971243255977612 90-91 23.39088578454455 25.665914904983385 26.053099708933296 24.890099601538772 92-93 23.54681575169461 25.533127043814442 26.018074477061564 24.901982727429388 94-95 23.368220554102777 25.634030185632845 25.95727808034231 25.04047117992207 96-97 23.04846893432141 25.467846021721797 26.105219871811503 25.378465172145294 98-99 22.73620289827624 25.426816322234057 26.079737524962837 25.75724325452687 100-101 22.770827740639547 25.683983019071977 26.050177511414585 25.49501172887389 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 89.0 1 74.5 2 73.0 3 111.0 4 112.5 5 112.5 6 196.5 7 431.0 8 659.5 9 705.0 10 595.5 11 477.0 12 486.0 13 536.0 14 608.0 15 663.0 16 723.0 17 841.0 18 955.5 19 1074.5 20 1214.5 21 1416.5 22 1645.5 23 1956.0 24 2410.5 25 3114.5 26 4371.0 27 6383.0 28 9232.0 29 13342.0 30 18514.5 31 24974.5 32 33867.5 33 41204.0 34 47178.5 35 54714.0 36 64220.5 37 73418.0 38 81132.0 39 89477.5 40 96306.0 41 102230.0 42 108802.5 43 116391.5 44 124255.0 45 132158.5 46 139078.5 47 145055.5 48 153074.0 49 160213.0 50 162697.0 51 161693.0 52 160395.0 53 160148.0 54 157192.5 55 148921.5 56 137929.5 57 124923.5 58 110967.5 59 95343.0 60 78729.0 61 65366.5 62 54332.5 63 42097.0 64 30315.5 65 22401.5 66 16763.5 67 12549.5 68 9639.5 69 7596.0 70 5919.0 71 4304.5 72 3201.0 73 2602.5 74 2032.0 75 1516.5 76 1077.0 77 654.0 78 388.5 79 238.5 80 153.5 81 95.5 82 54.5 83 37.5 84 30.5 85 20.0 86 14.0 87 8.0 88 4.0 89 2.5 90 3.5 91 3.5 92 3.0 93 2.0 94 2.0 95 2.0 96 2.0 97 2.0 98 1.0 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14698584324584268 2 5.215183980711505E-4 3 0.006560152481000261 4 0.00411725051108803 5 0.028299235179545062 6 0.0015371068574728645 7 2.1958669392469496E-4 8 0.0017017968779163859 9 0.0 10-11 0.10155884594017142 12-13 3.019317041464556E-4 14-15 0.0054347706746361996 16-17 1.9213835718410807E-4 18-19 4.2544921947909646E-4 20-21 8.508984389581929E-4 22-23 1.9213835718410807E-4 24-25 0.0019076594034707873 26-27 0.0028683511893913276 28-29 0.006134703261521164 30-31 0.01410844508466165 32-33 0.01410844508466165 34-35 0.011418508084084136 36-37 6.450359134037914E-4 38-39 2.1958669392469496E-4 40-41 0.0054210465062659065 42-43 0.008783467756987797 44-45 0.008577605231433397 46-47 0.008852088598839266 48-49 0.010636230486977412 50-51 0.005379874001155026 52-53 0.0016194518676946252 54-55 8.783467756987798E-4 56-57 0.006107254924780578 58-59 0.009936297900092447 60-61 0.007809051802696964 62-63 0.01877466233056142 64-65 0.035147595196321484 66-67 0.03823553307963751 68-69 0.028450201031618286 70-71 0.04332719954501637 72-73 0.02775026844473332 74-75 0.026048471566816937 76-77 0.24035136066894888 78-79 0.06852477267287511 80-81 0.05584364109872399 82-83 0.021231288468843944 84-85 0.03392614421136537 86-87 0.08374487539553052 88-89 0.2665919705929499 90-91 0.32218857666100864 92-93 0.05175383892437654 94-95 0.005036769791897691 96-97 0.010142160425646847 98-99 0.0011665543114749417 100-101 0.0017017968779163859 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3643208.