##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921320_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2011593 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.385929459885773 33.0 30.0 34.0 22.0 34.0 2 30.127850912187505 33.0 31.0 34.0 26.0 34.0 3 30.363329460780584 33.0 31.0 34.0 27.0 34.0 4 32.57519985404602 37.0 35.0 37.0 19.0 37.0 5 32.23734821109439 37.0 35.0 37.0 19.0 37.0 6 32.39238603435188 37.0 35.0 37.0 17.0 37.0 7 32.59674645914954 37.0 35.0 37.0 17.0 37.0 8 32.852501475199006 37.0 35.0 37.0 17.0 37.0 9 34.61721779703946 39.0 37.0 39.0 19.0 39.0 10-11 34.79312564718609 39.0 37.0 39.0 26.0 39.0 12-13 34.819246239174625 39.0 37.0 39.0 26.5 39.0 14-15 36.21637577780396 41.0 38.0 41.0 27.0 41.0 16-17 36.24454673485143 41.0 38.0 41.0 27.0 41.0 18-19 36.26488981618051 41.0 38.0 41.0 27.0 41.0 20-21 36.262863561366544 41.0 38.0 41.0 27.0 41.0 22-23 36.21442036236952 41.0 38.0 41.0 27.0 41.0 24-25 36.15756069940589 41.0 38.0 41.0 27.0 41.0 26-27 36.07091866992975 41.0 38.0 41.0 26.0 41.0 28-29 36.00498684376014 40.0 38.0 41.0 25.0 41.0 30-31 35.92647344666639 40.0 38.0 41.0 25.0 41.0 32-33 35.81769771519387 40.0 37.0 41.0 24.5 41.0 34-35 35.74044650185201 40.0 37.0 41.0 24.0 41.0 36-37 35.66352711507746 40.0 37.0 41.0 24.0 41.0 38-39 35.57347236742224 40.0 37.0 41.0 23.5 41.0 40-41 35.4518990670578 40.0 36.5 41.0 22.5 41.0 42-43 35.31158042407186 40.0 36.0 41.0 20.5 41.0 44-45 35.17175293411739 40.0 36.0 41.0 18.5 41.0 46-47 34.98093401597639 40.0 35.0 41.0 16.0 41.0 48-49 34.78824593245254 40.0 35.0 41.0 13.0 41.0 50-51 34.61110671989811 40.0 35.0 41.0 10.0 41.0 52-53 34.4227634516525 39.0 35.0 41.0 8.5 41.0 54-55 34.21582646191352 39.0 35.0 41.0 7.5 41.0 56-57 33.96674774668633 39.0 35.0 41.0 6.5 41.0 58-59 33.89199107374106 38.5 35.0 41.0 2.0 41.0 60-61 33.64707100293151 38.0 35.0 41.0 2.0 41.0 62-63 33.35600591173264 37.0 34.5 40.0 2.0 41.0 64-65 33.04811584649579 37.0 34.0 40.0 2.0 41.0 66-67 32.72942140880387 36.0 34.0 39.0 2.0 41.0 68-69 32.38651108847565 35.5 34.0 39.0 2.0 41.0 70-71 32.05486273813838 35.0 34.0 38.5 2.0 40.5 72-73 31.713187260047135 35.0 33.5 37.0 2.0 39.5 74-75 31.38364967466083 35.0 33.0 37.0 2.0 39.0 76-77 31.091728794045316 35.0 33.0 36.0 2.0 39.0 78-79 30.84173115535797 35.0 33.0 36.0 2.0 37.0 80-81 30.619601231461832 35.0 33.0 35.5 2.0 37.0 82-83 30.428024704798634 35.0 33.0 35.0 2.0 36.5 84-85 30.26354138237705 35.0 33.0 35.0 2.0 36.0 86-87 30.128962220488937 35.0 33.0 35.0 2.0 36.0 88-89 30.014879252413387 35.0 32.5 35.0 2.0 36.0 90-91 29.922217118472773 35.0 32.0 35.0 2.0 35.0 92-93 29.858153712008345 35.0 32.0 35.0 2.0 35.0 94-95 29.792748085721115 35.0 32.0 35.0 2.0 35.0 96-97 29.728587492599146 35.0 32.0 35.0 2.0 35.0 98-99 29.674787096594592 35.0 32.0 35.0 2.0 35.0 100-101 29.621576283075154 35.0 32.0 35.0 2.0 35.0 102-103 28.94380846423705 34.0 30.5 35.0 2.0 35.0 104-105 29.49484861003195 35.0 32.0 35.0 2.0 35.0 106-107 29.558325913840427 35.0 32.0 35.0 2.0 35.0 108-109 29.631638706239283 35.0 32.0 35.0 2.0 35.0 110-111 29.743874382143904 35.0 33.0 35.0 2.0 35.0 112-113 29.707694598261178 35.0 33.0 35.0 2.0 35.0 114-115 29.6471169863884 35.0 33.0 35.0 2.0 35.0 116-117 29.585756661511546 35.0 33.0 35.0 2.0 35.0 118-119 29.50896503417938 35.0 33.0 35.0 2.0 35.0 120-121 29.412529274062894 35.0 32.0 35.0 2.0 35.0 122-123 29.296517983508593 35.0 32.0 35.0 2.0 35.0 124-125 28.77176844421312 34.5 31.