##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921352_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2345871 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.913274003557742 33.0 31.0 34.0 28.0 34.0 2 30.981166057298122 33.0 31.0 34.0 28.0 34.0 3 31.03491624219746 34.0 31.0 34.0 27.0 34.0 4 34.46187663345512 37.0 35.0 37.0 32.0 37.0 5 34.464991041706895 37.0 35.0 37.0 32.0 37.0 6 34.512985155620235 37.0 35.0 37.0 32.0 37.0 7 34.444672788912946 37.0 35.0 37.0 32.0 37.0 8 34.41966288853905 37.0 35.0 37.0 32.0 37.0 9 36.054945902822446 39.0 37.0 39.0 32.0 39.0 10-11 35.96322197597395 39.0 37.0 39.0 31.0 39.0 12-13 35.86579014788111 39.0 37.0 39.0 31.0 39.0 14-15 37.10015448419799 40.0 38.0 41.0 31.0 41.0 16-17 37.05311864974672 40.0 38.0 41.0 31.0 41.0 18-19 37.008508566754095 40.0 38.0 41.0 31.0 41.0 20-21 36.95638229894142 40.0 38.0 41.0 31.0 41.0 22-23 36.84970443813833 40.0 38.0 41.0 30.0 41.0 24-25 36.7599407640062 40.0 38.0 41.0 30.0 41.0 26-27 36.63215283363834 40.0 37.0 41.0 30.0 41.0 28-29 36.50494016934435 40.0 37.0 41.0 30.0 41.0 30-31 36.37240773256501 40.0 37.0 41.0 29.5 41.0 32-33 36.20788824278914 40.0 37.0 41.0 29.0 41.0 34-35 36.0503947147989 40.0 36.0 41.0 28.0 41.0 36-37 35.89818003632766 40.0 36.0 41.0 27.5 41.0 38-39 36.12817030433472 40.0 37.0 41.0 28.5 41.0 40-41 36.25156391805005 40.0 37.0 41.0 29.0 41.0 42-43 36.11223549803037 40.0 37.0 41.0 28.0 41.0 44-45 36.0128928658055 40.0 36.5 41.0 28.0 41.0 46-47 35.86842903978949 40.0 36.0 41.0 27.0 41.0 48-49 35.734725183098305 40.0 36.0 41.0 27.0 41.0 50-51 34.0639640883919 38.0 33.5 39.5 24.0 40.0 52-53 34.23705395565229 38.5 34.5 39.5 23.5 40.0 54-55 35.090202956599065 39.0 35.0 40.5 25.0 41.0 56-57 35.10613946802702 39.0 35.0 41.0 25.0 41.0 58-59 34.9410619765537 39.0 35.0 41.0 25.0 41.0 60-61 34.71322250882508 39.0 35.0 41.0 24.5 41.0 62-63 34.436710501131564 38.0 35.0 41.0 23.5 41.0 64-65 34.163829980420914 37.5 34.5 40.0 23.0 41.0 66-67 33.83156618586444 37.0 34.0 40.0 22.5 41.0 68-69 33.476094380296274 36.5 34.0 39.5 22.0 41.0 70-71 33.108015103984826 36.0 34.0 39.0 21.0 41.0 72-73 32.75117600243151 35.5 34.0 39.0 20.0 40.5 74-75 32.35691284814894 35.0 33.0 37.5 18.5 39.5 76-77 31.983430887717187 35.0 33.0 37.0 17.5 39.0 78-79 31.637749049287024 35.0 33.0 36.5 14.0 39.0 80-81 31.287445260203995 35.0 33.0 36.0 9.0 38.0 82-83 30.988258305763615 35.0 33.0 36.0 7.0 37.0 84-85 30.75069110790832 35.0 32.0 35.0 2.0 37.0 86-87 30.52871556023328 35.0 32.0 35.0 2.0 36.0 88-89 30.33659054568644 35.0 32.0 35.0 2.0 36.0 90-91 30.100417286372526 35.0 32.0 35.0 2.0 36.0 92-93 29.926627252734697 35.0 32.0 35.0 2.0 35.5 94-95 29.744444174466544 35.0 32.0 35.0 2.0 35.0 96-97 29.519784335967323 35.0 31.5 35.0 2.0 35.0 98-99 29.32553814766456 35.0 31.0 35.0 2.0 35.0 100-101 28.333278343097298 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 70001.0 3 11809.0 4 7865.0 5 5912.0 6 5338.0 7 5292.0 8 5518.0 9 6191.0 10 6222.0 11 6928.0 12 7032.0 13 7071.0 14 7587.0 15 8530.0 16 8504.0 17 8972.0 18 8197.0 19 7556.0 20 7623.0 21 7873.0 22 8672.0 23 9931.0 24 11705.0 25 13837.0 26 16386.0 27 19553.0 28 23035.0 29 27761.0 30 33271.0 31 40519.0 32 51328.0 33 67839.0 34 99742.0 35 151100.0 36 264709.0 37 524427.0 38 635085.0 39 136925.