##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921352_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2345871 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.12050918400884 31.0 31.0 34.0 26.0 34.0 2 30.29150110982232 31.0 31.0 34.0 26.0 34.0 3 30.350902926887283 33.0 31.0 34.0 26.0 34.0 4 33.83748125962595 37.0 35.0 37.0 30.0 37.0 5 33.485429931995405 37.0 35.0 37.0 28.0 37.0 6 33.41808778061539 37.0 35.0 37.0 28.0 37.0 7 33.23708592671976 37.0 35.0 37.0 26.0 37.0 8 33.17857247904936 37.0 35.0 37.0 26.0 37.0 9 34.66341158571805 39.0 35.0 39.0 27.0 39.0 10-11 34.465386417241184 39.0 35.0 39.0 26.0 39.0 12-13 34.36317129117501 39.0 35.0 39.0 25.0 39.0 14-15 35.44308169545555 40.0 36.0 41.0 25.0 41.0 16-17 35.39317144889894 40.0 36.0 41.0 25.0 41.0 18-19 35.336783011512566 40.0 36.0 41.0 25.0 41.0 20-21 35.28818677582868 40.0 36.0 41.0 24.0 41.0 22-23 35.160325951427 40.0 36.0 41.0 23.0 41.0 24-25 35.07450026024449 40.0 36.0 41.0 23.0 41.0 26-27 34.91060207487965 39.5 35.0 41.0 21.5 41.0 28-29 34.738842630306614 39.0 35.0 41.0 19.0 41.0 30-31 34.5789129069757 39.0 35.0 41.0 18.0 41.0 32-33 34.518532135825026 39.0 35.0 41.0 18.0 41.0 34-35 34.6436511214811 39.0 35.0 41.0 18.0 41.0 36-37 34.60882226686804 39.0 35.0 41.0 17.0 41.0 38-39 34.51124486384801 39.0 35.0 41.0 16.0 41.0 40-41 34.37669420014997 39.0 35.0 41.0 15.0 41.0 42-43 34.25392828505915 39.0 35.0 41.0 14.0 41.0 44-45 34.10277461974678 39.0 34.0 41.0 9.0 41.0 46-47 33.93450598945978 39.0 34.0 41.0 8.5 41.0 48-49 33.77074719794908 39.0 34.0 41.0 7.0 41.0 50-51 33.613863038504675 39.0 34.0 40.5 2.0 41.0 52-53 33.436790641940675 38.5 33.5 40.0 2.0 41.0 54-55 33.224885980516405 38.0 33.0 40.0 2.0 41.0 56-57 32.969511324365236 38.0 33.0 40.0 2.0 41.0 58-59 32.74715873123458 38.0 33.0 40.0 2.0 41.0 60-61 32.487992306482326 37.0 32.5 40.0 2.0 41.0 62-63 32.20227604160672 37.0 32.0 40.0 2.0 41.0 64-65 31.90172882481603 36.0 32.0 39.5 2.0 41.0 66-67 31.588147003820758 36.0 32.0 39.0 2.0 41.0 68-69 31.244310109123646 35.0 31.0 39.0 2.0 40.0 70-71 30.88684565349075 35.0 31.0 38.0 2.0 40.0 72-73 30.51178048579824 35.0 31.0 37.0 2.0 39.5 74-75 30.112181147215683 35.0 30.5 37.0 2.0 39.0 76-77 27.522052150352685 32.0 27.0 34.5 2.0 36.5 78-79 29.086423123863163 34.0 29.5 35.5 2.0 37.0 80-81 29.294993629231957 34.0 30.0 35.5 2.0 37.0 82-83 29.132101466789948 34.0 30.0 35.0 2.0 37.0 84-85 28.895702918020643 34.0 30.0 35.0 2.0 36.0 86-87 28.632217628335063 34.0 29.5 35.0 2.0 36.0 88-89 28.34108674347396 34.0 29.0 35.0 2.0 36.0 90-91 28.13166751283425 34.0 29.0 35.0 2.0 35.0 92-93 27.96227520609616 34.0 29.0 35.0 2.0 35.0 94-95 27.8322874531464 34.0 29.0 35.0 2.0 35.0 96-97 27.61185909199611 34.0 29.0 35.0 2.0 35.0 98-99 27.303100852519172 34.0 28.5 35.0 2.0 35.0 100-101 26.200903630250767 32.5 25.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 108954.0 3 27988.0 4 13815.0 5 9143.0 6 7535.0 7 7401.0 8 7519.0 9 7915.0 10 8622.0 11 8824.0 12 9359.0 13 10188.0 14 10800.0 15 11342.0 16 12278.0 17 12978.0 18 11907.0 19 10066.0 20 9789.0 21 9502.0 22 10280.0 23 11677.0 24 13759.0 25 16632.0 26 19975.0 27 23695.0 28 28366.0 29 33994.0 30 41119.0 31 50808.0 32 64515.0 33 84795.0 34 121831.0 35 181756.0 36 310252.0 37 529630.0 38 444819.0 39 42043.