##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921354_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1540742 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.171025389065786 33.0 31.0 34.0 28.0 34.0 2 31.245205881322118 34.0 31.0 34.0 28.0 34.0 3 31.28823579807651 34.0 31.0 34.0 28.0 34.0 4 34.71183559609591 37.0 35.0 37.0 32.0 37.0 5 34.7108892987924 37.0 35.0 37.0 32.0 37.0 6 34.76132214218863 37.0 35.0 37.0 32.0 37.0 7 34.69833430905369 37.0 35.0 37.0 32.0 37.0 8 34.67419983358668 37.0 35.0 37.0 32.0 37.0 9 36.34013157296939 39.0 37.0 39.0 32.0 39.0 10-11 36.253101752272606 39.0 37.0 39.0 32.0 39.0 12-13 36.16202355748075 39.0 37.0 39.0 32.0 39.0 14-15 37.42210701077792 40.0 38.0 41.0 32.0 41.0 16-17 37.36746807706936 40.0 38.0 41.0 32.0 41.0 18-19 37.32869390202902 40.0 38.0 41.0 32.0 41.0 20-21 37.2759313369792 40.0 38.0 41.0 32.0 41.0 22-23 37.17321329593145 40.0 38.0 41.0 31.0 41.0 24-25 37.08136404407746 40.0 38.0 41.0 31.0 41.0 26-27 36.95074905467625 40.0 38.0 41.0 31.0 41.0 28-29 36.8272241556341 40.0 38.0 41.0 30.0 41.0 30-31 36.69084213969633 40.0 37.0 41.0 30.0 41.0 32-33 36.53100356841055 40.0 37.0 41.0 30.0 41.0 34-35 36.38431937339282 40.0 37.0 41.0 30.0 41.0 36-37 36.229517985490105 40.0 36.5 41.0 29.5 41.0 38-39 36.46405855100984 40.0 37.0 41.0 30.0 41.0 40-41 36.59141666807291 40.0 37.0 41.0 30.0 41.0 42-43 36.4510602683642 40.0 37.0 41.0 30.0 41.0 44-45 36.34617801033528 40.0 37.0 41.0 29.5 41.0 46-47 36.201449691122846 40.0 36.5 41.0 29.0 41.0 48-49 36.06345189525566 40.0 36.0 41.0 28.0 41.0 50-51 34.38479966146181 38.0 34.0 39.5 25.5 40.0 52-53 34.55896412248124 38.5 34.5 39.5 25.5 40.5 54-55 35.39382940167789 39.0 35.0 41.0 27.0 41.0 56-57 35.390841231043225 39.0 35.0 41.0 27.0 41.0 58-59 35.213873575199486 39.0 35.0 41.0 26.5 41.0 60-61 34.96639541208067 39.0 35.0 41.0 26.0 41.0 62-63 34.67833225809383 38.0 35.0 40.5 26.0 41.0 64-65 34.38162716405472 37.0 35.0 40.0 26.0 41.0 66-67 34.039789919402466 37.0 34.0 40.0 26.0 41.0 68-69 33.668285799958724 36.0 34.0 39.0 25.0 41.0 70-71 33.28943229950245 36.0 34.0 39.0 24.0 41.0 72-73 32.935521651256344 35.0 34.0 38.5 23.5 40.0 74-75 32.538164728423055 35.0 34.0 37.0 22.0 39.5 76-77 32.17511140736087 35.0 33.0 37.0 21.5 39.0 78-79 31.84445903337483 35.0 33.0 36.0 20.0 39.0 80-81 31.51656961386137 35.0 33.0 36.0 19.0 37.0 82-83 31.234296851776612 35.0 33.0 35.5 18.0 37.0 84-85 31.026504437472333 35.0 33.0 35.0 16.0 36.5 86-87 30.82490546762534 35.0 33.0 35.0 12.0 36.0 88-89 30.64831263118679 35.0 33.0 35.0 7.0 36.0 90-91 30.43064088601466 35.0 32.0 35.0 2.0 36.0 92-93 30.271653852494445 35.0 32.0 35.0 2.0 35.0 94-95 30.106482136529024 35.0 32.0 35.0 2.0 35.0 96-97 29.89394752658135 35.0 32.0 35.0 2.0 35.0 98-99 29.712700114620098 35.0 32.0 35.0 2.0 35.0 100-101 28.73668368876814 34.0 30.