##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921319_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1613864 Sequences flagged as poor quality 0 Sequence length 125 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.47974364630477 33.0 30.0 34.0 23.0 34.0 2 30.21588869941953 33.0 31.0 34.0 26.0 34.0 3 30.453659044380444 33.0 31.0 34.0 27.0 34.0 4 32.68919066290592 37.0 35.0 37.0 19.0 37.0 5 32.35442453639216 37.0 35.0 37.0 19.0 37.0 6 32.51549634913475 37.0 35.0 37.0 17.0 37.0 7 32.71712982010876 37.0 35.0 37.0 17.0 37.0 8 32.96291137295336 37.0 35.0 37.0 17.0 37.0 9 34.7309488284019 39.0 37.0 39.0 24.0 39.0 10-11 34.9003782227003 39.0 37.0 39.0 26.5 39.0 12-13 34.92746445797168 39.0 37.0 39.0 27.0 39.0 14-15 36.33809943093098 41.0 38.0 41.0 27.0 41.0 16-17 36.36378901815766 41.0 38.0 41.0 27.0 41.0 18-19 36.380882156117245 41.0 38.0 41.0 27.0 41.0 20-21 36.379436557231585 41.0 38.0 41.0 27.0 41.0 22-23 36.33015204502982 41.0 38.0 41.0 27.0 41.0 24-25 36.27931071019616 41.0 38.0 41.0 27.0 41.0 26-27 36.19156477869262 41.0 38.0 41.0 27.0 41.0 28-29 36.1237678639588 40.5 38.0 41.0 26.5 41.0 30-31 36.03855963079913 40.0 38.0 41.0 25.5 41.0 32-33 35.92489670752926 40.0 37.5 41.0 25.0 41.0 34-35 35.848575530527974 40.0 37.0 41.0 25.0 41.0 36-37 35.7728773923949 40.0 37.0 41.0 24.5 41.0 38-39 35.68282116708719 40.0 37.0 41.0 24.0 41.0 40-41 35.5564768778534 40.0 37.0 41.0 23.5 41.0 42-43 35.4240973836705 40.0 36.0 41.0 22.5 41.0 44-45 35.28458098080136 40.0 36.0 41.0 21.5 41.0 46-47 35.09271877927756 40.0 35.5 41.0 18.5 41.0 48-49 34.89037335240144 40.0 35.0 41.0 15.5 41.0 50-51 34.70759772818528 40.0 35.0 41.0 13.5 41.0 52-53 34.515117754655904 39.5 35.0 41.0 11.0 41.0 54-55 34.31018660804132 39.0 35.0 41.0 8.5 41.0 56-57 34.05829456509346 39.0 35.0 41.0 8.0 41.0 58-59 33.975616284891416 39.0 35.0 41.0 7.0 41.0 60-61 33.72077479886781 38.0 35.0 41.0 4.0 41.0 62-63 33.4228438703633 37.0 34.5 40.0 2.0 41.0 64-65 33.106949222487145 37.0 34.0 40.0 2.0 41.0 66-67 32.776284123073566 36.0 34.0 39.0 2.0 41.0 68-69 32.432164977965925 35.5 34.0 39.0 2.0 41.0 70-71 32.093985304833616 35.0 34.0 38.0 2.0 40.5 72-73 31.749720546464882 35.0 33.5 37.0 2.0 39.5 74-75 31.423811733826394 35.0 33.0 37.0 2.0 39.0 76-77 31.135080465268448 35.0 33.0 36.0 2.0 39.0 78-79 30.884596223721452 35.0 33.0 36.0 2.0 37.0 80-81 30.666545322282424 35.0 33.0 35.0 2.0 37.0 82-83 30.47514319670059 35.0 33.0 35.0 2.0 36.5 84-85 30.31503769834385 35.0 33.0 35.0 2.0 36.0 86-87 30.183655809907155 35.0 33.0 35.0 2.0 36.0 88-89 30.07185487748658 35.0 33.0 35.0 2.0 36.0 90-91 29.97684532277813 35.0 32.0 35.0 2.0 35.0 92-93 29.916086485602257 35.0 32.0 35.0 2.0 35.0 94-95 29.854394794109044 35.0 32.0 35.0 2.0 35.0 96-97 29.79103474642225 35.0 32.0 35.0 2.0 35.0 98-99 29.734253629797802 35.0 32.0 35.0 2.0 35.0 100-101 29.686175848770404 35.0 32.0 35.0 2.0 35.0 102-103 29.007500941838963 34.0 30.5 35.0 2.0 35.0 104-105 29.560381481958828 35.0 32.0 35.0 2.0 35.0 106-107 29.62133953046849 35.0 32.0 35.0 2.0 35.0 108-109 29.696202096335256 35.0 32.5 35.0 2.0 35.0 110-111 29.80916545632098 35.0 33.0 35.0 2.0 35.0 112-113 29.771873280524257 35.0 33.0 35.0 2.0 35.0 114-115 29.7100015862551 35.0 33.0 35.0 2.0 35.0 116-117 29.64976014087928 35.0 33.0 35.0 2.0 35.0 118-119 29.573627641486517 35.0 33.0 35.0 2.0 35.0 120-121 29.48043236604819 35.0 33.0 35.0 2.0 35.0 122-123 29.367194199759087 35.0 32.5 35.0 2.0 35.0 124-125 28.839771814725403 34.5 31.