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.848028220187054 18.12026330198705 12.974650616548997 25.057057861276906 2 15.843363936909553 19.10740422308881 40.13456873522277 24.914663104778867 3 19.333150817186198 23.519295112405214 29.225653923798657 27.921900146609936 4 13.174135345015452 15.64752688566412 36.79048906171303 34.3878487076074 5 14.220554565508758 37.19878021686076 34.411794932808306 14.168870284822177 6 33.30786661522162 35.13149395982597 17.379628188757838 14.181011236194575 7 28.90107416495995 31.548799557987685 21.129280075851494 18.42084620120087 8 26.52236900783706 34.96782379359477 19.887939656929245 18.62186754163892 9 26.737099260074054 15.632539687615246 19.610147921236578 38.02021313107412 10-11 25.634772442923403 25.196480103211876 27.819817507519296 21.34892994634543 12-13 25.985339030131605 22.551399306987133 27.771507850862815 23.691753812018447 14-15 23.278605963792177 24.175997796178965 25.02929615039202 27.51610008963684 16-17 23.457398897597674 27.279841984025722 25.87490259909842 23.387856519278184 18-19 23.423066969156523 26.689066321938515 27.111228976606778 22.776637732298184 20-21 23.897473833890643 25.922649154018423 27.129226843299676 23.050650168791257 22-23 23.749351280147614 25.7076430179407 26.746938063618682 23.796067638293 24-25 23.50366220978589 25.87803806276106 26.77130468395704 23.846995043496 26-27 23.28223907100359 26.13192548909163 26.8308516759795 23.754983763925278 28-29 23.330360176871544 26.438083235021626 26.647042697056534 23.584513891050303 30-31 23.81403683119006 25.969546726660013 26.63860980174101 23.57780664040892 32-33 23.51015342796764 26.103644132719943 26.504618527570695 23.88158391174172 34-35 23.800271692501894 26.270742238932943 26.53431338171901 23.39467268684615 36-37 23.740466362027906 26.100070401265903 26.604389006319064 23.55507423038713 38-39 23.60194072939776 26.257590432942436 26.562529308748374 23.57793952891143 40-41 23.742680784697892 26.01640936578204 26.602522087932257 23.63838776158781 42-43 23.491081011618466 25.990839796337458 26.52117187079741 23.99690732124667 44-45 23.504791824286613 26.120665829346816 26.62337787063942 23.75116447572715 46-47 23.58837696326139 26.071880744009583 26.3958930411524 23.943849251576626 48-49 23.461819942028317 26.19540183519369 26.46022498442499 23.882553238352997 50-51 23.558725377958424 26.18610093062844 26.578487039413197 23.676686651999944 52-53 23.657970983560197 26.09684596955355 26.52930724450539 23.715875802380864 54-55 23.325161070833175 25.960347559131513 26.810847659337245 23.903643710698066 56-57 23.414467444929716 26.104463361578116 26.52613932019987 23.954929873292297 58-59 23.464405585823066 