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 40822.0 3 6742.0 4 4806.0 5 3596.0 6 3144.0 7 3245.0 8 3362.0 9 3551.0 10 3807.0 11 4046.0 12 3992.0 13 4249.0 14 4440.0 15 4944.0 16 5116.0 17 5479.0 18 5106.0 19 4615.0 20 4498.0 21 4709.0 22 5372.0 23 6095.0 24 7188.0 25 8398.0 26 9978.0 27 11805.0 28 14354.0 29 17041.0 30 20474.0 31 25507.0 32 32948.0 33 43553.0 34 66772.0 35 101437.0 36 179755.0 37 366198.0 38 421071.0 39 78520.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.855733040907765 18.152135310452202 14.00545765834903 24.986673990291003 2 16.159195387372414 19.646585980313223 39.224670804872346 24.969547827442018 3 19.210297709556908 23.675616435510115 29.28089773838385 27.833188116549127 4 14.040306054868596 15.978276960956187 35.93021564609419 34.05120133808103 5 15.078430354105258 36.797145862279415 33.37717988339328 14.747243900222045 6 33.543582783043206 34.06346170947927 17.550344000295997 14.842611507181521 7 29.16638539389439 31.430674483453373 20.923903166006326 18.479036956645913 8 27.376250124144214 33.168997765079546 20.25747997302257 19.197272137753668 9 27.382494832940395 15.24983641972103 19.397700009347442 37.96996873799113 10-11 25.889348525691062 24.74229414122661 27.481040658111905 21.88731667497042 12-13 26.105030074111724 22.273051706828774 27.540881868837207 24.08103635022229 14-15 23.812284803621434 23.748362997942426 24.86490066311163 27.574451535324506 16-17 23.93689986282579 26.585796853627393 25.76778282199747 23.70952046154935 18-19 23.827935573540515 26.182970521733317 26.997973933133952 22.99111997159222 20-21 24.337315999554658 25.16295454995461 26.869153038837407 23.63057641165333 22-23 24.222328126562324 24.92439165964365 26.572679450503646 24.28060076329038 24-25 24.03991644037287 25.23241035762806 26.333391225589892 24.394281976409175 26-27 23.657527274049336 25.596932269985174 26.441057929275747 24.304482526689743 28-29 23.771403049391864 25.955535733934994 26.19160993647452 24.081451280198625 30-31 24.34999926972592 25.30636620486298 26.156113124323483 24.187521401087622 32-33 24.010771344873223 25.41457085012096 26.018081630877944 24.55657617412787 34-35 24.19673478316326 25.689654780709624 26.13423005683281 23.97938037929431 36-37 24.189355748841937 25.624724560416272 26.150420680214886 24.0354990105269 38-39 24.078237256847316 25.622484172783516 26.084213416468614 24.215065153900554 40-41 24.17462340382514 25.371565913782625 26.136652396951852 24.317158285440378 42-43 23.935455419072774 25.489045249908436 25.95383850920373 24.62166082181506 44-45 23.82922298674896 25.450195128148394 26.229700482922265 24.490881402180378 46-47 23.995742062019545 25.39617604415986 25.963738641112105 24.644343252708488 48-49 23.71925448804785 25.555480099026408 26.095095372539895 24.630170040385853 50-51 23.848261377017476 25.53379117808376 26.24265338535642 24.375294059542345 52-53 24.103387455677908 25.329296253548367 26.20777703257739 24.35953925819634 54-55 23.538303519990176 25.175294399384963 26.56153281016605 24.724869270458814 56-57 