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 99767.0 3 6115.0 4 4564.0 5 4309.0 6 4386.0 7 4753.0 8 4955.0 9 5069.0 10 5258.0 11 5242.0 12 5512.0 13 6431.0 14 7544.0 15 6569.0 16 4595.0 17 4018.0 18 3704.0 19 3294.0 20 3320.0 21 3437.0 22 3888.0 23 4806.0 24 6272.0 25 8354.0 26 9932.0 27 11798.0 28 13942.0 29 16582.0 30 20270.0 31 25207.0 32 33167.0 33 44668.0 34 68036.0 35 116703.0 36 274766.0 37 580163.0 38 182269.0 39 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.01577494903287 17.004624334941077 11.403585102680125 27.576015613345927 2 15.996205380379017 18.76267145186955 37.595547084512695 27.645576083238737 3 19.589259070157087 22.019079674619423 27.948575592491064 30.443085662732422 4 13.66321171275854 15.028150902471143 30.94535595321094 40.36328143155938 5 14.860930522670357 37.20030163010591 32.15457611970867 15.78419172751506 6 36.10944604407968 32.87844459665947 15.647387360023307 15.364721999237545 7 31.23363093578059 31.239208657615887 17.981149779184193 19.546010627419335 8 29.037325391602437 34.81726458927445 17.16469796511736 18.980712054005753 9 28.025557434515424 15.464404313607147 17.337959333910447 39.17207891796698 10-11 27.56744883071963 25.081661099697644 24.995561812565043 22.355328257017682 12-13 27.15902996710965 22.15823948268219 25.92705223707093 24.75567831313723 14-15 24.678690397703896 23.529337044509326 23.006647400276602 28.785325157510172 16-17 25.044923240124323 26.603325930809536 23.63182399508261 24.719926833983532 18-19 25.143940257667314 25.700771564394522 25.187748162174756 23.96754001576341 20-21 25.646956620880072 24.69765110319085 25.262196814601477 24.393195461327597 22-23 25.533223369503254 24.31016492095988 25.135606222085627 25.021005487451237 24-25 25.13517248045684 24.691950498926797 25.077794659277362 25.095082361339 26-27 24.920470374207493 24.730088780715104 25.337543931830687 25.011896913246716 28-29 24.94587524103642 25.083123485002456 25.15388533358449 24.817115940376635 30-31 25.302132025994755 24.87350235211889 25.050840715202767 24.773524906683587 32-33 24.976361081231133 25.012175747150938 25.139200081295577 24.87226309032236 34-35 25.072527796642095 25.074944357145334 25.320008377409746 24.532519468802825 36-37 25.190350611947476 24.9183946106983 25.28252070806462 24.608734069289607 38-39 25.072156018103136 25.149485954206796 25.20416838097882 24.574189646711247 40-41 25.017287702061637 25.190443556582213 25.169407087586066 24.62286165377008 42-43 24.878087620766063 25.089350775530033 25.038541041872175 24.99402056183173 44-45 24.767173689976353 25.16159973826791 25.254637317642626 24.81658925411311 46-47 24.74384458665662 25.10220811666906 24.978188992381018 25.1757583042933 48-49 24.83226591583925 25.31855224479882 24.799394496686215 25.049787342675717 50-51 24.752922179316226 25.42271219879742 24.9676862486554 24.856679373230953 52-53 24.908046774697247 25.29807344361111 24.927565147992645 