26.101076290134095 26.67970096529938 23.754817158743457 60-61 23.66128374005536 26.158799181034702 26.708283741762962 23.471633337146976 62-63 23.538023803831837 26.01505669205287 26.79344113930535 23.653478364809946 64-65 23.30300259962471 25.888539516366066 26.798995156147175 24.009462727862047 66-67 23.362112866824862 26.04370630191532 26.625273143043504 23.968907688216312 68-69 23.407746016243642 26.011001830792747 26.755633774860726 23.82561837810288 70-71 23.33545671345572 25.802440286602966 26.789737351750187 24.072365648191127 72-73 23.24381000877356 26.101267503103614 26.615537717239523 24.039384770883306 74-75 23.253309544592152 26.115940235056094 26.71553175732923 23.915218463022523 76-77 23.250297496589674 25.787875114602343 26.729172250952242 24.232655137855737 78-79 23.16283505725695 25.849760894850725 26.81892494363104 24.168479104261287 80-81 23.35462911629581 26.07247255162361 26.526090447339527 24.046807884741046 82-83 23.38901990033927 26.012163963101237 26.66826484744454 23.93055128911496 84-85 23.356652253236085 26.063135479345647 26.579875856795805 24.000336410622463 86-87 23.18386126984005 26.204535954292897 26.592637282919227 24.018965492947824 88-89 23.11384307176065 25.92895901297591 26.727654013830925 24.229543901432514 90-91 23.300991393011895 25.845920460132398 26.7706854742212 24.082402672634508 92-93 23.327700665138764 25.7741431708257 26.86750704795169 24.030649116083847 94-95 23.270433000010033 25.719764591888744 26.822607565676606 24.18719484242462 96-97 23.147095987903025 25.570098853717084 26.974266603978318 24.308538554401572 98-99 23.006382258286965 25.528371309342894 26.875020549018537 24.5902258833516 100-101 23.161071640181703 25.541675785607907 26.919669689706893 24.377582884503493 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 32.0 1 26.5 2 32.5 3 50.0 4 58.5 5 66.0 6 104.5 7 210.5 8 339.0 9 411.0 10 391.0 11 356.5 12 369.0 13 433.0 14 482.5 15 514.5 16 587.5 17 658.5 18 737.5 19 822.5 20 913.5 21 1009.5 22 1155.0 23 1358.0 24 1655.5 25 2142.5 26 3036.5 27 4494.0 28 6657.5 29 9806.5 30 13882.5 31 19043.0 32 25725.0 33 31351.5 34 36293.5 35 41981.0 36 48821.5 37 55576.0 38 60675.0 39 65701.0 40 69601.5 41 73161.0 42 77086.0 43 81149.0 44 84982.5 45 88654.5 46 91749.0 47 94529.5 48 97374.0 49 98734.0 50 98318.0 51 96888.5 52 94972.0 53 92689.0 54 89709.5 55 85304.5 56 79117.0 57 71242.0 58 63625.5 59 55529.5 60 46402.0 61 38617.0 62 32051.0 63 25015.5 64 18462.0 65 13746.5 66 10571.0 67 8372.5 68 6572.0 69 5204.5 70 4177.0 71 3286.5 72 2469.0 73 1918.5 74 1624.5 75 1349.0 76 1037.5 77 704.5 78 458.5 79 315.5 80 229.5 81 182.0 82 148.0 83 102.5 84 69.5 85 69.5 86 63.0 87 41.5 88 36.0 89 38.0 90 32.5 91 26.5 92 25.5 93 25.0 94 18.0 95 15.0 96 14.0 97 8.0 98 4.0 99 3.5 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0376406034261901 2 0.04463161017805327 3 0.037214322526686244 4 0.044077445008698264 5 0.03683066971713278 6 0.013896757323825564 7 0.010017601138340514 8 