23.694092116051237 25.359650100561314 26.24525262517195 24.701005158215498 58-59 23.89117115852426 25.36487609778036 26.324176741906825 24.419776001788556 60-61 23.98951420836465 25.337381028282195 26.428822343692065 24.244282419661086 62-63 23.98097541303508 25.268280667251382 26.411432690092322 24.339311229621213 64-65 23.615252154759904 25.058907982011252 26.54844882959077 24.777391033638075 66-67 23.66622160541144 25.279035210313378 26.284046129965468 24.77069705430971 68-69 23.769425927057164 25.235704064351694 26.45107142346539 24.543798585125753 70-71 23.630065886537658 25.107452661209855 26.428302457513595 24.83417899473889 72-73 23.551301600442667 25.451902404091868 26.238688427860836 24.758107567604625 74-75 23.58147415892428 25.46833649851921 26.323992650487128 24.62619669206938 76-77 23.52273391860367 25.008545120184028 26.415240855421768 25.053480105790538 78-79 23.59623591686155 25.038965462106333 26.47948512292807 24.88531349810405 80-81 23.72065132605304 25.4001885075403 26.178854654186168 24.70030551222049 82-83 23.65089857762854 25.369990126663406 26.43490000240496 24.544211293303096 84-85 23.661972837950305 25.44679982620344 26.240323466987913 24.65090386885834 86-87 23.385776252932487 25.630358346588693 26.266258269299147 24.71760713117967 88-89 23.36127166878577 25.2285509247342 26.474367974789192 24.935809431690835 90-91 23.53458138325533 25.09464378575143 26.498602444097763 24.872172386895475 92-93 23.697368262814237 24.964076034969352 26.54505552653758 24.793500175678833 94-95 23.5209138577266 25.047477561529035 26.522614012788548 24.908994567955816 96-97 23.279535095848935 24.883372499022347 26.6711028080645 25.165989597064215 98-99 23.080028460515585 24.818960762128143 26.655990181187132 25.445020596169144 100-101 23.338027445603235 24.863548917916102 26.65303293615422 25.14539070032644 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43.0 1 39.0 2 41.5 3 49.5 4 50.5 5 53.0 6 87.5 7 184.5 8 319.5 9 392.5 10 327.0 11 273.5 12 278.0 13 296.5 14 337.5 15 380.5 16 411.0 17 456.5 18 504.5 19 535.0 20 585.0 21 631.5 22 694.0 23 776.0 24 865.5 25 1034.0 26 1271.0 27 1652.5 28 2204.0 29 3161.5 30 4852.5 31 7383.0 32 10886.0 33 14342.0 34 17651.0 35 21369.5 36 26210.5 37 31276.5 38 35331.5 39 38673.5 40 41478.5 41 44372.0 42 47266.0 43 50675.5 44 54511.5 45 58607.5 46 61815.0 47 64745.5 48 67933.5 49 68794.5 50 68291.0 51 67933.5 52 67081.0 53 66657.0 54 65871.0 55 63081.5 56 58311.5 57 52084.0 58 46796.5 59 40941.0 60 33767.0 61 27859.5 62 23095.5 63 17978.0 64 13228.0 65 9923.0 66 7605.5 67 5948.5 68 4457.5 69 3435.5 70 2695.5 71 1932.5 72 1381.5 73 1064.5 74 813.5 75 617.5 76 483.0 77 320.5 78 200.5 79 150.0 80 114.0 81 80.0 82 73.5 83 65.0 84 49.0 85 41.0 86 31.0 87 30.0 88 31.5 89 21.5 90 17.0 91 19.0 92 17.0 93 12.5 94 10.5 95 9.5 96 8.0 97 5.5 98 4.5 99 5.