24.866314633698998 54-55 24.50556552472823 25.07293055672597 25.193975452702333 25.22752846584347 56-57 24.668063727798625 25.260709700445638 24.891998334432145 25.179228237323592 58-59 24.715279602246536 25.305292143575915 25.000867483257572 24.978560770919977 60-61 25.034389514853792 25.083433300451585 25.14313473749957 24.739042447195057 62-63 24.773431962048846 25.23174195595168 25.076896194474873 24.917929887524597 64-65 24.7168286794922 25.002850302132025 25.07085479321678 25.209466225158998 66-67 24.61957761000927 25.218946577902475 25.013445990492382 25.148029821595873 68-69 24.47473888753947 25.13476972037297 25.049167711777446 25.34132368031011 70-71 24.478611580653638 25.011029429989147 25.187252457456143 25.32310653190108 72-73 24.570254990507255 25.314276791600783 24.805559824123964 25.309908393767998 74-75 24.361656248605833 25.354088076814403 24.986089286333918 25.298166388245853 76-77 24.41193929600016 24.98565554470513 24.982898187207844 25.61950697208687 78-79 24.35793846321623 24.982247574764667 25.14521050100876 25.514603461010342 80-81 24.531868856359644 25.182791114988625 24.904174081583083 25.381165947068652 82-83 24.523101079149175 25.21795516846525 25.01462328919909 25.244320463186487 84-85 24.495713393445794 25.23846495119787 24.775352817833472 25.49046883752286 86-87 24.16275473026228 25.37847055266119 25.007590478503765 25.451184238572765 88-89 24.16036915130395 25.122717899401685 25.011401208528106 25.705511740766262 90-91 24.35133024198808 24.933195898902042 25.070475422132212 25.644998436977666 92-93 24.367192043168593 25.11512006783742 25.061459849175126 25.456228039818857 94-95 24.32896988714029 25.007714414243598 25.02590060364517 25.637415094970944 96-97 24.09075023948823 24.93230507268917 25.082875940758107 25.894068747064487 98-99 24.00794738836339 25.021632870437926 25.029781019274555 25.94063872192413 100-101 24.019217232678837 25.091705372943444 25.09802560810576 25.79105178627195 102-103 23.821895773125863 25.000309815449135 25.106576514501842 26.07121789692316 104-105 23.87959080802063 25.129572606357353 25.00889945153354 25.98193713408848 106-107 23.911755721217627 25.00912408193766 25.078925632380976 26.00019456446373 108-109 23.788052050412105 24.944597063497202 25.19715947835575 26.07019140773494 110-111 23.733469735255518 25.262879385918712 25.090528410801944 25.91312246802383 112-113 23.716038573525594 25.32278342575191 25.085834955228265 25.87534304549423 114-115 23.645359572701473 25.32933463869233 24.972798136145638 26.05250765246056 116-117 23.386620805505324 25.210667739046194 25.176773771397894 26.225937684050592 118-119 23.546945551005386 25.14717828509182 25.083975737657376 26.221900426245416 120-121 23.411745606659302 25.098970606550864 25.219953614402215 26.26933017238762 122-123 23.333339529730623 25.246446211243857 25.09246573857028 26.327748520455234 124-125 23.19260581827397 25.218458686251964 24.94873327267145 26.64020222280261 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 55.0 1 44.0 2 48.0 3 57.5 4 49.5 5 59.5 6 127.0 7 308.5 8 467.5 9 525.5 10 516.0 11 472.0 12 469.5 13 499.5 14 540.0 15 585.0 16 636.5 17 678.5 18 730.0 19 792.5 20 821.0 21 878.5 22 965.5 23 1040.5 24 1157.0 