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.662215675363825 23.095327909985627 14.810612396776031 27.431844017874518 2 13.347011295615353 23.429343364028465 35.49179705916706 27.73184828118912 3 15.78101500233612 26.88970094229267 29.05474880721367 28.274535248157534 4 12.503996541872247 19.114767041041393 34.03945300876724 34.34178340831912 5 13.570481416578195 38.21567599142139 34.365707756132295 13.848134835868114 6 33.27299970799435 36.93837401874378 16.388806592080893 13.399819681180983 7 28.303998090260755 32.26431984722086 21.08829560035296 18.343386462165423 8 26.58638862636822 36.42599027131778 19.077544272921465 17.91007682939254 9 26.405203014146984 15.422885572139302 19.19977696983338 38.972134443880336 10-11 25.63962173843677 26.12093773648813 27.485946153012677 20.753494372062427 12-13 25.98143884542474 23.221691596326647 27.63134056619578 23.16552899205283 14-15 23.223101671208852 24.75938778755275 24.771537228230866 27.245973313007532 16-17 23.53987446440412 27.98468882633447 25.451852906503497 23.023583802757912 18-19 23.458398154879855 27.30329364858612 26.901863642108758 22.33644455442527 20-21 23.98748515732753 26.273645701385146 26.959600435576885 22.779268705710436 22-23 23.800715002324303 26.13081349684647 26.596419702485203 23.472051798344022 24-25 23.567011482664743 26.37530130458571 26.62753499225544 23.430152220494104 26-27 23.39662061436322 26.666768976699316 26.58713766795364 23.34947274098382 28-29 23.473932027918664 26.85661363086528 26.483021900315144 23.18643244090091 30-31 23.89686587507413 26.508558485005974 26.445077032546926 23.149498607372973 32-33 23.66644696228133 26.561322250909797 26.28648570756181 23.48574507924706 34-35 23.8500715251472 26.69285240922829 26.443777354825055 23.013298710799454 36-37 23.875155220458876 26.527746576197952 26.511462548654922 23.085635654688243 38-39 23.822715212817112 26.623303823239542 26.396329881016122 23.157651082927227 40-41 23.91906541601887 26.434656238822974 26.37467595941803 23.271602385740124 42-43 23.75280649313748 26.47485704017583 26.244219951046105 23.528116515640583 44-45 23.755661172271655 26.49028954550115 26.242558970300255 23.51149031192694 46-47 23.85822865972521 26.56680015407148 26.07855897550566 23.496412210697653 48-49 23.61119874489474 26.659262796190347 26.23131624048226 23.498222218432655 50-51 23.75373307235132 26.600129467883587 26.21449677939581 23.431640680369288 52-53 24.00010486677763 26.41952210163253 26.179287660441375 23.401085371148465 54-55 23.514741326612825 26.43235683039098 26.48920180028254 23.563700042713656 56-57 23.69789318666787 26.447486972697178 26.155852731742325 23.698767108892625 58-59 23.6494992682252 26.488563807224132 26.354636016109705 23.507300908440968 60-61 23.79911062757839 26.616245306836046 26.34845732551363 23.236186740071936 62-63 23.771469964007462 26.459249810060687 26.378861353254717 23.390418872677134 64-65 23.517526206639676 26.26399185215334 26.44353187917496 23.774950062032026 66-67 23.565148052125267 26.537426656205227 26.24678054854336 23.65064474312615 68-69 23.577181867661793 