##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921347_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2296124 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.15246781097188 33.0 30.0 34.0 16.0 34.0 2 29.934348057857502 33.0 31.0 34.0 26.0 34.0 3 30.16791253434048 33.0 31.0 34.0 26.0 34.0 4 32.320357262935275 37.0 35.0 37.0 19.0 37.0 5 31.97226020894342 37.0 33.0 37.0 19.0 37.0 6 32.110286291158495 37.0 35.0 37.0 17.0 37.0 7 32.323597506058036 37.0 35.0 37.0 17.0 37.0 8 32.57983758716864 37.0 35.0 37.0 17.0 37.0 9 34.33871472098197 39.0 37.0 39.0 17.0 39.0 10-11 34.519370687297375 39.0 37.0 39.0 21.0 39.0 12-13 34.54617585984032 39.0 37.0 39.0 24.0 39.0 14-15 35.935624992378465 40.5 38.0 41.0 25.0 41.0 16-17 35.9551328673887 41.0 38.0 41.0 25.0 41.0 18-19 35.98279578977442 41.0 38.0 41.0 25.0 41.0 20-21 35.9716254435736 41.0 38.0 41.0 25.0 41.0 22-23 35.92041653673756 41.0 38.0 41.0 24.5 41.0 24-25 35.85780406458885 41.0 38.0 41.0 24.0 41.0 26-27 35.76977049148914 40.0 38.0 41.0 23.5 41.0 28-29 35.69742400671741 40.0 37.0 41.0 23.0 41.0 30-31 35.60203804324156 40.0 37.0 41.0 22.0 41.0 32-33 35.482341110497515 40.0 37.0 41.0 20.5 41.0 34-35 35.39810611273607 40.0 37.0 41.0 19.0 41.0 36-37 35.31597770852097 40.0 36.0 41.0 18.0 41.0 38-39 35.2169619323695 40.0 36.0 41.0 16.5 41.0 40-41 35.089520862113716 40.0 36.0 41.0 15.0 41.0 42-43 34.94852869444333 40.0 35.0 41.0 12.5 41.0 44-45 34.80272559321709 40.0 35.0 41.0 9.0 41.0 46-47 34.598042614423264 40.0 35.0 41.0 7.0 41.0 48-49 34.396205083000744 40.0 35.0 41.0 2.0 41.0 50-51 34.21326940531087 40.0 35.0 41.0 2.0 41.0 52-53 34.02691296288876 39.0 35.0 41.0 2.0 41.0 54-55 33.816112936409354 39.0 35.0 41.0 2.0 41.0 56-57 33.56521990972613 38.5 34.5 41.0 2.0 41.0 58-59 33.48825194109726 38.5 35.0 41.0 2.0 41.0 60-61 33.24140399211889 37.5 34.0 41.0 2.0 41.0 62-63 32.94995414010742 37.0 34.0 40.0 2.0 41.0 64-65 32.646633195768175 36.5 34.0 40.0 2.0 41.0 66-67 32.328463314699036 36.0 34.0 39.0 2.0 41.0 68-69 31.994447599519887 35.5 34.0 39.0 2.0 41.0 70-71 31.668099806456446 35.0 33.0 38.0 2.0 40.5 72-73 31.333269457572847 35.0 33.0 37.0 2.0 39.5 74-75 31.00843007607603 35.0 33.0 37.0 2.0 39.0 76-77 30.72040730378673 35.0 33.0 36.0 2.0 39.0 78-79 30.47669703378389 35.0 33.0 36.0 2.0 37.0 80-81 30.255227287376467 35.0 33.0 35.0 2.0 37.0 82-83 30.066365100491087 35.0 32.0 35.0 2.0 36.5 84-85 29.902384191794518 35.0 32.0 35.0 2.0 36.0 86-87 29.770096040109333 35.0 32.0 35.0 2.0 36.0 88-89 29.652235245134847 35.0 32.0 35.0 2.0 36.0 90-91 29.55764867228425 35.0 32.0 35.0 2.0 35.0 92-93 29.49367564643721 35.0 32.0 35.0 2.0 35.0 94-95 29.42519132241987 35.0 32.0 35.0 2.0 35.0 96-97 29.361845004886497 35.0 32.0 35.0 2.0 35.0 98-99 29.307407831632787 35.0 32.0 35.0 2.0 35.0 100-101 29.256759870111544 35.0 31.5 35.0 2.0 35.0 102-103 28.58139673641319 34.0 30.0 35.0 2.0 35.0 104-105 29.127736785992397 35.0 31.0 35.0 2.0 35.0 106-107 29.189989303713563 35.0 31.0 35.0 2.0 35.0 108-109 29.259962441052835 35.0 31.5 35.0 2.0 35.0 110-111 29.36929843510194 35.0 32.0 35.0 2.0 35.0 112-113 29.333818208424283 35.0 32.0 35.0 2.0 35.0 114-115 29.273351961827842 35.0 32.0 35.0 2.0 35.0 116-117 29.210438983260488 35.0 32.0 35.0 2.0 35.0 118-119 29.129032665483223 35.0 32.0 35.0 2.0 35.0 120-121 29.032516536563357 35.0 32.0 35.0 2.0 35.0 122-123 28.91796610287598 35.0 32.0 35.0 2.0 35.0 124-125 28.39180092190143 34.5 30.