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 129718.0 3 7252.0 4 5783.0 5 5507.0 6 5549.0 7 5948.0 8 6288.0 9 6269.0 10 6454.0 11 6350.0 12 7039.0 13 7812.0 14 9044.0 15 7810.0 16 5527.0 17 4957.0 18 4522.0 19 4163.0 20 4133.0 21 4117.0 22 4961.0 23 6256.0 24 8101.0 25 10265.0 26 12471.0 27 14416.0 28 17587.0 29 20867.0 30 25403.0 31 31628.0 32 41338.0 33 55489.0 34 85342.0 35 146887.0 36 341326.0 37 710447.0 38 234308.0 39 259.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.68607013250442 17.262572562300612 11.497129419930411 27.554227885264552 2 16.13919913223003 19.02323183665881 37.50694101639845 27.330628014712715 3 19.22660299573522 22.51151202057275 28.179557196709276 30.082327786982756 4 13.647311169295055 15.360925515824519 31.0974888203631 39.894274494517326 5 14.830890356323772 37.212337340950896 32.10503987866608 15.851732424059248 6 35.522608072045045 33.23947080232074 15.81530599151955 15.42261513411467 7 30.911689127909753 31.286744816942196 18.373900141609255 19.4276659135388 8 28.782599876506016 34.8533434355788 17.35219748696701 19.011859200948177 9 28.057651598687922 15.524777500146659 17.536548043164622 38.8810228580008 10-11 27.44333821681984 25.21531999596329 25.096779036569476 22.24456275064739 12-13 27.083385144605675 22.34026626185898 25.918327860405014 24.658020733130332 14-15 24.692196681933172 23.70076849541632 22.99269782704553 28.614336995604976 16-17 24.968171991053858 26.727001933293664 23.741557064475767 24.563269011176715 18-19 25.129213513866873 25.76450604073488 25.292566637485812 23.813713807912436 20-21 25.60609924572217 24.74359872996178 25.241686563832744 24.408615460483308 22-23 25.517139898577895 24.365366155082064 25.042391776070012 25.075102170270032 24-25 25.116164154478565 24.840163989435236 24.985546280982284 25.05812557510391 26-27 24.835739635204536 24.888036496448336 25.234726905492316 25.041496962854815 28-29 24.829177671626418 25.212679702106737 25.086560750609095 24.87158187565775 30-31 25.28568154691332 24.999788724657524 25.04982369694068 24.664706031488475 32-33 24.890099538027822 25.041770378003903 25.11874917043358 24.949380913534696 34-35 25.081639277925504 25.13910617107934 25.351052623468068 24.428201927527088 36-37 25.168461015722364 25.100430355444665 25.27852304119173 24.452585587641238 38-39 25.04480280056652 25.309717224110447 25.24223339413092 24.40324658119212 40-41 24.868276037946046 25.315409230396007 25.202091079060228 24.614223652597715 42-43 24.78142944422654 25.276435143689604 25.082061828610456 24.860073583473397 44-45 24.646188369118406 25.301241354488706 25.286800063432313 24.765770212960575 46-47 24.688816276453537 25.304820607349498 24.94155129790171 25.06481181829525 48-49 24.623097216981765 25.4499543396701 24.91351381715884 25.013434626189294 50-51 24.564685798767442 25.52260820155966 25.092749875347547 24.819956124325348 52-53 