##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921354_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1540742 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.62024076711091 31.0 31.0 34.0 25.0 34.0 2 29.81063474611583 31.0 31.0 34.0 25.0 34.0 3 29.85541122394275 31.0 31.0 34.0 25.0 34.0 4 33.33931443421417 37.0 35.0 37.0 28.0 37.0 5 32.94386341126548 37.0 35.0 37.0 26.0 37.0 6 32.86989969767813 37.0 35.0 37.0 25.0 37.0 7 32.67087091803819 37.0 35.0 37.0 23.0 37.0 8 32.601058451057995 37.0 35.0 37.0 23.0 37.0 9 34.021192386525456 39.0 35.0 39.0 23.0 39.0 10-11 33.810113244138215 38.5 35.0 39.0 20.0 39.0 12-13 33.70148473917112 38.0 35.0 39.0 18.0 39.0 14-15 34.68994354668075 39.0 35.0 41.0 17.0 41.0 16-17 34.628359582590726 39.0 35.0 41.0 17.0 41.0 18-19 34.55778903930704 39.0 35.0 41.0 17.5 41.0 20-21 34.49635078423253 39.0 34.5 41.0 18.0 41.0 22-23 34.35885242305331 39.0 34.0 41.0 16.5 41.0 24-25 34.24441113437551 39.0 34.0 41.0 16.0 41.0 26-27 34.05716628741217 39.0 34.0 41.0 11.0 41.0 28-29 33.870933939621295 39.0 34.0 40.5 10.0 41.0 30-31 33.68706993124092 39.0 34.0 40.0 9.0 41.0 32-33 33.620426716478164 38.5 33.5 40.0 9.0 41.0 34-35 33.744166122556535 39.0 34.0 40.5 8.0 41.0 36-37 33.699727793491704 39.0 34.0 41.0 8.0 41.0 38-39 33.59066410859184 39.0 34.0 41.0 4.0 41.0 40-41 33.4396031262859 39.0 33.0 41.0 2.0 41.0 42-43 33.29741222086501 39.0 33.0 40.5 2.0 41.0 44-45 33.132185012156484 38.0 33.0 40.0 2.0 41.0 46-47 32.95074061718315 38.0 33.0 40.0 2.0 41.0 48-49 32.77217210928241 38.0 33.0 40.0 2.0 41.0 50-51 32.598278621599206 38.0 32.5 40.0 2.0 41.0 52-53 32.40585672357864 38.0 32.0 40.0 2.0 41.0 54-55 32.17734701851445 38.0 32.0 40.0 2.0 41.0 56-57 31.903006473504327 37.0 31.5 40.0 2.0 41.0 58-59 31.655378707142404 37.0 31.0 40.0 2.0 41.0 60-61 31.370768759467843 36.0 31.0 40.0 2.0 41.0 62-63 31.082624151220646 36.0 31.0 39.0 2.0 41.0 64-65 30.759702468031634 35.5 30.5 39.0 2.0 40.5 66-67 30.433529753845875 35.0 30.0 39.0 2.0 40.0 68-69 30.086679015695033 35.0 30.0 38.0 2.0 40.0 70-71 29.725226222170875 35.0 29.0 37.0 2.0 39.5 72-73 29.34487247053692 35.0 29.0 37.0 2.0 39.0 74-75 28.943517798567186 34.5 29.0 36.0 2.0 39.0 76-77 26.451798549010803 31.0 25.0 34.0 2.0 36.0 78-79 27.981190231719523 34.0 27.5 35.0 2.0 37.0 80-81 28.208140298635335 34.0 29.0 35.0 2.0 37.0 82-83 28.064655211579876 34.0 29.0 35.0 2.0 36.0 84-85 27.844399646404135 34.0 28.5 35.0 2.0 36.0 86-87 27.59519406883177 34.0 27.5 35.0 2.0 35.5 88-89 27.306040855639687 34.0 27.0 35.0 2.0 35.0 90-91 27.09055312310562 34.0 26.5 35.0 2.0 35.0 92-93 26.922106361739992 34.0 26.0 35.0 2.0 35.0 94-95 26.78532486295564 34.0 26.0 35.0 2.0 35.0 96-97 26.55518152941894 34.0 25.0 35.0 2.0 35.0 98-99 26.219097681506703 33.5 25.0 35.0 2.0 35.0 100-101 25.091963482529845 32.0 21.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 87282.0 3 20372.0 4 10590.0 5 7005.0 6 6016.0 7 5769.0 8 5850.0 9 5948.0 10 6544.0 11 6803.0 12 7035.0 13 7560.0 14 7924.0 15 8442.0 16 8872.0 17 9507.0 18 8605.0 19 7584.0 20 7244.0 21 7275.0 22 7762.0 23 8743.0 24 10267.0 25 12381.0 26 14724.0 27 17569.0 28 20687.0 29 25086.0 30 30148.0 31 37350.0 32 46869.0 33 61953.0 34 89211.0 35 133100.0 36 220527.0 37 331914.0 38 216407.0 39 13817.