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 160188.0 3 9465.0 4 7183.0 5 6658.0 6 6893.0 7 7258.0 8 7454.0 9 7734.0 10 8109.0 11 8304.0 12 8748.0 13 10115.0 14 11411.0 15 9800.0 16 6806.0 17 6109.0 18 5501.0 19 5055.0 20 5029.0 21 5258.0 22 5981.0 23 7258.0 24 9537.0 25 11995.0 26 14659.0 27 17402.0 28 20249.0 29 24763.0 30 29883.0 31 37176.0 32 47656.0 33 64626.0 34 97898.0 35 169498.0 36 385390.0 37 790074.0 38 258707.0 39 294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.817516334156416 17.708760352249634 11.807792321307607 27.66593099228635 2 15.571066719393203 19.684781832340065 38.045506253146606 26.698645195120125 3 18.524565746449234 23.82528121303553 28.371333603934286 29.27881943658095 4 13.55454002537809 16.439174258095964 31.435770039478484 38.57051567704746 5 14.708760589324225 37.551771362654115 32.018687209566636 15.720780838455022 6 33.69749308840093 34.06345381701092 16.690057536747485 15.548995557840662 7 29.892066916159642 31.445524438390322 19.291693765739424 19.37071487971061 8 27.895339285356506 34.470498459437074 18.291974350955652 19.342187904250768 9 28.096268688895094 15.604571355896843 18.154018229499 38.14514172570907 10-11 26.785417582635347 25.404011599838245 25.553920149960813 22.256650667565594 12-13 26.7711378409005 22.677379595570013 26.180883840601133 24.370598722928356 14-15 24.238085573775635 23.49738080347577 23.713636545761467 28.55089707698713 16-17 24.359442260087 26.35639451527879 24.282638916713555 25.001524307920654 18-19 24.55161393722639 25.692972156556003 25.75640514188258 23.999008764335027 20-21 25.337917290181196 24.77840917999202 25.609679616606073 24.273993913220714 22-23 25.29536732336755 24.25367706622116 25.394577993174583 25.0563776172367 24-25 24.78017302201449 24.705155296490954 25.298851455757614 25.21582022573694 26-27 24.39084300325244 24.87515918129857 25.667864627520114 25.066133187928873 28-29 24.55076467995631 25.21364264299315 25.36023751330503 24.875355163745514 30-31 25.109902601079035 25.01145408523233 25.203756417336347 24.674886896352287 32-33 24.79815985547819 25.1418912915853 25.246611245734112 24.8133376072024 34-35 24.84441171295627 25.20157883459256 25.530676914661406 24.423332537789772 36-37 24.973019749804454 25.02438892673044 25.568370871956393 24.43422045150872 38-39 24.84428105799164 25.329620699927357 25.38893805386817 24.437160188212832 40-41 24.87485431971444 25.265665094742268 25.254058578717874 24.605422006825414 42-43 24.611519238508027 25.295236668402925 25.118591156226756 24.974652936862295 44-45 24.576612587125084 25.28103882891342 25.38551924896042 24.756829335001072 46-47 24.554074605726868 25.24972518905773 25.09553055497003 25.100669650245372 48-49 24.584234126728347 25.436126271926078 25.047667286261543 24.93197231508403 50-51 24.51627176929469 25.586510136212155 25.141303344244477 24.75591475024868 52-53 24.67693382413145 25.371473840262983 25.111383357344813 24.840208978260755 54-55 24.228547761357834 25.126234471657455 25.424650410866313 25.220567356118394 56-57 24.377124231966565 25.256584574700668 25.12536343855994 25.240927754772823 58-59 24.526332201570995 25.351135217435996 25.188600441439572 24.933932139553438 60-61 24.83158575059535 25.221699699145166 25.324263846377637 24.622450703881846 62-63 24.631879637162452 25.279449193510455 25.293603481345084 