26.433147294708164 26.283123939502023 23.70654689812802 70-71 23.541512615362574 26.28492646902044 26.324734605317364 23.848826310299625 72-73 23.438453691435416 26.55430851341657 26.16943689100989 23.83780090413812 74-75 23.401384531552328 26.547770005397936 26.113206517429017 23.937638945620723 76-77 23.394373548347968 26.200124887989485 26.366464243338523 24.039037320324024 78-79 23.29562223734874 26.289031112293937 26.39638106546428 24.018965584893042 80-81 23.53499121543831 26.45857949617836 26.098816563126338 23.907612725256996 82-83 23.545716351133876 26.391128770079785 26.228684828695187 23.834470050091145 84-85 23.404360560934727 26.494409542729976 26.12387997903765 23.977349917297648 86-87 23.30621375607567 26.588312531514134 26.110406768063626 23.995066944346565 88-89 23.229828738034648 26.40627590249638 26.14220929815237 24.221686061316603 90-91 23.191870290196256 26.327475663809963 26.273724138623795 24.206929907369986 92-93 23.37703680644102 26.213192492867716 26.271572770653783 24.13819793003748 94-95 23.25601718831263 26.27106975078652 26.244383531277443 24.228529529623408 96-97 23.02519012977147 26.208354391364114 26.34594655200014 24.42050892686428 98-99 22.88755457235501 26.12759066156518 26.215319925135987 24.76953484094382 100-101 22.846610546104436 26.180956308874105 26.27853319223264 24.69389995278882 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 25.0 2 35.5 3 46.5 4 39.5 5 44.5 6 81.0 7 210.0 8 321.0 9 323.5 10 286.0 11 258.5 12 261.5 13 273.0 14 316.5 15 375.0 16 419.0 17 463.5 18 566.0 19 647.5 20 702.0 21 854.5 22 1032.0 23 1273.0 24 1692.5 25 2311.5 26 3316.0 27 4963.5 28 7340.0 29 10709.0 30 15115.0 31 20501.0 32 27089.0 33 32581.0 34 37418.0 35 43133.0 36 49901.5 37 56734.5 38 62309.5 39 67047.0 40 70670.0 41 74338.0 42 78007.5 43 81953.5 44 85990.0 45 89748.0 46 92918.0 47 95488.5 48 98016.5 49 99153.5 50 98152.0 51 96222.0 52 94552.0 53 92179.0 54 88713.5 55 83756.5 56 77410.5 57 69704.5 58 61817.5 59 53638.5 60 44807.0 61 37381.5 62 30957.0 63 23873.0 64 17416.0 65 13239.5 66 10225.0 67 7987.0 68 6259.5 69 4866.5 70 3811.0 71 2935.5 72 2210.5 73 1681.5 74 1324.5 75 1080.5 76 835.5 77 557.5 78 349.5 79 217.0 80 142.0 81 97.5 82 56.0 83 36.5 84 21.0 85 12.5 86 7.5 87 6.5 88 7.0 89 4.5 90 1.5 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10328786194978325 2 2.1314044975192584E-4 3 0.004390693264889672 4 0.00396441236538582 5 0.021356673065142967 6 0.0011083303387100143 7 4.2628089950385166E-5 8 0.001023074158809244 9 0.0 10-11 0.07131679448699438 12-13 1.7051235980154066E-4 14-15 0.0035807595558323543 16-17 1.0657022487596292E-4 18-19 3.197106746278887E-4 20-21 7.033634841813553E-4 22-23 1.9182640477673324E-4 24-25 0.0013001567434867477 26-27 0.0025576853970231098 28-29 0.005477709558624494 30-31 0.012958939344917092 32-33 0.012575286535363625 34-35 0.008205907315449144 36-37 5.967932593053923E-4 38-39 2.983966296526962E-4 40-41 0.004262808995038517 42-43 0.008291163495349915 44-45 0.007566485966193366 46-47 0.008802700574754537 48-49 0.010699650577546677 50-51 0.004923544389269487 52-53 0.0015985533731394438 54-55 7.246775291565479E-4 56-57 0.005307197198822953 58-59 