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.397564681647477 26.09515593300276 16.197972257067445 27.309307128282317 2 12.384657472365499 26.073820515766155 32.43311480155276 29.108407210315583 3 14.466653036454327 28.92408945313641 28.06902079905497 28.54023671135429 4 12.660527473839847 21.47748234246467 31.78116209364303 34.08082809005246 5 14.318422745576129 38.538504033564244 33.17130265266815 13.971770568191483 6 33.28973910966533 36.90472790713976 16.22217866405664 13.583354319138275 7 28.155654872782076 32.79030493100078 20.94237711440332 18.111663081813827 8 27.646458267482473 35.27161493033493 18.959985824891984 18.12194097729062 9 26.880295338220154 15.349098031987186 18.974429203591516 38.79617742620114 10-11 26.018752991652278 26.302866595527313 26.943120774747825 20.735259638072588 12-13 26.372887824320724 23.489824204545933 27.152188932652145 22.985099038481195 14-15 24.004792676499527 24.790677387446095 24.38566247199296 26.81886746406142 16-17 24.109801890457074 27.888931184623477 25.034715495199215 22.966551429720226 18-19 24.232735825911547 27.160820751667714 26.449763554254012 22.15667986816673 20-21 24.81997987318353 25.883793434348192 26.450927011570162 22.84529968089812 22-23 24.67024784511084 25.66324439449732 26.114845426598443 23.551662333793395 24-25 24.343676424534593 26.151269939914553 25.865397565103386 23.63965607044747 26-27 24.063734831530684 26.429126836183126 26.003799581487847 23.503338750798342 28-29 24.260772710367 26.668036237147298 25.853693523878885 23.217497528606824 30-31 24.729899515836344 26.234678996930526 25.731430520713683 23.303990966519454 32-33 24.653612302187625 26.28018771748123 25.429493481527015 23.636706498804127 34-35 24.715648531654 26.505977173991358 25.615486323283427 23.162887971071218 36-37 24.706340882126156 26.379376815695398 25.729912794697583 23.18436950748086 38-39 24.84061219973013 26.21294067327432 25.619556589402876 23.326890537592675 40-41 24.847930580468194 26.236944325538087 25.503460688801532 23.411664405192184 42-43 24.56502760261324 26.333412306124504 25.43416103309393 23.66739905816833 44-45 24.6065877943634 26.132268028221628 25.426078230342046 23.835065947072927 46-47 24.69611817994166 26.132019011194586 25.397581148746628 23.774281660117126 48-49 24.2621360987921 26.358754920390933 25.62277349064736 23.756335490169604 50-51 24.541877510326906 26.177046362671003 25.51280769760021 23.768268429401886 52-53 24.774235506433886 26.045889896829998 25.48072819697678 23.699146399759332 54-55 24.118388113678655 26.02294108827704 25.819887858280072 24.03878293976423 56-57 24.47219260795415 25.99181834851369 25.4829722015328 24.053016841999362 58-59 24.55203315332765 25.99189471371372 25.71602807867976 23.74004405427887 60-61 24.644999815011104 26.06860297033752 25.777553771728893 23.508843442922487 62-63 24.627954696972548 26.06076323410178 25.679678487942976 23.6316035809827 64-65 24.226158246889245 25.80493955081536 25.814580517327123 24.154321684968274 66-67 24.395414047805936 26.198930186869955 25.503012785429043 23.90264297989507 68-69 24.356888212433088 25.944546854139706 25.597522431943 24.10104250148421 70-71 24.298144921062402 25.825669846332044 25.65351732627626 24.222667906329292 72-73 24.319707245441617 26.206875733168527 25.346126955089026 24.127290066300834 74-75 24.279115814074267 26.13863282264347 25.290119449493638 24.292131913788626 76-77 24.101843813908424 25.762121670259358 25.75796000247099 24.37807451336123 78-79 24.097548875734727 25.745992929998675 25.80031012423151 24.35614807003509 80-81 24.36612941556898 25.995836531256533 25.457124453431096 24.180909599743387 82-83 24.306534491751837 25.96405492350043 25.614640294436597 24.114770290311135 84-85 24.14313269375722 26.01846014811487 