24.79506768798201 64-65 24.364842665291594 25.005204422757654 25.385954765509176 25.24399814644157 66-67 24.408307216857626 25.31021843768019 25.201949023658997 25.079525321803175 68-69 24.248058902742187 25.19439281153805 25.32483001789102 25.23271826782874 70-71 24.28242115843918 25.003462356562622 25.432032416367754 25.28208406863044 72-73 24.341760288207432 25.423496292012103 25.05306769146614 25.181675728314325 74-75 24.145102790615837 25.49788251853994 25.16782630206383 25.189188388780398 76-77 24.187021258433777 25.001154118854206 25.154739029773655 25.657085592938362 78-79 24.0907721011583 25.149621710325746 25.301551658359916 25.458054530156037 80-81 24.416799789558404 25.319102975274856 24.963394834076905 25.300702401089836 82-83 24.37387963367832 25.294343859477976 25.124862594528867 25.20691391231484 84-85 24.229484121937666 25.378681639144922 24.92785668369827 25.46397755521914 86-87 23.869638573526515 25.61466628108935 25.101801993272137 25.413893152111992 88-89 23.920441578939116 25.291251691981792 25.13969193301407 25.648614796065022 90-91 24.126579786657214 25.060722079928855 25.2521321866438 25.560565946770136 92-93 24.24079830583214 25.177969285041563 25.13668210943497 25.444550299691326 94-95 24.175419288569877 25.12199376208968 25.078158973730268 25.624427975610175 96-97 23.89008644389748 24.98025467817684 25.24487574329405 25.88478313463163 98-99 23.72686480645854 25.0625728673943 25.149218922505455 26.0613434036417 100-101 23.707365107459353 25.251336600288138 25.30377279275858 25.73752549949393 102-103 23.665517120485895 25.02661551088171 25.2604008451636 26.047466523468792 104-105 23.6002113997788 25.160711085444664 25.15269757920251 26.086379935574023 106-107 23.75563994913158 24.939463094263367 25.25625838370817 26.048638572896888 108-109 23.651203349663117 24.890864402708665 25.31738985672081 26.140542390907413 110-111 23.491886726878544 25.416377409832442 25.227188197101714 25.864547666187303 112-113 23.490603118538658 25.39865838163065 25.208728249875062 25.90201024995563 114-115 23.461157132053188 25.445181026311165 25.117170666209667 25.976491175425988 116-117 23.233113766183088 25.32062400361307 25.287459194545903 26.15880303565794 118-119 23.30776770255342 25.09700618413743 25.307513795576135 26.287712317733007 120-121 23.262367981122942 25.15704206290567 25.426605441656918 26.15398451431447 122-123 23.146329024393324 25.3294856143887 25.254335761095327 26.26984960012264 124-125 22.97344762746761 25.24926261556167 25.084027529019032 26.693262227951685 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 46.0 1 49.5 2 79.0 3 94.5 4 82.0 5 103.0 6 207.5 7 502.5 8 778.5 9 846.0 10 752.0 11 665.0 12 688.0 13 770.0 14 896.5 15 937.5 16 953.0 17 1068.5 18 1125.5 19 1196.5 20 1307.0 21 1328.0 22 1495.0 23 1722.0 24 1927.5 25 2262.0 26 2852.0 27 3701.5 28 4538.0 29 5758.5 30 7704.0 31 10061.5 32 13252.5 33 16513.5 34 19801.0 35 23812.0 36 28690.0 37 33845.5 38 38068.5 39 42470.0 40 47217.0 41 51869.5 42 56525.0 43 62254.0 44 68686.0 45 74732.5 46 80899.0 47 86969.0 48 93784.0 49 100037.0 50 104055.0 51 107245.5 52 107605.0 53 106770.0 54 107179.0 55 106222.0 56 100935.5 57 92001.5 58 83751.0 59 74902.5 60 64315.5 61 54290.5 62 45371.5 63 35385.5 64 25814.0 65 19548.0 66 14880.0 67 11333.0 68 8915.0 69 6672.0 70 5002.5 71 3929.0 72 2987.5 73 2367.5 74 1884.5 75 1407.5 76 1036.0 77 720.0 78 509.5 79 399.0 80 330.0 81 257.0 82 218.0 83 197.5 84 187.0 85 182.0 86 166.5 87 146.0 88 138.0 89 133.0 90 131.0 91 114.5 92 107.5 93 110.5 94 98.5 95 84.0 96 68.0 97 58.5 98 38.0 99 15.