24.821397767838725 25.445952536124356 25.058821540937952 24.67382815509897 54-55 24.426983987317513 25.14765660846901 25.31207853676166 25.113280867451813 56-57 24.56369156186167 25.28943479123262 25.014851413780026 25.13202223312569 58-59 24.61887171013222 25.386049762551373 25.114374528048167 24.880703999268242 60-61 24.932727445362953 25.19856153804472 25.18218148502207 24.686529531570255 62-63 24.67246107935353 25.272010789458903 25.262316979627585 24.793211151559984 64-65 24.51072359070647 24.970930998467384 25.276012593004648 25.2423328178215 66-67 24.5688615937717 25.39452563217311 24.991983964947185 25.044628809108005 68-69 24.441748405368283 25.268481248443397 25.113653706291483 25.17611663989684 70-71 24.395267830023272 25.14522072804986 25.2430039277329 25.216507514193975 72-73 24.504708457426528 25.44712076448864 24.87148245196717 25.176688326117656 74-75 24.290375836463937 25.472374381895346 25.016094209912243 25.221155571728477 76-77 24.372574372648938 25.102915947709104 25.05444689855254 25.470062781089414 78-79 24.248717310111935 25.141417771885266 25.234801473260248 25.37506344474255 80-81 24.43108521455384 25.419282131126923 24.829277095316996 25.320355559002245 82-83 24.461856846787597 25.40546223813664 24.92884992143043 25.203830993645337 84-85 24.45865043276647 25.480651404135923 24.784064172026845 25.276633991070756 86-87 24.099755765704096 25.581019619773983 24.95974583327741 25.359478781244515 88-89 24.130353406479344 25.36062215368616 24.96491586518744 25.544108574647055 90-91 24.295829961204777 25.177173456990197 25.023339769376236 25.503656812428787 92-93 24.254884644418368 25.423664777691418 25.041602776318868 25.279847801571346 94-95 24.308556912690957 25.2675744063154 24.8953066976869 25.528561983306737 96-97 24.0672156533281 25.255010352532953 24.977070320170412 25.70070367396854 98-99 23.93205774236854 25.31230884218234 24.901937049314956 25.85369636613416 100-101 23.974556483344294 25.31130800315968 25.011446152377744 25.70268936111828 102-103 23.765269614678516 25.283767640869698 25.0501716798577 25.90079106459408 104-105 23.814334027145676 25.299974000679065 25.03702293358839 25.84866903858687 106-107 23.90727635669387 25.187308251853445 25.06384873064374 25.841566660808944 108-109 23.81672850847889 25.224947106359963 25.1094659730839 25.84885841207725 110-111 23.710828735379053 25.583706961134588 24.942321544773442 25.763142758712913 112-113 23.663424268621085 25.6394112678759 24.99777537722891 25.699389086274106 114-115 23.652668266398617 25.620045267741343 24.902253792652267 25.825032673207772 116-117 23.408706147933078 25.45486044914479 25.044759625339008 26.091673777583125 118-119 23.51082093660899 25.426870780848848 25.009861619174718 26.052446663367444 120-121 23.419185818183628 25.514170382632646 25.122142186031944 25.94450161315179 122-123 23.366067495940957 25.702142319535405 24.83152362497129 26.10026655955235 124-125 23.182283666154635 25.57039456350449 24.80547725928246 26.441844511058417 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29.0 1 33.0 2 50.5 3 60.5 4 52.0 5 72.5 6 145.0 7 359.0 8 552.0 9 613.5 10 587.0 11 521.5 12 541.0 13 602.0 14 