##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921321_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1585263 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.690162452539422 31.0 31.0 34.0 27.0 34.0 2 30.70531829734246 33.0 31.0 34.0 27.0 34.0 3 30.88327804282318 33.0 31.0 34.0 27.0 34.0 4 34.361909033390674 37.0 35.0 37.0 32.0 37.0 5 34.36210773858975 37.0 35.0 37.0 31.0 37.0 6 34.44166866948891 37.0 35.0 37.0 32.0 37.0 7 34.32161855793014 37.0 35.0 37.0 31.0 37.0 8 34.3130477403434 37.0 35.0 37.0 31.0 37.0 9 35.9352978023205 39.0 37.0 39.0 31.0 39.0 10-11 35.98311857401579 39.0 37.0 39.0 31.5 39.0 12-13 35.941562693382735 39.0 37.0 39.0 31.0 39.0 14-15 37.27113387494693 41.0 38.0 41.0 31.0 41.0 16-17 37.252600987974866 41.0 38.0 41.0 31.0 41.0 18-19 37.230765494432156 40.5 38.0 41.0 31.0 41.0 20-21 37.2731291274697 41.0 38.0 41.0 31.0 41.0 22-23 37.210212753341246 40.0 38.0 41.0 31.0 41.0 24-25 37.1876798991713 40.5 38.0 41.0 31.0 41.0 26-27 37.16229862174289 40.0 38.0 41.0 31.0 41.0 28-29 37.10052937588274 40.0 38.0 41.0 30.0 41.0 30-31 37.035086607080345 40.0 38.0 41.0 30.0 41.0 32-33 36.964583163803105 40.0 38.0 41.0 30.0 41.0 34-35 36.853854849321536 40.0 38.0 41.0 30.0 41.0 36-37 36.745617919550256 40.0 38.0 41.0 30.0 41.0 38-39 36.64581271372637 40.0 37.0 41.0 30.0 41.0 40-41 36.54636170780495 40.0 37.0 41.0 30.0 41.0 42-43 36.35000753818136 40.0 37.0 41.0 29.0 41.0 44-45 36.08703603124529 40.0 36.0 41.0 28.5 41.0 46-47 35.86579608557066 40.0 36.0 41.0 28.0 41.0 48-49 35.660540238433626 40.0 35.0 41.0 27.0 41.0 50-51 35.48619976622176 39.0 35.0 41.0 27.0 41.0 52-53 35.28938889004537 39.0 35.0 41.0 26.5 41.0 54-55 35.07985078816575 39.0 35.0 40.5 26.0 41.0 56-57 34.83107850243146 38.5 35.0 40.0 26.0 41.0 58-59 34.5586520974753 38.0 34.0 40.0 26.0 41.0 60-61 34.26669013280446 37.5 34.0 40.0 25.0 41.0 62-63 33.94109400143699 37.0 34.0 40.0 24.5 41.0 64-65 33.59394119461565 36.5 34.0 39.5 23.5 41.0 66-67 33.254904706663815 36.0 33.0 39.0 23.0 41.0 68-69 32.89795573352813 35.5 33.0 39.0 22.0 40.0 70-71 32.859018976661915 35.0 33.0 38.5 23.0 40.0 72-73 32.56715321053983 35.0 33.0 37.0 22.5 39.5 74-75 32.24060644826758 35.0 33.0 37.0 22.0 39.0 76-77 31.94129144501575 35.0 33.0 36.5 21.5 39.0 78-79 31.642789871459815 35.0 33.0 36.0 20.5 37.5 80-81 31.364721185065193 35.0 33.0 35.5 20.0 37.0 82-83 31.1427201669376 35.0 32.5 35.0 19.5 37.0 84-85 30.920525805497256 35.0 32.0 35.0 18.5 36.0 86-87 30.746012491302704 35.0 32.0 35.0 18.0 36.0 88-89 30.59983800795199 35.0 32.0 35.0 17.0 36.0 90-91 30.469405076633972 35.0 32.0 35.0 15.5 35.0 92-93 30.354345619622737 35.0 32.0 35.0 11.5 35.0 94-95 30.226952247040398 35.0 32.0 35.0 9.0 35.0 96-97 30.128573618383825 35.0 31.5 35.0 7.0 35.0 98-99 30.037853971233794 35.0 31.0 35.0 7.0 35.0 100-101 29.936151288461282 35.0 31.0 35.0 3.5 35.0 102-103 29.060774458244467 33.5 29.5 34.5 2.0 35.0 104-105 29.66912114898285 34.0 31.0 35.0 2.0 35.0 106-107 29.75021684099105 34.0 31.0 35.0 2.0 35.0 108-109 29.676231956464008 34.0 31.0 35.0 2.0 35.0 110-111 29.581160034644093 34.0 31.0 35.0 2.0 35.0 112-113 29.476399184236307 34.0 31.0 35.0 2.0 35.0 114-115 29.33936608625824 34.0 31.0 35.0 2.0 35.0 116-117 29.203502510309015 34.0 31.0 35.0 2.0 35.0 118-119 29.202297662911455 34.0 30.5 35.0 2.0 35.0 120-121 29.363282937909986 35.0 31.0 35.0 2.0 