25.56598071403391 24.272426444094005 86-87 24.064308314116634 26.209141985345624 25.368186109224894 24.358363591312852 88-89 24.044644974041766 26.002627208027196 25.45506996185377 24.497657856077264 90-91 23.935896768483932 25.888569309056837 25.61636971771412 24.55916420474511 92-93 24.149515878019308 25.776111195154428 25.55773202502774 24.51664090179852 94-95 24.008041851378277 25.91884155800323 25.5674081093536 24.505708481264886 96-97 23.721118617763405 25.87396678054839 25.623290678801936 24.78162392288627 98-99 23.541075430030844 25.69131890188595 25.56624852140135 25.20135714668185 100-101 23.594864229326102 25.679048083269997 25.62910399857729 25.096983688826608 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 41.0 2 29.5 3 46.0 4 47.0 5 54.0 6 94.0 7 194.0 8 282.5 9 301.5 10 270.0 11 216.0 12 208.5 13 227.5 14 247.5 15 265.5 16 315.5 17 365.0 18 396.0 19 425.0 20 476.5 21 555.0 22 647.0 23 756.5 24 869.5 25 1090.5 26 1428.0 27 1946.0 28 2683.5 29 3851.0 30 5819.0 31 8733.0 32 12710.5 33 16024.0 34 18946.0 35 22830.5 36 27487.0 37 32262.0 38 36169.0 39 39316.0 40 42266.5 41 45128.0 42 48279.0 43 51710.0 44 55160.5 45 59430.0 46 62832.5 47 65739.5 48 68615.5 49 69192.5 50 68256.5 51 67407.0 52 66440.5 53 65411.5 54 64028.0 55 60863.5 56 56578.0 57 50882.0 58 44686.5 59 38833.0 60 32306.0 61 26802.0 62 22505.5 63 17544.0 64 12730.0 65 9468.0 66 7196.0 67 5578.5 68 4346.0 69 3289.0 70 2409.5 71 1755.0 72 1262.5 73 943.5 74 728.0 75 523.5 76 367.0 77 248.0 78 139.5 79 76.0 80 51.5 81 29.0 82 17.5 83 6.5 84 3.5 85 5.0 86 5.5 87 3.0 88 1.0 89 1.5 90 1.0 91 0.5 92 1.5 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09054079138493011 2 3.245189655373839E-4 3 0.003050478276051409 4 0.0025961517242990713 5 0.0190168113804907 6 0.0011682682759345821 7 0.0 8 8.437493103971983E-4 9 0.0 10-11 0.06756484862488334 12-13 1.6225948276869196E-4 14-15 0.003764420000233654 16-17 2.2716327587616876E-4 18-19 5.192303448598143E-4 20-21 7.46393620735983E-4 22-23 9.735568966121517E-5 24-25 0.0012656239655957973 26-27 0.002985574482943932 28-29 0.007334128621144877 30-31 0.016258400173422935 32-33 0.015284843276810784 34-35 0.00850239689707946 36-37 6.490379310747678E-4 38-39 1.9471137932243035E-4 40-41 0.005224755345151881 42-43 0.008242781724649552 44-45 0.009768020862675256 46-47 0.011423067586915915 48-49 0.013889411725000031 50-51 0.0068798020693925386 52-53 0.0021093732759929957 54-55 8.437493103971983E-4 56-57 0.006457927414193941 58-59 0.009248790517815441 60-61 0.007074513448714971 62-63 0.01758892793212621 64-65 0.028557668967289784 66-67 0.030699494139836518 68-69 0.02339781741524538 70-71 0.03491824069182251 72-73 0.022002385863434632 74-75 0.02219709724275706 76-77 0.18802628863236026 78-79 0.046341308278738426 80-81 0.04413457931308421 82-83 0.02002282017365659 84-85 0.02927161069147203 86-87 0.06915499155601652 88-89 0.21862842708253558 90-91 0.2597449800161221 92-93 0.034463914140070176 94-95 0.003374997241588793 96-97 0.007042061552161231 98-99 6.165860345210295E-4 100-101 0.001233172069042059 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1540742.