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.033814876208995405 2 0.04037015931285056 3 0.03349035724345802 4 0.04062977448528047 5 0.03387978000210288 6 0.012396624483528067 7 0.008177877931542074 8 0.012656239655957973 9 0.013889411725000031 10-11 0.01781609120800238 12-13 0.019308878449474345 14-15 0.03757929620922906 16-17 0.023689884484229026 18-19 0.020704310001285097 20-21 0.023268009829030427 22-23 0.03686535448504682 24-25 0.03404203948487158 26-27 0.029206706898364552 28-29 0.021840126380665938 30-31 0.014570901552628539 32-33 0.011228356207593484 34-35 0.011066096724824793 36-37 0.001492787241471966 38-39 0.007820907069450952 40-41 0.004316102241647206 42-43 0.14334002707786248 44-45 0.12211648673171759 46-47 0.1277955686286218 48-49 0.12724388638720824 50-51 0.12578355104229003 52-53 0.13019700897359845 54-55 0.12808763569760545 56-57 0.13814772362926434 58-59 0.13428594793936946 60-61 0.13555157190496528 62-63 0.13639532121536246 64-65 0.13717416673265218 66-67 0.12996984569772227 68-69 0.1264325889733648 70-71 0.11737850983487177 72-73 0.12244100569725495 74-75 0.12101312224889046 76-77 0.12020182483504702 78-79 0.14278834483644892 80-81 0.15200468345771065 82-83 0.14635805345736014 84-85 0.14028954880181108 86-87 0.15388689345782747 88-89 0.15278352897500036 90-91 0.15200468345771065 92-93 0.15729434259596997 94-95 0.17180034035549105 96-97 0.16995058225192797 98-99 0.1603448208720214 100-101 0.1716705327692761 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1540742.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.74065066666083 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2397364801691 51.145330125673794 2 11.167625086301074 14.236633788043093 3 3.5385077202557973 6.766403534343215 4 1.6380637601580281 4.17644999623799 5 0.9159775318273305 2.9192501937358037 6 0.5638593960278762 2.1564458872396326 7 0.39666092053073476 1.7698397618065975 8 0.2699298564363972 1.376440374689144 9 0.21232050132338937 1.2180102213802013 >10 1.0092381524339051 10.845967920714124 >50 0.03499185788572621 1.4783890918927647 >100 0.011759497380225541 1.3717173838203822 >500 0.0013292392703735034 0.5391217204232879 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.490379310747679E-5 2 0.0 0.0 0.0 0.0 6.490379310747679E-5 3 0.0 0.0 0.0 0.0 6.490379310747679E-5 4 0.0 0.0 0.0 0.0 6.490379310747679E-5 5 0.0 0.0 0.0 0.0 6.490379310747679E-5 6 0.0 0.0 0.0 0.0 1.2980758621495357E-4 7 0.0 0.0 0.0 0.0 1.9471137932243037E-4 8 0.0 0.0 0.0 0.0 1.9471137932243037E-4 9 0.0 0.0 0.0 0.0 2.5961517242990714E-4 10-11 0.0 0.0 0.0 0.0 2.5961517242990714E-4 12-13 0.0 0.0 0.0 0.0 4.867784483060759E-4 14-15 0.0 0.0 0.0 0.0 5.516822414135527E-4 16-17 0.0 0.0 0.0 0.0 5.841341379672911E-4 18-19 0.0 0.0 0.0 0.0 7.139417241822446E-4 20-21 0.0 0.0 0.0 0.0 7.46393620735983E-4 22-23 0.0 0.0 0.0 0.0 8.762012069509367E-4 24-25 0.0 0.0 0.0 6.490379310747679E-5 0.0010384606897196286 26-27 0.0 0.0 0.0 2.9206706898364553E-4 0.001070912586273367 28-29 6.490379310747679E-5 0.0 0.0 5.841341379672911E-4 