666.5 15 718.5 16 736.0 17 751.0 18 826.5 19 902.5 20 921.0 21 998.5 22 1125.0 23 1278.0 24 1474.0 25 1688.5 26 2074.0 27 2599.0 28 3266.5 29 4220.0 30 5658.5 31 7406.5 32 9687.0 33 12432.0 34 15095.0 35 18129.0 36 22332.0 37 26865.5 38 30773.0 39 35207.5 40 39760.5 41 43542.5 42 48143.5 43 54757.0 44 61405.0 45 68321.0 46 73911.0 47 78776.5 48 86123.0 49 91620.0 50 94273.5 51 96214.5 52 96413.0 53 95318.5 54 95577.5 55 94158.5 56 88099.0 57 80628.0 58 74287.0 59 67462.0 60 58142.0 61 48392.5 62 39878.5 63 31129.5 64 22740.0 65 16858.5 66 12714.0 67 9627.0 68 7336.0 69 5489.0 70 4209.5 71 3147.0 72 2353.0 73 1889.5 74 1415.5 75 988.5 76 736.5 77 536.5 78 394.5 79 313.5 80 269.0 81 241.5 82 203.5 83 168.5 84 153.5 85 137.0 86 132.5 87 137.0 88 121.0 89 119.0 90 117.5 91 112.5 92 111.5 93 96.5 94 82.5 95 82.5 96 69.5 97 55.5 98 45.0 99 18.0 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30199946012936013 2 0.0 3 0.0 4 0.017250010315207898 5 0.16161320903383536 6 0.04230478034075481 7 0.021127534247733015 8 0.007904183400916587 9 0.006512251732830647 10-11 0.0025850159550167453 12-13 0.05423562321006287 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 2.4855922644391785E-4 92-93 4.225506849546603E-4 94-95 1.491355358663507E-4 96-97 3.9769476231026854E-4 98-99 1.2427961322195892E-4 100-101 0.0 102-103 0.0 104-105 9.942369057756714E-5 106-107 1.2427961322195892E-4 108-109 4.474066075990521E-4 110-111 4.971184528878357E-4 112-113 7.953895246205371E-4 114-115 2.982710717327014E-4 116-117 7.208217566873617E-4 118-119 3.2312699437709317E-4 120-121 1.491355358663507E-4 122-123 0.0017399145851074247 124-125 1.491355358663507E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2011593.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.0679247384582 #Duplication Level Percentage of deduplicated Percentage of total 1 81.43449931991579 48.91601376262727 2 9.638363015484513 11.579129284321256 3 3.327563110291306 5.996394314143442 4 1.5971183123180792 3.83742330330943 5 0.9530111211493151 2.862270015005536 6 0.5993386032496093 2.1600615667710117 7 0.44710857056752135 1.8799818776738653 8 0.31819275009589126 1.529054253206643 9 0.2400700981057065 1.297846132647107 >10 1.3535368287527836 14.480716086886405 >50 0.06675619258172708 2.7290501963556144 >100 0.02320017287935038 2.1169686155387075 >500 9.935236866077332E-4 0.40904916843471767 >1k 2.483809216519309E-4 0.20604142307903014 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.971184528878357E-5 7 0.0 0.0 0.0 0.0 4.971184528878357E-5 8 0.0 0.0 0.0 0.0 4.971184528878357E-5 9 0.0 0.0 0.0 0.0 9.942369057756714E-5 10-11 0.0 0.0 0.0 0.0 9.942369057756714E-5 12-13 0.0 0.0 0.0 0.0 9.942369057756714E-5 14-15 0.0 0.0 0.0 4.971184528878357E-5 1.739914585107425E-4 16-17 0.0 0.0 0.0 9.942369057756714E-5 2.4855922644391785E-4 18-19 0.0 0.0 0.0 1.2427961322195892E-4 2.4855922644391785E-4 20-21 0.0 0.0 0.0 1.491355358663507E-4 2.734151490883096E-4 22-23 0.0 0.0 0.0 1.9884738115513427E-4 3.2312699437709317E-4 24-25 0.0 0.0 0.0 5.219743755322274E-4 3.4798291702148494E-4 26-27 0.0 0.0 0.0 9.942369057756714E-4 3.7283883966587677E-4 28-29 0.0 0.0 0.0 