35.0 122-123 29.215107209340026 35.0 31.0 35.0 2.0 35.0 124-125 28.613113723085696 34.5 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48168.0 3 7150.0 4 4520.0 5 3724.0 6 4078.0 7 4592.0 8 4964.0 9 5240.0 10 5640.0 11 5996.0 12 6018.0 13 5957.0 14 5959.0 15 5376.0 16 4825.0 17 4612.0 18 4458.0 19 4299.0 20 4222.0 21 4462.0 22 5095.0 23 6724.0 24 9245.0 25 11656.0 26 12863.0 27 14486.0 28 17760.0 29 21492.0 30 25950.0 31 32682.0 32 43022.0 33 58102.0 34 90176.0 35 148608.0 36 315507.0 37 503184.0 38 124405.0 39 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.73653094301221 17.214311896276417 11.768331652007905 25.280825508703465 2 16.481241163767677 18.870880131323524 38.94093280331185 25.70694590159694 3 20.46793144172244 22.7485388971323 28.169381945916484 28.614147715228782 4 13.661426959969111 14.062164842569064 34.398855323025515 37.877552874436304 5 14.475044712280027 37.76675172777082 32.85190220391323 14.906301356035922 6 35.505075488746094 33.36976109111651 16.359428395479256 14.765735024658142 7 31.177898597811865 31.266536874153832 19.00764244896517 18.547922079069128 8 28.012266718482472 35.68136309209123 18.217061110262936 18.08930907916336 9 27.896883074935403 15.818167595284239 17.794318778262273 38.49063055151809 10-11 27.104961013399276 25.233698806429633 26.088659819828912 21.572680360342172 12-13 26.479332868189864 22.29846691908901 26.751605817405533 24.470594395315594 14-15 23.937090976533863 23.87835940190944 23.659141118536844 28.52540850301985 16-17 24.53666700521512 27.10953009685219 24.35192679278753 24.001876105145158 18-19 24.57830512045789 26.592555232669085 25.58380575587449 23.24533389099853 20-21 25.167472143700216 25.455892010353338 25.54187544829039 23.83476039765605 22-23 25.1093483321994 25.051594875429483 25.45309337418657 24.38596341818455 24-25 24.6224874288645 25.287175770054994 25.463843515464184 24.626493285616323 26-27 24.388316000538733 25.524013314462874 25.566247906012734 24.52142277898566 28-29 24.491855173362236 26.01398707274514 25.37945265452839 24.114705099364237 30-31 25.025273035524187 25.555304971809328 25.336340338288053 24.083081654378425 32-33 24.596176156461276 25.582354830020204 25.41111017885272 24.410358834665796 34-35 24.556384355861503 25.779134671918726 25.582245532931776 24.082235439287995 36-37 24.659050011465673 25.712220135865856 25.496375301900464 24.132354550768014 38-39 24.67467866879347 25.83175174043561 25.474123016332385 24.019446574438536 40-41 24.623957874323846 25.60265941356764 25.519544853947057 24.253837858161457 42-43 24.42682695261761 25.675906702574558 25.35811684194788 24.53914950285995 44-45 24.181024516982916 25.699950131421527 25.703861392478327 24.41516395911723 46-47 24.25437997451961 25.491746630661442 25.605995178345392 24.647878216473558 48-49 24.1776488029524 25.828912090338452 25.567674983440053 24.425764123269094 50-51 24.211131592460678 25.77902726626974 25.61462973967658 24.395211401593002 52-53 24.347135179362176 25.772677221260714 25.520940280528503 24.359247318848603 54-55 24.12450711386762 25.411933104063678 25.831980436272634 24.631579345796073 56-57 24.18741795007832 25.653765574896713 25.553460432775683 24.605356042249284 58-59 24.259114046946593 25.773374725501412 25.624399509703416 24.343111717848576 60-61 24.661333545295573 25.60510172925861 25.65241472935702 24.08114999608879 