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.25016770267891 #Duplication Level Percentage of deduplicated Percentage of total 1 82.83661507143665 55.70776255476374 2 9.760545108345992 13.127965908116607 3 3.0288228102318553 6.110665257893745 4 1.4475395513250187 3.8938911033147234 5 0.7577482208359138 2.5479347463810886 6 0.5052441187551092 2.038665103024399 7 0.3550954834333287 1.6716161567948635 8 0.23496643124701777 1.2641225524689537 9 0.18671658222073706 1.130104932049404 >10 0.8485607028811107 9.637979099823136 >50 0.027943874435000002 1.2680301950549953 >100 0.00923050197784367 1.1620709667555331 >500 9.71542874456592E-4 0.4391914235588013 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 3.245189655373839E-5 14-15 0.0 0.0 0.0 0.0 6.490379310747679E-5 16-17 0.0 0.0 0.0 0.0 1.2980758621495357E-4 18-19 0.0 0.0 0.0 0.0 1.9471137932243037E-4 20-21 0.0 0.0 0.0 0.0 3.245189655373839E-4 22-23 0.0 0.0 0.0 0.0 3.8942275864486074E-4 24-25 0.0 0.0 0.0 9.735568966121519E-5 4.543265517523375E-4 26-27 0.0 0.0 0.0 2.2716327587616876E-4 5.841341379672911E-4 28-29 0.0 0.0 0.0 5.192303448598143E-4 5.841341379672911E-4 30-31 0.0 0.0 0.0 0.0024014403449766413 5.841341379672911E-4 32-33 0.0 0.0 0.0 0.007820907069450952 5.841341379672911E-4 34-35 0.0 0.0 0.0 0.016420659656191626 6.490379310747678E-4 36-37 0.0 0.0 0.0 0.030634590346729045 6.490379310747678E-4 38-39 0.0 0.0 0.0 0.05354562931366835 6.490379310747678E-4 40-41 0.0 0.0 0.0 0.08035089586705627 6.490379310747678E-4 42-43 0.0 0.0 0.0 0.11199149500695119 6.490379310747678E-4 44-45 0.0 0.0 0.0 0.15356237449229007 6.490379310747678E-4 46-47 0.0 0.0 0.0 0.2038952660471383 7.139417241822446E-4 48-49 0.0 0.0 0.0 0.26065363311962675 7.139417241822446E-4 50-51 0.0 0.0 0.0 0.31945646967500074 7.139417241822446E-4 52-53 0.0 0.0 0.0 0.3832244464030967 8.112974138434598E-4 54-55 0.0 0.0 0.0 0.4678914445118002 9.411050000584134E-4 56-57 0.0 0.0 0.0 0.5699526591733074 9.735568966121518E-4 58-59 0.0 0.0 0.0 0.6760054571109245 9.735568966121518E-4 60-61 0.0 0.0 0.0 0.792410410049184 9.735568966121518E-4 62-63 0.0 0.0 0.0 0.9191350660915325 9.735568966121518E-4 64-65 0.0 0.0 0.0 1.0674726852386707 0.0010060087931658902 66-67 0.0 0.0 0.0 1.2403114862838813 0.0010384606897196286 68-69 0.0 3.245189655373839E-5 0.0 1.431647868364723 0.0010384606897196286 70-71 6.490379310747679E-5 6.490379310747679E-5 0.0 1.6372306330326558 0.0011033644828271055 72-73 6.490379310747679E-5 6.490379310747679E-5 0.0 1.8523218033908337 0.0011033644828271055 74-75 6.490379310747679E-5 6.490379310747679E-5 0.0 2.0885067065089418 0.0011033644828271055 76-77 6.490379310747679E-5 6.490379310747679E-5 0.0 2.3747324341129143 0.0011033644828271055 78-79 6.490379310747679E-5 6.490379310747679E-5 0.0 2.6954220758569574 0.0011033644828271055 80-81 6.490379310747679E-5 6.490379310747679E-5 0.0 3.036848479498839 0.0011033644828271055 82-83 6.490379310747679E-5 6.490379310747679E-5 0.0 3.390152277279389 0.001233172069042059 84-85 1.2980758621495357E-4 6.490379310747679E-5 0.0 3.7714620617858152 0.001233172069042059 86-87 1.2980758621495357E-4 6.490379310747679E-5 0.0 4.1953811864673 0.0012656239655957973 88-89 1.2980758621495357E-4 6.490379310747679E-5 0.0 4.656457732702815 0.0012980758621495357 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1485 0.0 55.347473 1 GTATCAA 2635 0.0 42.911575 1 TATCAAC 4115 0.0 31.057076 1 TCAACGC 4415 0.0 28.811987 3 ATCAACG 4420 0.0 28.564621 2 CAACGCA 4560 0.0 27.999905 4 AACGCAG 4975 0.0 25.979967 5 TATACCG 210 3.4338882E-8 22.627861 5 ACGCAGA 6380 0.0 22.4887 1 TTATATG 715 0.0 21.9067 2 CGCAGAG 6535 0.0 21.49885 2 TAAGGTG 695 0.0 20.511585 5 TATGTAA 965 0.0 19.674414 2 ATTATAT 945 0.0 19.606989 1 ATATGTA 1005 0.0 18.909151 1 GTACATG 5775 0.0 18.839163 1 AGAGTAC 6025 0.0 18.770798 5 TATATGT 790 0.0 18.625319 3 CAGAGTA 6310 0.0 18.598932 9 ATGTAAG 1080 0.0 18.458426 3 >>END_MODULE