0.008696130349878574 60-61 0.007332031471466249 62-63 0.01641181463089829 64-65 0.030329885999699047 66-67 0.03201369555273926 68-69 0.024276697226744352 70-71 0.037214322526686244 72-73 0.02316836688803434 74-75 0.022550259583753753 76-77 0.19493825534311135 78-79 0.05128159221031336 80-81 0.0482763118688112 82-83 0.019033442162846977 84-85 0.030436456224575005 86-87 0.071828331566399 88-89 0.22861444640391565 90-91 0.27292634590734105 92-93 0.038407909045297034 94-95 0.00387915618548505 96-97 0.0072680893365406705 98-99 7.459915741317404E-4 100-101 0.0012149005635859772 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2345871.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.4854030689188 #Duplication Level Percentage of deduplicated Percentage of total 1 82.40763683001046 55.613125874303336 2 10.371492529235965 13.998487075235385 3 3.130220570689034 6.337325907227115 4 1.3387838215374355 3.6139346327440514 5 0.7466007837011849 2.5192327409822566 6 0.46270871954055687 1.8735650665018675 7 0.30822014302927964 1.456025241040352 8 0.21257229628055957 1.1476421676623354 9 0.17122982370529077 1.0399962303154313 >10 0.8082036114197182 9.347921144231805 >50 0.031498038962204794 1.4220570173013487 >100 0.010069793751670036 1.2233698670028064 >500 6.358651139388092E-4 0.3111091979590838 >1k 1.2717302278746786E-4 0.09620783749283977 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.2628089950385166E-5 2 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 3 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 4 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 5 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 6 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 7 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 4.2628089950385166E-5 8 0.0 4.2628089950385166E-5 0.0 4.2628089950385166E-5 8.525617990077033E-5 9 0.0 4.2628089950385166E-5 0.0 8.525617990077033E-5 8.525617990077033E-5 10-11 0.0 4.2628089950385166E-5 0.0 8.525617990077033E-5 8.525617990077033E-5 12-13 0.0 4.2628089950385166E-5 0.0 8.525617990077033E-5 1.278842698511555E-4 14-15 0.0 4.2628089950385166E-5 0.0 8.525617990077033E-5 2.1314044975192584E-4 16-17 0.0 4.2628089950385166E-5 0.0 1.0657022487596292E-4 2.55768539702311E-4 18-19 2.1314044975192583E-5 4.2628089950385166E-5 0.0 1.491983148263481E-4 2.55768539702311E-4 20-21 4.2628089950385166E-5 4.2628089950385166E-5 0.0 1.7051235980154066E-4 3.410247196030813E-4 22-23 4.2628089950385166E-5 4.2628089950385166E-5 0.0 2.1314044975192584E-4 4.262808995038517E-4 24-25 4.2628089950385166E-5 4.2628089950385166E-5 0.0 2.3445449472711842E-4 5.11537079404622E-4 26-27 4.2628089950385166E-5 4.2628089950385166E-5 0.0 3.197106746278888E-4 5.11537079404622E-4 28-29 4.2628089950385166E-5 4.2628089950385166E-5 0.0 7.459915741317404E-4 5.11537079404622E-4 30-31 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.0033463050611052354 5.11537079404622E-4 32-33 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.010124171363216477 5.11537079404622E-4 34-35 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.019161326432698134 5.541651693550071E-4 36-37 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.03465663712966314 