0.0011033644828271055 30-31 6.490379310747679E-5 0.0 0.0 0.0027908631036215018 0.0011033644828271055 32-33 6.490379310747679E-5 0.0 0.0 0.008729560172955628 0.0011033644828271055 34-35 6.490379310747679E-5 0.0 0.0 0.018108158276986024 0.0011033644828271055 36-37 6.490379310747679E-5 0.0 0.0 0.03336054965724307 0.0011033644828271055 38-39 6.490379310747679E-5 0.0 0.0 0.05844586569328285 0.0011033644828271055 40-41 6.490379310747679E-5 0.0 0.0 0.08817180293650723 0.0011682682759345821 42-43 6.490379310747679E-5 0.0 0.0 0.12289533224900728 0.0011682682759345821 44-45 6.490379310747679E-5 0.0 0.0 0.16836043932079478 0.0012007201724883207 46-47 6.490379310747679E-5 0.0 0.0 0.22446976846220845 0.0013629796552570126 48-49 6.490379310747679E-5 0.0 0.0 0.287426447776461 0.0016225948276869196 50-51 6.490379310747679E-5 0.0 0.0 0.3523302408839377 0.0016874986207943965 52-53 6.490379310747679E-5 0.0 0.0 0.42385422088837715 0.0017199505173481349 54-55 6.490379310747679E-5 0.0 0.0 0.5176726538252349 0.0017848543104556115 56-57 6.490379310747679E-5 0.0 0.0 0.630410542452922 0.0018497581035630884 58-59 6.490379310747679E-5 0.0 0.0 0.7481135712533311 0.0018822100001168267 60-61 6.490379310747679E-5 0.0 0.0 0.8778238017786235 0.0018822100001168267 62-63 6.490379310747679E-5 0.0 0.0 1.0167503709251777 0.0018822100001168267 64-65 6.490379310747679E-5 0.0 0.0 1.1798536030042668 0.0018822100001168267 66-67 6.490379310747679E-5 0.0 0.0 1.3726827723265802 0.0018822100001168267 68-69 6.490379310747679E-5 0.0 0.0 1.5831333214775738 0.0018822100001168267 70-71 6.490379310747679E-5 0.0 0.0 1.8076679937328897 0.0018822100001168267 72-73 6.490379310747679E-5 0.0 0.0 2.0433985702992454 0.0021742770691004724 74-75 6.490379310747679E-5 0.0 0.0 2.3003202353151924 0.0022391808622079495 76-77 6.490379310747679E-5 0.0 0.0 2.612345220679387 0.0022716327587616876 78-79 6.490379310747679E-5 0.0 0.0 2.9592235429422966 0.0022716327587616876 80-81 6.490379310747679E-5 0.0 0.0 3.3267088195168304 0.0022716327587616876 82-83 6.490379310747679E-5 0.0 0.0 3.710906822816539 0.0022716327587616876 84-85 6.490379310747679E-5 0.0 0.0 4.125642060773316 0.0023040846553154257 86-87 6.490379310747679E-5 0.0 0.0 4.584446974250069 0.002368988448422903 88-89 6.490379310747679E-5 0.0 0.0 5.084368440660409 0.002401440344976641 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1480 0.0 58.699768 1 GTATCAA 2990 0.0 47.79058 1 TCAACGC 3845 0.0 36.303993 4 ATCAACG 3880 0.0 35.85181 3 CAACGCA 3965 0.0 35.323856 5 TATCAAC 3980 0.0 35.189583 2 AACGCAG 4185 0.0 33.45824 6 ACGCAGA 5060 0.0 27.113167 7 GTACATG 6040 0.0 26.644634 1 CGCAGAG 5090 0.0 26.488762 8 TCTATAC 305 0.0 26.462097 3 GTAAGTA 955 0.0 25.35374 2 TACATGG 6410 0.0 24.886076 2 ACATGGG 6470 0.0 24.581915 3 GCAGAGT 5525 0.0 22.942465 9 CATGGGG 5645 0.0 21.615862 4 TGTAAGT 1065 0.0 21.396297 1 ATGGGGG 3715 0.0 20.959183 5 TAAGTAC 1230 0.0 20.457188 3 AGAGTAC 4875 0.0 19.525442 10-11 >>END_MODULE