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3472808959794854 2 0.0 3 0.0 4 0.01929338310997141 5 0.17747299361881153 6 0.04655671906221093 7 0.023300135358543354 8 0.009145847523914214 9 0.007621539603261844 10-11 0.0025042201553574636 12-13 0.055071067590426306 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 3.048615841304738E-4 92-93 5.008440310714927E-4 94-95 1.0887913718945492E-4 96-97 4.5729237619571064E-4 98-99 4.355165487578197E-5 100-101 0.0 102-103 2.1775827437890985E-5 104-105 2.1775827437890985E-5 106-107 1.7420661950312788E-4 108-109 5.443956859472746E-4 110-111 4.3551654875781967E-4 112-113 7.186023054504024E-4 114-115 3.266374115683648E-4 116-117 6.750506505746206E-4 118-119 3.266374115683648E-4 120-121 1.524307920652369E-4 122-123 0.0019598244694101884 124-125 6.532748231367295E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2296124.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.367503667678314 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41891473608922 46.93851300809396 2 9.926526595447658 11.587731549341951 3 3.4936365722255163 6.117445363287237 4 1.7522120287902065 4.090889680678497 5 1.0216993857446 2.9817021322356303 6 0.6902656376407145 2.4173449282000026 7 0.45570937139421386 1.8619032884373012 8 0.36426725870740784 1.70090964468958 9 0.2683913943752726 1.409880212601482 >10 1.5146757220174278 15.876093754624202 >50 0.07356315372013085 2.8761033036947623 >100 0.019540339693943053 1.7098649361557843 >500 2.9890207684135455E-4 0.1058546247423296 >1k 2.9890207684068256E-4 0.3257635732175237 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.355165487578197E-5 4.355165487578197E-5 5 0.0 0.0 0.0 4.355165487578197E-5 4.355165487578197E-5 6 0.0 0.0 0.0 4.355165487578197E-5 4.355165487578197E-5 7 0.0 0.0 0.0 8.710330975156394E-5 4.355165487578197E-5 8 0.0 0.0 0.0 8.710330975156394E-5 1.3065496462734592E-4 9 0.0 0.0 0.0 8.710330975156394E-5 1.3065496462734592E-4 10-11 0.0 4.355165487578197E-5 0.0 8.710330975156394E-5 1.3065496462734592E-4 12-13 0.0 4.355165487578197E-5 0.0 1.0887913718945493E-4 1.5243079206523691E-4 14-15 0.0 4.355165487578197E-5 0.0 1.3065496462734592E-4 2.1775827437890986E-4 16-17 0.0 4.355165487578197E-5 0.0 1.3065496462734592E-4 3.9196489388203774E-4 18-19 0.0 4.355165487578197E-5 0.0 1.3065496462734592E-4 4.355165487578197E-4 20-21 0.0 4.355165487578197E-5 0.0 1.5243079206523691E-4 4.572923761957107E-4 22-23 0.0 4.355165487578197E-5 0.0 2.3953410181680085E-4 5.443956859472746E-4 24-25 0.0 4.355165487578197E-5 0.0 5.226198585093836E-4 6.097231682609476E-4 26-27 0.0 4.355165487578197E-5 0.0 9.145847523914215E-4 6.314989956988386E-4 28-29 0.0 4.355165487578197E-5 0.0 0.003222822460807866 6.532748231367296E-4 30-31 0.0 4.355165487578197E-5 0.0 0.012433997467035753 6.532748231367296E-4 32-33 0.0 6.532748231367295E-5 0.0 0.029767556107596974 6.532748231367296E-4 34-35 0.0 8.710330975156394E-5 0.0 0.05234908916068993 6.532748231367296E-4 36-37 0.0 8.710330975156394E-5 0.0 0.08499105449008851 6.532748231367296E-4 38-39 0.0 8.710330975156394E-5 0.0 0.14121624093472304 7.186023054504024E-4 40-41 0.0 8.710330975156394E-5 0.0 0.20902616757631556 7.839297877640755E-4 42-43 0.0 