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.44690241722946 #Duplication Level Percentage of deduplicated Percentage of total 1 75.70597393674164 41.97661749271831 2 13.18754181180448 14.624166879245129 3 4.551074450272983 7.57028942813497 4 2.0868278822400383 4.628325677924681 5 1.1342779098569138 3.1446098290927655 6 0.7215502370559999 2.400463534990369 7 0.4878750524316665 1.8935812296785524 8 0.33535568985918685 1.4875547368548003 9 0.26822347611148706 1.3384944815367332 >10 1.4053154201032707 13.919955228419715 >50 0.08464486570179969 3.184048476039817 >100 0.029253226959229935 2.759462744182372 >500 0.0014403615540773745 0.5646080154267781 >1k 6.456793072583634E-4 0.5078222457549728 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7448336740586867E-5 2 0.0 0.0 0.0 0.0 2.7448336740586867E-5 3 0.0 0.0 0.0 0.0 2.7448336740586867E-5 4 0.0 0.0 0.0 2.7448336740586867E-5 2.7448336740586867E-5 5 0.0 0.0 0.0 2.7448336740586867E-5 2.7448336740586867E-5 6 0.0 0.0 0.0 2.7448336740586867E-5 8.23450102217606E-5 7 0.0 0.0 0.0 2.7448336740586867E-5 8.23450102217606E-5 8 0.0 0.0 0.0 2.7448336740586867E-5 8.23450102217606E-5 9 0.0 0.0 0.0 2.7448336740586867E-5 1.3724168370293432E-4 10-11 2.7448336740586867E-5 0.0 0.0 5.4896673481173734E-5 1.3724168370293432E-4 12-13 2.7448336740586867E-5 1.3724168370293433E-5 0.0 8.23450102217606E-5 2.744833674058687E-4 14-15 2.7448336740586867E-5 2.7448336740586867E-5 0.0 8.23450102217606E-5 3.7055254599792267E-4 16-17 2.7448336740586867E-5 2.7448336740586867E-5 0.0 8.23450102217606E-5 4.940700613305637E-4 18-19 2.7448336740586867E-5 2.7448336740586867E-5 0.0 8.23450102217606E-5 5.215183980711505E-4 20-21 2.7448336740586867E-5 2.7448336740586867E-5 0.0 1.0979334696234747E-4 5.215183980711505E-4 22-23 2.7448336740586867E-5 2.7448336740586867E-5 0.0 1.646900204435212E-4 5.489667348117374E-4 24-25 2.7448336740586867E-5 2.7448336740586867E-5 0.0 3.019317041464555E-4 6.03863408292911E-4 26-27 2.7448336740586867E-5 2.7448336740586867E-5 0.0 5.352425664414439E-4 6.03863408292911E-4 28-29 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.001962556076951961 6.03863408292911E-4 30-31 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.00783650013943755 6.03863408292911E-4 32-33 2.7448336740586867E-5 2.7448336740586867E-5 0.0 0.021766531035285384 6.587600817740848E-4 34-35 4.11725051108803E-5 2.7448336740586867E-5 0.0 0.041035263427177365 7.136567552552585E-4 36-37 5.4896673481173734E-5 4.11725051108803E-5 0.0 0.07192836642870788 7.136567552552585E-4 38-39 5.4896673481173734E-5 5.4896673481173734E-5 0.0 0.12336654948056769 7.411050919958454E-4 40-41 5.4896673481173734E-5 5.4896673481173734E-5 0.0 0.18553703219799694 7.411050919958454E-4 