62-63 24.454676698312845 25.72904020260115 25.644349692007268 24.17193340707874 64-65 24.282902580730628 25.433286441544023 25.679468335425593 24.60434264229976 66-67 24.276168000560176 25.70683108662643 25.46541181635986 24.551589096453526 68-69 24.116619337492498 25.619986947809213 25.640142457502314 24.623251257195975 70-71 24.035835372779413 25.471212189552883 25.831704457531522 24.661247980136178 72-73 24.1433094519994 25.82675739765165 25.435576227338018 24.594356923010928 74-75 23.9535580571598 25.771714068527412 25.625392299418685 24.6493355748941 76-77 24.064452638318944 25.378801977043835 25.672898286961544 24.88384709767568 78-79 23.95153221828165 25.380988608506843 25.946462883969275 24.721016289242236 80-81 24.13685318792317 25.735214800245014 25.462570739526512 24.665361272305304 82-83 24.271125623271494 25.72322834446979 25.59494670650221 24.410699325756504 84-85 24.25632127312133 25.73211825932479 25.39883613060899 24.61272433694489 86-87 23.882524865637397 25.935491441136104 25.64180045099278 24.540183242233716 88-89 23.85599103705353 25.529793533027206 25.75377256901841 24.86044286090085 90-91 24.11325975215558 25.426574008887275 25.7483654935566 24.711800745400545 92-93 24.152962718215697 25.593355865268908 25.685838788890063 24.567842627625332 94-95 24.12883702048777 25.418544625151128 25.707063394957814 24.745554959403293 96-97 23.93613967663567 25.424518987828886 25.761364718855727 24.877976616679714 98-99 23.772501987962773 25.477812884522148 25.603698793596003 25.14598633391908 100-101 23.877879642874603 25.45053094093174 25.776555326521184 24.895034089672478 102-103 23.696313527579544 25.41920119859638 25.931033395103103 24.953451878720973 104-105 23.814882933702332 25.48534356890004 25.696264457638087 25.003509039759546 106-107 23.793555810769167 25.380173477263718 25.903999237933984 24.922271474033135 108-109 23.734397611871 25.37462764340066 25.881385892021946 25.009588852706386 110-111 23.64909876832933 25.725003848182272 25.74989086302742 24.876006520460976 112-113 23.637099999621494 25.75073209074519 25.797414309740308 24.81475359989301 114-115 23.70571253111939 25.794216658765585 25.697637339293365 24.802433470821658 116-117 23.405229745641066 25.672548393109977 25.85078858114691 25.071433280102042 118-119 23.51040855398255 25.537955834152893 25.890571379303157 25.061064232561403 120-121 23.44397574570782 25.561384411226523 26.043050958554282 24.951588884511377 122-123 23.368060155308694 25.80581366741735 25.786478933656316 25.039647243617647 124-125 23.327265908695928 25.66293526885336 25.802503908710438 25.207294913740274 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 283.0 1 250.5 2 201.0 3 161.5 4 139.0 5 123.5 6 117.0 7 145.0 8 189.0 9 212.5 10 213.0 11 211.5 12 224.5 13 254.5 14 282.0 15 309.0 16 331.0 17 373.5 18 433.5 19 474.0 20 505.5 21 536.0 22 634.5 23 796.0 24 985.5 25 1248.0 26 1618.5 27 2236.0 28 3046.5 29 4124.5 30 5715.5 31 7436.5 32 9727.5 33 12464.0 34 15268.5 35 18245.0 36 21892.5 37 26066.5 38 29666.5 39 33330.5 40 36896.5 41 39876.5 42 43544.0 43 48233.0 44 52460.5 45 57003.5 46 60914.5 47 64237.5 48 69112.0 49 72475.5 50 73473.5 51 74753.0 52 74358.5 53 72366.5 54 71640.5 55 69644.5 56 64976.5 57 59438.0 58 54207.0 59 48228.5 60 40842.5 61 33746.5 62 27010.0 63 20390.5 64 14843.5 65 10813.5 66 7959.0 67 5965.0 68 4471.5 