0.00347982917021485 3.9769476231026854E-4 30-31 0.0 0.0 0.0 0.011881131024019272 3.9769476231026854E-4 32-33 0.0 0.0 0.0 0.029653115714759398 4.971184528878357E-4 34-35 0.0 0.0 0.0 0.04981126897936113 4.971184528878357E-4 36-37 0.0 0.0 0.0 0.08311820532284613 4.971184528878357E-4 38-39 0.0 0.0 0.0 0.14108221692956774 4.971184528878357E-4 40-41 0.0 0.0 0.0 0.2066521408654733 4.971184528878357E-4 42-43 0.0 0.0 0.0 0.26488956762128324 4.971184528878357E-4 44-45 0.0 0.0 0.0 0.3327462364404728 4.971184528878357E-4 46-47 0.0 0.0 0.0 0.40788569059446916 5.468302981766192E-4 48-49 0.0 0.0 0.0 0.4906310570776494 5.965421434654028E-4 50-51 0.0 0.0 0.0 0.5727053136494311 6.959658340429699E-4 52-53 0.0 0.0 0.0 0.6566934762648309 7.705336019761453E-4 54-55 0.0 0.0 0.0 0.7480638479056152 8.451013699093206E-4 56-57 0.0 0.0 0.0 0.8477858095549149 8.451013699093206E-4 58-59 0.0 0.0 0.0 0.9580466824054369 8.451013699093206E-4 60-61 0.0 0.0 0.0 1.076186882734231 8.451013699093206E-4 62-63 0.0 0.0 0.0 1.2047417146510253 8.948132151981042E-4 64-65 0.0 0.0 0.0 1.3219125339966882 8.948132151981042E-4 66-67 0.0 0.0 0.0 1.45322637332701 9.19669137842496E-4 68-69 0.0 0.0 0.0 1.6016410874366733 9.445250604868877E-4 70-71 0.0 0.0 0.0 1.7601970179852486 9.445250604868877E-4 72-73 0.0 0.0 0.0 1.904063098250988 0.0010439487510644548 74-75 0.0 0.0 0.0 2.055162252006246 0.0010688046737088465 76-77 0.0 0.0 0.0 2.237207029453771 0.0010936605963532385 78-79 0.0 0.0 0.0 2.43913654501681 0.0011185165189976302 80-81 0.0 0.0 0.0 2.6478268715391238 0.001143372441642022 82-83 0.0 0.0 0.0 2.858704519254143 0.0012427961322195892 84-85 0.0 0.0 0.0 3.0772129352209916 0.0012427961322195892 86-87 0.0 0.0 0.0 3.3104857692386087 0.0012427961322195892 88-89 0.0 0.0 0.0 3.577811217279042 0.0012427961322195892 90-91 0.0 0.0 0.0 3.869768884660068 0.0012427961322195892 92-93 0.0 0.0 0.0 4.15225644551358 0.0012925079775083727 94-95 0.0 0.0 0.0 4.440833707414969 0.0012925079775083727 96-97 0.0 0.0 0.0 4.756106230236435 0.0014664994360191151 98-99 0.0 0.0 0.0 5.116989371110359 0.0015410672039522905 100-101 0.0 0.0 0.0 5.50315098531363 0.0015410672039522905 102-103 0.0 0.0 0.0 5.895725427559153 0.0016404908945298576 104-105 0.0 0.0 0.0 6.306320413721862 0.0016404908945298576 106-107 0.0 0.0 0.0 6.746369668218174 0.0016653468171742495 108-109 0.0 0.0 0.0 7.199890832787746 0.0016902027398186413 110-111 0.0 0.0 0.0 7.695095379631963 0.0017647705077518164 112-113 2.4855922644391784E-5 0.0 0.0 8.196663042673144 0.0017896264303962084 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2230 0.0 71.23869 1 GTATCAA 3625 0.0 44.812584 1 GTACATG 9460 0.0 39.52049 1 TACATGG 9930 0.0 37.26738 2 ACATGGG 9800 0.0 37.032047 3 TCAACGC 4730 0.0 34.268436 5 CATGGGG 9215 0.0 33.304153 4 CAACGCA 4915 0.0 33.088284 6 AACGCAG 5200 0.0 31.266233 7 TATCAAC 5180 0.0 31.176407 3 ATCAACG 5285 0.0 30.669764 4 ATGGGGG 5740 0.0 30.62645 5 ACGCAGA 6540 0.0 24.674809 8 GTGGTAT 1065 0.0 23.552599 1 CGCAGAG 6955 0.0 23.288097 9 TGGGGGG 4080 0.0 23.215183 6 CCTATAC 495 0.0 22.873621 3 TGGTATC 1135 0.0 22.051592 2 TATCCGT 190 3.276903E-5 21.947226 6 TATACAG 770 0.0 21.669746 5 >>END_MODULE