8.710330975156394E-5 0.0 0.2703904492962924 8.057056152019665E-4 44-45 0.0 8.710330975156394E-5 0.0 0.3364800855702915 8.274814426398574E-4 46-47 0.0 8.710330975156394E-5 0.0 0.4036367373887473 8.274814426398574E-4 48-49 0.0 8.710330975156394E-5 0.0 0.4802223224878099 9.145847523914214E-4 50-51 0.0 8.710330975156394E-5 0.0 0.5642116889157553 9.145847523914214E-4 52-53 0.0 8.710330975156394E-5 0.0 0.651576308596574 0.0010016880621429853 54-55 0.0 8.710330975156394E-5 0.0 0.7394635481359021 0.0011105671993324401 56-57 0.0 1.7420661950312788E-4 0.0 0.8341230700084141 0.0011323430267703312 58-59 0.0 1.7420661950312788E-4 0.0 0.9365347864488155 0.0011758946816461133 60-61 0.0 1.7420661950312788E-4 0.0 1.047504403072308 0.0011758946816461133 62-63 0.0 1.7420661950312788E-4 0.0 1.1686651069367335 0.001219446336521895 64-65 0.0 1.7420661950312788E-4 0.0 1.2869078499244815 0.001241222163959786 66-67 0.0 1.7420661950312788E-4 0.0 1.4189782433352902 0.0012629979913976771 68-69 0.0 1.7420661950312788E-4 0.0 1.5615881372260383 0.0012629979913976771 70-71 0.0 1.7420661950312788E-4 0.0 1.719462886150748 0.0013065496462734592 72-73 0.0 1.7420661950312788E-4 0.0 1.8774900658675229 0.001371877128587132 74-75 0.0 1.7420661950312788E-4 0.0 2.038914274664609 0.001393652956025023 76-77 0.0 1.7420661950312788E-4 0.0 2.2188914884387776 0.001393652956025023 78-79 0.0 2.1775827437890986E-4 0.0 2.420339668066707 0.001437204610900805 80-81 0.0 2.1775827437890986E-4 0.0 2.6279068552046843 0.0014807562657765871 82-83 0.0 2.1775827437890986E-4 0.0 2.8493887960754734 0.001524307920652369 84-85 0.0 2.1775827437890986E-4 0.0 3.0862880227722895 0.001524307920652369 86-87 0.0 2.613099292546918E-4 0.0 3.3298506526651 0.00154608374809026 88-89 0.0 3.048615841304738E-4 0.0 3.6044220608294673 0.001567859575528151 90-91 0.0 3.048615841304738E-4 0.0 3.8960221660502654 0.001567859575528151 92-93 0.0 3.048615841304738E-4 0.0 4.198379530025382 0.0016114112304039328 94-95 0.0 3.048615841304738E-4 0.0 4.5079229170550015 0.0016985145401554969 96-97 0.0 3.048615841304738E-4 0.0 4.83556201668551 0.0017202903675933878 98-99 0.0 3.048615841304738E-4 0.0 5.203029104699921 0.0017856178499070607 100-101 0.0 3.048615841304738E-4 0.0 5.601722729260267 0.0017856178499070607 102-103 0.0 3.048615841304738E-4 0.0 6.021364699815864 0.0018509453322207337 104-105 0.0 3.048615841304738E-4 0.0 6.455444043962782 0.0018727211596586248 106-107 0.0 3.048615841304738E-4 0.0 6.918115049535652 0.0018727211596586248 108-109 0.0 3.048615841304738E-4 0.0 7.409617250636289 0.0018727211596586248 110-111 0.0 3.048615841304738E-4 0.0 7.918322355412862 0.0018944969870965157 112-113 0.0 3.048615841304738E-4 2.1775827437890985E-5 8.4440779330733 0.0019162728145344066 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2270 0.0 66.09388 1 GTATCAA 4160 0.0 57.61883 1 GTACATG 11130 0.0 41.353184 1 TCAACGC 5865 0.0 39.628723 4 TACATGG 11905 0.0 38.49554 2 ACATGGG 12170 0.0 37.804214 3 CAACGCA 6145 0.0 37.532078 5 CATGGGG 11015 0.0 36.898895 4 TATCAAC 6475 0.0 36.53964 2 ATCAACG 6395 0.0 36.344402 3 AACGCAG 6455 0.0 35.62407 6 ATGGGGG 6955 0.0 34.3606 5 TGGGGGG 4900 0.0 28.57092 6 ACGCAGA 8030 0.0 28.330761 7 CGCAGAG 8560 0.0 26.434036 8 AGAGTAC 8580 0.0 23.595346 10-11 GCAGAGT 9645 0.0 23.460377 9 GTATACG 155 2.0425525E-4 23.138378 1 TAAGTAC 1695 0.0 22.92224 1 ATGGGGA 3930 0.0 21.988161 5 >>END_MODULE