42-43 5.4896673481173734E-5 5.4896673481173734E-5 0.0 0.24842117167068145 7.548292603661389E-4 44-45 5.4896673481173734E-5 5.4896673481173734E-5 0.0 0.32719789811616573 7.960017654770192E-4 46-47 6.862084185146716E-5 5.4896673481173734E-5 0.0 0.41812051356935975 8.508984389581928E-4 48-49 8.23450102217606E-5 5.4896673481173734E-5 0.0 0.5140387263093406 9.057951124393667E-4 50-51 8.23450102217606E-5 5.4896673481173734E-5 0.0 0.6225282772765102 9.606917859205404E-4 52-53 8.23450102217606E-5 5.4896673481173734E-5 0.0 0.7367682547908327 0.0010018642910314206 54-55 8.23450102217606E-5 5.4896673481173734E-5 0.0 0.8721160032586666 0.0010842093012531813 56-57 8.23450102217606E-5 5.4896673481173734E-5 0.0 1.025305170607882 0.0011528301431046484 58-59 8.23450102217606E-5 5.4896673481173734E-5 0.0 1.196925896078401 0.0011802784798452353 60-61 8.23450102217606E-5 5.4896673481173734E-5 0.0 1.378016297724423 0.0011802784798452353 62-63 8.23450102217606E-5 8.23450102217606E-5 0.0 1.574916941333023 0.001262623490066996 64-65 8.23450102217606E-5 1.235175153326409E-4 0.0 1.7877101719144226 0.0013037959951778763 66-67 8.23450102217606E-5 1.646900204435212E-4 0.0 2.035843136049328 0.0013449685002887564 68-69 8.23450102217606E-5 1.646900204435212E-4 0.0 2.3107107801695648 0.0013724168370293434 70-71 8.23450102217606E-5 1.7841418881381463E-4 0.0 2.602102323007635 0.0014410376788808106 72-73 8.23450102217606E-5 1.9213835718410807E-4 0.0 2.913407634151001 0.001619451867694625 74-75 8.23450102217606E-5 1.9213835718410807E-4 0.0 3.24168974156842 0.0016743485411757988 76-77 8.23450102217606E-5 1.9213835718410807E-4 0.0 3.6093876605453215 0.0017017968779163859 78-79 8.23450102217606E-5 1.9213835718410807E-4 0.0 4.025778928900024 0.0017017968779163859 80-81 8.23450102217606E-5 1.9213835718410807E-4 0.0 4.463977900795124 0.001770417719767853 82-83 8.23450102217606E-5 1.9213835718410807E-4 0.0 4.925370717236019 0.0020449010871737214 84-85 8.23450102217606E-5 1.9213835718410807E-4 0.0 5.401050392950388 0.002058625255544015 86-87 8.23450102217606E-5 1.9213835718410807E-4 0.0 5.920235682398589 0.0020723494239143084 88-89 8.23450102217606E-5 1.9213835718410807E-4 0.0 6.481156167860853 0.0020997977606548954 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3450 0.0 51.105637 1 GTATCAA 6420 0.0 44.859203 1 TCAACGC 8265 0.0 33.993057 4 CAACGCA 8550 0.0 32.974762 5 ATCAACG 8705 0.0 32.438408 3 TATCAAC 8750 0.0 32.163548 2 AACGCAG 9050 0.0 31.04447 6 GTACATG 12460 0.0 26.012392 1 ACGCAGA 11000 0.0 25.281136 7 TACATGG 12940 0.0 24.939741 2 CGCAGAG 11330 0.0 24.209137 8 ACATGGG 13675 0.0 23.043692 3 CATGGGG 11510 0.0 21.06963 4 GCAGAGT 12570 0.0 20.913332 9 GAGTACA 9960 0.0 19.419992 1 ATGGGGG 7625 0.0 19.391602 5 AGAGTAC 10960 0.0 18.997522 10-11 GTATATG 1265 0.0 18.784231 1 TACCGTA 255 2.656834E-7 18.64203 7 CGTATAC 260 3.3154356E-7 18.253157 3 >>END_MODULE