69 3228.5 70 2334.5 71 1692.5 72 1188.5 73 797.0 74 553.0 75 389.0 76 256.5 77 154.5 78 109.0 79 79.0 80 47.0 81 36.5 82 35.0 83 33.0 84 21.0 85 14.0 86 16.5 87 14.0 88 7.0 89 4.5 90 6.0 91 5.5 92 4.0 93 4.0 94 2.5 95 1.0 96 2.0 97 2.5 98 3.0 99 2.5 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012868527178140158 2 0.01072377264845013 3 0.010029881477079828 4 0.011796149913295145 5 0.008074369994127157 6 0.024664677091435303 7 0.010660691632871012 8 0.010156043508238066 9 0.0070019927292821445 10-11 0.0064973446046491965 12-13 0.005614210386541539 14-15 0.005361886324225065 16-17 0.0040371849970635785 18-19 0.00520418378527727 20-21 0.004667995152854763 22-23 0.004825697691802559 24-25 0.0052988053086459475 26-27 0.00438413058274873 28-29 0.005361886324225065 30-31 0.004762616676223441 32-33 0.006560425620228315 34-35 0.0067496686669656705 36-37 0.006087318003384927 38-39 0.006276561050122283 40-41 0.006402723081280519 42-43 0.006055777495595368 44-45 0.006087318003384927 46-47 0.007727424408442007 48-49 0.007128154760440381 50-51 0.005109562261908592 52-53 0.004825697691802559 54-55 0.005330345816435506 56-57 0.006308101557911842 58-59 0.006308101557911842 60-61 0.004731076168433881 62-63 0.005014940738539914 64-65 0.003343293825693276 66-67 0.003406374841272395 68-69 0.00558266987875198 70-71 0.00438413058274873 72-73 0.0040371849970635785 74-75 0.003658698903588868 76-77 0.0042895090593800525 78-79 0.0028386457010603286 80-81 0.0029017267166394473 82-83 0.004983400230750355 84-85 0.007538181361704651 86-87 0.0058980749566475725 88-89 0.004415671090538289 90-91 0.004731076168433881 92-93 0.006655047143596993 94-95 0.006150399018964046 96-97 0.007317397807177736 98-99 0.006150399018964046 100-101 0.006655047143596993 102-103 0.004762616676223441 104-105 0.004510292613906967 106-107 0.006213480034543164 108-109 0.005614210386541539 110-111 0.006245020542332723 112-113 0.004857238199592119 114-115 0.0023655380842169406 116-117 0.0026809431621125325 118-119 0.13209164662267397 120-121 0.008925963704445256 122-123 0.002081673514110908 124-125 0.001356241834951046 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1585263.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.35617301255232 #Duplication Level Percentage of deduplicated Percentage of total 1 80.78129252237078 50.37212252702551 2 10.452239135604017 13.035232638165889 3 3.389671778710538 6.341008796671208 4 1.637803804830115 4.085087096584124 5 0.9422704432990061 2.9378189393483596 6 0.604453179898784 2.261483223825359 7 0.4151117092450209 1.8119344292853186 8 0.30658776245797803 1.5294111647488773 9 0.24107263654522432 1.3529130329705537 >10 1.164180115126535 12.58369501300853 >50 0.05085466795129505 2.1405824355641263 >100 0.014259999899318799 1.4584147565055388 >500 2.0224406140766866E-4 0.09029594629670855 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.308101557911841E-5 0.0 8 0.0 0.0 0.0 6.308101557911841E-5 0.0 9 0.0 0.0 0.0 6.308101557911841E-5 0.0 10-11 0.0 0.0 0.0 6.308101557911841E-5 0.0 12-13 0.0 0.0 0.0 6.308101557911841E-5 0.0 14-15 0.0 0.0 0.0 6.308101557911841E-5 3.784860934747105E-4 16-17 0.0 0.0 0.0 6.308101557911841E-5 3.784860934747105E-4 18-19 0.0 0.0 0.0 6.308101557911841E-5 4.415671090538289E-4 20-21 0.0 0.0 0.0 6.308101557911841E-5 4.731076168433881E-4 22-23 0.0 0.0 0.0 9.462152336867762E-5 