5.541651693550071E-4 38-39 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.06170416020318252 5.754792143301997E-4 40-41 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.09437859115015276 5.967932593053923E-4 42-43 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.1299091041237988 5.967932593053923E-4 44-45 4.2628089950385166E-5 4.2628089950385166E-5 0.0 0.17228142553448167 6.181073042805849E-4 46-47 6.394213492557776E-5 4.2628089950385166E-5 0.0 0.22693063685087544 6.820494392061627E-4 48-49 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.2882511442445045 7.67305619106933E-4 50-51 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.35161779995575204 7.67305619106933E-4 52-53 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.4226148837681185 8.738758439828959E-4 54-55 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.5089580799626237 0.001023074158809244 56-57 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.6122459419124069 0.0010870162937348217 58-59 8.525617990077033E-5 4.2628089950385166E-5 0.0 0.7286206274769584 0.001172272473635592 60-61 1.278842698511555E-4 4.2628089950385166E-5 0.0 0.8505582787800352 0.0011935865186107847 62-63 1.278842698511555E-4 4.2628089950385166E-5 0.0 0.9863713733619623 0.0012362146085611698 64-65 1.278842698511555E-4 4.2628089950385166E-5 0.0 1.136955101111698 0.0012362146085611698 66-67 1.278842698511555E-4 4.2628089950385166E-5 0.0 1.313371451371367 0.0012575286535363623 68-69 1.278842698511555E-4 4.2628089950385166E-5 0.0 1.508053938174776 0.0012788426985115549 70-71 1.278842698511555E-4 4.2628089950385166E-5 0.0 1.7220469497257096 0.0014067269683627104 72-73 1.278842698511555E-4 4.2628089950385166E-5 0.0 1.9471445787087185 0.0015559252831890587 74-75 1.278842698511555E-4 4.2628089950385166E-5 0.0 2.1844338414175377 0.0016198674181146363 76-77 1.278842698511555E-4 4.2628089950385166E-5 0.0 2.460173641261604 0.0016624955080650214 78-79 1.278842698511555E-4 4.2628089950385166E-5 0.0 2.773170391722307 0.0016624955080650214 80-81 1.278842698511555E-4 4.2628089950385166E-5 0.0 3.104497220861676 0.0016624955080650214 82-83 1.278842698511555E-4 4.2628089950385166E-5 0.0 3.450061832044473 0.0018116938228913697 84-85 1.278842698511555E-4 4.2628089950385166E-5 0.0 3.8157255876388767 0.0018543219128417548 86-87 1.278842698511555E-4 4.2628089950385166E-5 0.0 4.2191152028393715 0.00189695000279214 88-89 1.278842698511555E-4 4.2628089950385166E-5 0.0 4.662340768098502 0.0019182640477673324 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1885 0.0 56.725693 1 GTATCAA 3590 0.0 42.625557 1 TCAACGC 5115 0.0 29.507622 4 ATCAACG 5210 0.0 28.969578 3 CAACGCA 5325 0.0 28.470709 5 TATCAAC 5360 0.0 28.42451 2 AACGCAG 5630 0.0 26.926035 6 GTACATG 6705 0.0 22.042978 1 ACGCAGA 6915 0.0 21.578814 7 TACATGG 6870 0.0 21.209694 2 CGCAGAG 7035 0.0 21.008081 8 TAACGCT 220 1.3561294E-6 19.416573 4 ACATGGG 7400 0.0 19.369926 3 AGAGTAC 7070 0.0 18.55153 10-11 GCAGAGT 7945 0.0 18.24299 9 GTACCGT 290 5.192851E-8 18.025396 6 CATGGGG 5980 0.0 17.540575 4 CAGAGTA 7455 0.0 17.019772 9 TAAGGTG 1010 0.0 16.46925 5 TACACTG 3270 0.0 16.423203 5 >>END_MODULE