25 1317.0 26 1560.5 27 1973.0 28 2490.5 29 3200.0 30 4241.5 31 5499.0 32 7120.0 33 9107.0 34 11224.5 35 13429.5 36 16338.5 37 19767.0 38 23050.0 39 26718.0 40 30871.0 41 34326.5 42 38156.5 43 43310.0 44 48138.0 45 52907.0 46 57831.5 47 62812.0 48 68144.5 49 72716.5 50 76064.5 51 78497.0 52 79108.5 53 78503.5 54 78321.0 55 77149.0 56 73271.5 57 67391.5 58 61597.0 59 55451.5 60 48040.5 61 40051.5 62 32357.5 63 25167.5 64 18406.5 65 13535.5 66 10220.5 67 7668.0 68 5751.5 69 4310.0 70 3322.0 71 2455.0 72 1824.0 73 1407.5 74 1044.0 75 785.0 76 598.5 77 427.5 78 288.5 79 222.5 80 189.5 81 155.5 82 150.0 83 143.5 84 127.5 85 112.0 86 113.0 87 109.5 88 98.0 89 88.0 90 83.5 91 82.0 92 72.0 93 72.0 94 66.5 95 59.5 96 58.0 97 46.0 98 33.5 99 17.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3088240396960339 2 0.0 3 0.0 4 0.014809178468569844 5 0.16228133225600175 6 0.04021404529749719 7 0.01871285312764892 8 0.006815939880931727 9 0.0053907888149187285 10-11 0.0018279111498862358 12-13 0.05756371044895977 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 2.1687081439328222E-4 92-93 3.4079699404658634E-4 94-95 1.2392617965330412E-4 96-97 3.7177853895991236E-4 98-99 3.098154491332603E-5 100-101 0.0 102-103 0.0 104-105 3.098154491332603E-5 106-107 1.8588926947995618E-4 108-109 3.4079699404658634E-4 110-111 3.7177853895991236E-4 112-113 6.815939880931727E-4 114-115 2.4785235930660824E-4 116-117 4.647231736998904E-4 118-119 3.0981544913326033E-4 120-121 6.196308982665206E-5 122-123 0.0014251510660129973 124-125 3.098154491332603E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1613864.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.69684407288578 #Duplication Level Percentage of deduplicated Percentage of total 1 82.59980462011198 53.439466799582156 2 9.520287551006755 12.318651184330394 3 3.06391520880114 5.9467693354905204 4 1.4498920085642286 3.7521374880241236 5 0.8571584376386631 2.772772289283349 6 0.5499411103235904 2.1347672558325006 7 0.3726249353054912 1.6875360135989965 8 0.26269458367982046 1.3596408415299994 9 0.20992565595667562 1.222337468729458 >10 1.0572043189894935 11.984863654604826 >50 0.04390145586730809 1.8907597698388081 >100 0.012266840961708061 1.2136924939793636 >500 9.58181982738378E-5 0.04196814417386588 >1k 2.874545948215134E-4 0.23463726100159876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.196308982665206E-5 0.0 9 0.0 0.0 0.0 6.196308982665206E-5 0.0 10-11 0.0 0.0 0.0 6.196308982665206E-5 0.0 12-13 0.0 0.0 0.0 6.196308982665206E-5 2.1687081439328222E-4 14-15 0.0 0.0 0.0 6.196308982665206E-5 2.4785235930660824E-4 16-17 0.0 0.0 0.0 6.196308982665206E-5 3.098154491332603E-4 18-19 0.0 0.0 0.0 9.294463473997809E-5 3.7177853895991236E-4 20-21 0.0 0.0 0.0 1.2392617965330412E-4 4.337416287865644E-4 22-23 0.0 0.0 0.0 1.5490772456663014E-4 5.886493533531946E-4 24-25 0.0 0.0 0.0 2.7883390421993426E-4 7.435570779198247E-4 26-27 0.0 0.0 0.0 8.055201677464768E-4 8.055201677464768E-4 28-29 0.0 0.0 0.0 0.0034699330302925156 8.055201677464768E-4 30-31 0.0 0.0 0.0 0.013105193498336911 8.055201677464768E-4 32-33 0.0 0.0 0.0 0.030857618733672723 8.674832575731288E-4 34-35 0.0 0.0 0.0 0.05369101733479401 9.91409437226433E-4 