0.014877203392684422 9 0.015601880921840972 10-11 0.0172430623849308 12-13 0.019608921377177176 14-15 0.03636176072767854 16-17 0.022955226438282413 18-19 0.019097384297772555 20-21 0.02210266463927471 22-23 0.03700118207693432 24-25 0.032844943306771776 26-27 0.026877010713717845 28-29 0.01875635957816947 30-31 0.011829294961231883 32-33 0.008951898889580884 34-35 0.008717444394853767 36-37 0.0013854129233875179 38-39 0.0066073539423097015 40-41 0.0032610488812044656 42-43 0.15196914067312312 44-45 0.13123057491226076 46-47 0.13696405301058753 48-49 0.1353654996374481 50-51 0.13440636761356445 52-53 0.13783792885457044 54-55 0.1360049209867039 56-57 0.14632091875469708 58-59 0.14210073784960894 60-61 0.1450633901011607 62-63 0.1445518530217561 64-65 0.1456814974054413 66-67 0.13785924289954563 68-69 0.13513104514272098 70-71 0.12398379962069525 72-73 0.12944019513434457 74-75 0.12899260018986553 76-77 0.12733010468180048 78-79 0.1488359760617698 80-81 0.1577878749513507 82-83 0.15450551202517104 84-85 0.14900648842157133 86-87 0.16318032833007443 88-89 0.16200805585643882 90-91 0.1603881884383242 92-93 0.16533304687256886 94-95 0.17692788733907364 96-97 0.17596875531518996 98-99 0.166675831706006 100-101 0.17620320980991708 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2345871.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.06955750403341 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68037217986684 52.49836117004663 2 11.36886955571294 14.79534622622636 3 3.384972814455947 6.607760495994933 4 1.5013571521654625 3.9077058218768967 5 0.821269417445891 2.6719818792399717 6 0.5160617233925431 2.0147944791553005 7 0.34222012012321834 1.5587678249776484 8 0.2546304636192349 1.3254953275800399 9 0.1800121497819868 1.05419798384973 >10 0.8996341627866657 10.06368730305727 >50 0.03798147673318291 1.6557433258369387 >100 0.011634872673014152 1.354677471527021 >500 8.527230773223281E-4 0.3982210024826403 >1k 1.3118816574184667E-4 0.09325968814837125 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.2628089950385166E-5 0.0 3 0.0 0.0 0.0 4.2628089950385166E-5 0.0 4 0.0 0.0 0.0 4.2628089950385166E-5 0.0 5 0.0 0.0 0.0 4.2628089950385166E-5 0.0 6 0.0 0.0 0.0 4.2628089950385166E-5 0.0 7 0.0 0.0 0.0 4.2628089950385166E-5 0.0 8 0.0 0.0 0.0 4.2628089950385166E-5 4.2628089950385166E-5 9 0.0 0.0 0.0 8.525617990077033E-5 8.525617990077033E-5 10-11 0.0 0.0 0.0 1.278842698511555E-4 8.525617990077033E-5 12-13 0.0 0.0 0.0 1.278842698511555E-4 1.9182640477673327E-4 14-15 0.0 0.0 0.0 1.278842698511555E-4 4.262808995038517E-4 16-17 0.0 0.0 0.0 1.278842698511555E-4 5.11537079404622E-4 18-19 0.0 0.0 0.0 1.491983148263481E-4 5.541651693550071E-4 20-21 0.0 0.0 0.0 1.7051235980154066E-4 6.607353942309701E-4 22-23 0.0 0.0 0.0 1.7051235980154066E-4 9.165039339332811E-4 24-25 0.0 0.0 0.0 1.7051235980154066E-4 0.001023074158809244 26-27 0.0 2.1314044975192583E-5 0.0 2.1314044975192584E-4 0.0010657022487596292 28-29 0.0 4.2628089950385166E-5 