5.677291402120658E-4 24-25 0.0 0.0 0.0 2.2078355452691446E-4 7.885126947389802E-4 26-27 0.0 0.0 0.0 7.885126947389802E-4 9.462152336867762E-4 28-29 0.0 0.0 0.0 0.0038479419503262237 9.462152336867762E-4 30-31 0.0 0.0 0.0 0.013404715810562663 9.777557414763355E-4 32-33 0.0 0.0 0.0 0.03144588626619053 0.0010092962492658946 34-35 0.0 0.0 0.0 0.05223108089951005 0.0010723772648450131 36-37 0.0 0.0 0.0 0.0854432356019159 0.0010723772648450131 38-39 0.0 0.0 0.0 0.14070220524922364 0.0010723772648450131 40-41 0.0 0.0 0.0 0.20860891852014463 0.0010723772648450131 42-43 0.0 0.0 0.0 0.26632804777503793 0.0010723772648450131 44-45 0.0 0.0 0.0 0.3313330343293195 0.0011039177726345725 46-47 0.0 0.0 0.0 0.4031507705661458 0.0011985392960032499 48-49 0.0 0.0 0.0 0.48402063253857563 0.0013877823427406052 50-51 0.0 0.0 0.0 0.5693692466171228 0.0014508633583197237 52-53 0.0 0.0 0.0 0.6542762935866162 0.001640106405057079 54-55 0.0 0.0 0.0 0.7446713889114929 0.0018608899595839933 56-57 0.0 0.0 0.0 0.8330163512300484 0.0018924304673735525 58-59 0.0 0.0 0.0 0.939938672636654 0.0018924304673735525 60-61 0.0 0.0 0.0 1.0555346336853884 0.0018924304673735525 62-63 0.0 0.0 0.0 1.1765240215661377 0.0018924304673735525 64-65 0.0 0.0 0.0 1.28940749894497 0.0018924304673735525 66-67 0.0 0.0 0.0 1.414276369283835 0.0018924304673735525 68-69 0.0 0.0 0.0 1.5620436482779199 0.0018924304673735525 70-71 0.0 0.0 0.0 1.7196831062101368 0.0018924304673735525 72-73 0.0 0.0 0.0 1.8696266802417012 0.002586321638743855 74-75 0.0 0.0 0.0 2.0190971466564225 0.002586321638743855 76-77 0.0 0.0 0.0 2.1948093155520567 0.002586321638743855 78-79 0.0 0.0 0.0 2.4002011022776664 0.002586321638743855 80-81 0.0 0.0 0.0 2.6019657306074766 0.002586321638743855 82-83 0.0 0.0 0.0 2.8142648885389994 0.0026494026543229733 84-85 0.0 0.0 0.0 3.0350169025581244 0.0026494026543229733 86-87 0.0 0.0 0.0 3.273116195861507 0.002712483669902092 88-89 0.0 0.0 0.0 3.542503672892132 0.0027755646854812103 90-91 0.0 0.0 0.0 3.8263367024903756 0.0027755646854812103 92-93 0.0 0.0 0.0 4.116162428568636 0.0027755646854812103 94-95 0.0 0.0 0.0 4.400657808830459 0.0027755646854812103 96-97 0.0 0.0 0.0 4.711174108018669 0.0027755646854812103 98-99 0.0 0.0 0.0 5.068086494165321 0.0027755646854812103 100-101 0.0 0.0 0.0 5.454457714587422 0.0027755646854812103 102-103 0.0 0.0 0.0 5.850764194963233 0.0028071051932707695 104-105 0.0 0.0 0.0 6.25814139357318 0.002870186208849888 106-107 0.0 0.0 0.0 6.683906708224439 0.0029648077322185656 108-109 0.0 0.0 0.0 7.141464854727575 0.0030909697633768026 110-111 0.0 3.154050778955921E-5 0.0 7.650749434005588 0.003311753317903717 112-113 0.0 1.2616203115823683E-4 0.0 8.159403203127809 0.003343293825693276 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1250 0.0 50.941856 1 GTATCAA 2105 0.0 50.040565 1 TCAACGC 2500 0.0 41.89082 4 CAACGCA 2560 0.0 41.372578 5 GTACATG 7495 0.0 40.09782 1 AACGCAG 2720 0.0 38.716476 6 TACATGG 7775 0.0 38.572376 2 ACATGGG 7915 0.0 37.288677 3 ATCAACG 2855 0.0 36.473557 3 TATCAAC 2925 0.0 36.210983 2 CATGGGG 7300 0.0 33.990643 4 ATGGGGG 4480 0.0 30.415152 5 ACGCAGA 3640 0.0 29.093523 7 CGCAGAG 3855 0.0 27.470062 8 GAGTACA 5285 0.0 25.899054 1 AGTACAT 5040 0.0 25.383652 2 TGGGGGG 2990 0.0 23.480223 6 GCAGAGT 4745 0.0 22.191536 9 AGAGTAC 4310 0.0 21.398678 5 GTGGTAT 950 0.0 20.67242 1 >>END_MODULE