0.0 7.033634841813552E-4 0.0011083303387100143 30-31 0.0 8.525617990077033E-5 0.0 0.0037725859606090872 0.0011296443836852068 32-33 0.0 8.525617990077033E-5 0.0 0.011275129791876875 0.0013427848334371328 34-35 0.0 8.525617990077033E-5 0.0 0.020994334300564695 0.0014067269683627104 36-37 0.0 8.525617990077033E-5 0.0 0.03768323151614049 0.0014067269683627104 38-39 0.0 1.278842698511555E-4 0.0 0.06711792762688144 0.0014067269683627104 40-41 0.0 1.278842698511555E-4 0.0 0.10275501082540345 0.0014919831482634808 42-43 0.0 1.278842698511555E-4 0.0 0.1413760603204524 0.0015132971932386734 44-45 0.0 1.278842698511555E-4 0.0 0.18737176937691802 0.0015559252831890587 46-47 0.0 1.278842698511555E-4 0.0 0.2463690458682511 0.0016198674181146363 48-49 0.0 1.278842698511555E-4 0.0 0.31259178360617446 0.0016624955080650214 50-51 0.0 1.278842698511555E-4 0.0 0.3813935207860961 0.0017051235980154067 52-53 0.0 1.278842698511555E-4 0.0 0.4583798512364917 0.0019608921377177175 54-55 0.0 1.278842698511555E-4 0.0 0.5516287980029593 0.0021740325874696435 56-57 0.0 1.278842698511555E-4 0.0 0.6630159970433156 0.0021740325874696435 58-59 0.0 1.278842698511555E-4 0.0 0.7893869697012326 0.002195346632444836 60-61 0.0 1.278842698511555E-4 0.0 0.921811131132104 0.0022592887673704137 62-63 0.0 1.491983148263481E-4 0.0 1.0680254796619253 0.0025150573070727247 64-65 0.0 1.7051235980154066E-4 0.0 1.2308434692274213 0.0025150573070727247 66-67 0.0 1.7051235980154066E-4 0.0 1.4202613869219578 0.0025789994419983028 68-69 0.0 1.7051235980154066E-4 0.0 1.6284143501496886 0.0026429415769238804 70-71 0.0 1.7051235980154066E-4 0.0 1.8575829617229593 0.0026855696668742655 72-73 0.0 1.7051235980154066E-4 0.0 2.0957887283657115 0.0029413382065765765 74-75 0.0 1.7051235980154066E-4 0.0 2.346186128734274 0.0030265943864773467 76-77 0.0 1.7051235980154066E-4 0.0 2.638785338153718 0.0030265943864773467 78-79 0.0 1.9182640477673327E-4 0.0 2.9676823661659144 0.0030479084314525393 80-81 0.0 2.55768539702311E-4 0.0 3.316273571735189 0.003069222476427732 82-83 0.0 2.55768539702311E-4 0.0 3.680743740810982 0.0031971067462788876 84-85 0.0 2.55768539702311E-4 0.0 4.065760649242861 0.0032397348362292726 86-87 0.0 2.55768539702311E-4 0.0 4.489249408854962 0.0032823629261796577 88-89 0.0 2.55768539702311E-4 0.0 4.955685969092077 0.003324991016130043 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1935 0.0 50.771294 1 GTATCAA 3430 0.0 42.478886 1 TCAACGC 4015 0.0 35.587147 4 CAACGCA 4105 0.0 34.92181 5 ATCAACG 4165 0.0 34.300373 3 AACGCAG 4380 0.0 32.72225 6 TATCAAC 4450 0.0 32.42358 2 GTACATG 7040 0.0 27.23564 1 ACGCAGA 5235 0.0 27.018188 7 TACATGG 7235 0.0 26.174702 2 ACATGGG 7255 0.0 25.448345 3 CGCAGAG 5510 0.0 25.242258 8 CATGGGG 5790 0.0 22.545835 4 GCAGAGT 6740 0.0 19.86059 9 GTGTAGC 1260 0.0 19.586718 1 GTATAGG 620 0.0 19.137146 1 ATGGGGG 3840 0.0 18.66589 5 CAGAGTA 6015 0.0 17.953676 10-11 GAGTACA 5395 0.0 17.858025 1 AGAGTAC 5590 0.0 17.365572 10-11 >>END_MODULE