36-37 0.0 0.0 0.0 0.08742991974540605 9.91409437226433E-4 38-39 0.0 0.0 0.0 0.1418025310682932 9.91409437226433E-4 40-41 0.0 0.0 0.0 0.20788616636841767 9.91409437226433E-4 42-43 0.0 0.0 0.0 0.2701900531891163 9.91409437226433E-4 44-45 0.0 0.0 0.0 0.333640257171608 9.91409437226433E-4 46-47 0.0 0.0 0.0 0.40474290274769126 9.91409437226433E-4 48-49 0.0 0.0 0.0 0.48507804870794563 0.001115335616879737 50-51 0.0 0.0 0.0 0.5696886478662391 0.0011772987067063892 52-53 0.0 0.0 0.0 0.6525023174195596 0.0013012248863596932 54-55 0.0 3.098154491332603E-5 0.0 0.7439288564587847 0.0013631879761863454 56-57 0.0 6.196308982665206E-5 0.0 0.8359750263962762 0.0014251510660129975 58-59 0.0 6.196308982665206E-5 0.0 0.9375944937119856 0.0014871141558396494 60-61 0.0 6.196308982665206E-5 0.0 1.0510798927294989 0.0014871141558396494 62-63 0.0 6.196308982665206E-5 0.0 1.1777944114250023 0.0014871141558396494 64-65 0.0 6.196308982665206E-5 0.0 1.294068149484715 0.0014871141558396494 66-67 0.0 6.196308982665206E-5 0.0 1.4183661076769791 0.0015180957007529755 68-69 0.0 6.196308982665206E-5 0.0 1.557659133607293 0.0015490772456663016 70-71 0.0 9.294463473997809E-5 0.0 1.7106150208443833 0.0016110403354929535 72-73 0.0 1.2392617965330412E-4 0.0 1.860255882775748 0.0017969296049729097 74-75 0.0 1.2392617965330412E-4 0.0 2.0131498069230123 0.0018279111498862358 76-77 0.0 1.2392617965330412E-4 0.0 2.1839510640301785 0.0018588926947995619 78-79 0.0 1.2392617965330412E-4 0.0 2.3789179261697395 0.0018588926947995619 80-81 0.0 1.2392617965330412E-4 0.0 2.576951961255719 0.0018898742397128877 82-83 0.0 1.2392617965330412E-4 0.0 2.7870687988578964 0.002044781964279518 84-85 0.0 1.2392617965330412E-4 0.0 3.0013681450233722 0.002044781964279518 86-87 0.0 1.2392617965330412E-4 0.0 3.2342873996817576 0.002075763509192844 88-89 0.0 1.2392617965330412E-4 0.0 3.4937888198757765 0.00210674505410617 90-91 0.0 1.2392617965330412E-4 0.0 3.7716313146584843 0.00210674505410617 92-93 0.0 1.2392617965330412E-4 0.0 4.058520420555883 0.00210674505410617 94-95 0.0 1.2392617965330412E-4 0.0 4.346834677519295 0.002168708143932822 96-97 0.0 1.2392617965330412E-4 0.0 4.65221976572995 0.0023545974134127783 98-99 0.0 1.2392617965330412E-4 0.0 4.9946897632018565 0.0024165605032394305 100-101 0.0 1.2392617965330412E-4 0.0 5.369938235192061 0.0024165605032394305 102-103 0.0 1.2392617965330412E-4 0.0 5.7643333019387 0.002478523593066082 104-105 0.0 1.2392617965330412E-4 0.0 6.1728559531658185 0.0026024497727193865 106-107 0.0 1.2392617965330412E-4 0.0 6.591633495759246 0.0026644128625460386 108-109 0.0 1.2392617965330412E-4 0.0 7.034576643385068 0.0026644128625460386 110-111 0.0 1.2392617965330412E-4 0.0 7.512745807577343 0.0026953944074593647 112-113 0.0 1.2392617965330412E-4 0.0 8.011703588406458 0.002788339042199343 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1630 0.0 62.30021 1 GTATCAA 2645 0.0 50.81419 1 GTACATG 7485 0.0 41.020363 1 TACATGG 7875 0.0 38.815216 2 ACATGGG 7935 0.0 38.07117 3 CATGGGG 7205 0.0 36.387638 4 TCAACGC 3645 0.0 35.7999 4 TATCAAC 4010 0.0 33.581436 2 CAACGCA 3895 0.0 33.34911 5 ATGGGGG 4275 0.0 33.172333 5 ATCAACG 4120 0.0 31.527859 3 AACGCAG 4145 0.0 31.192015 6 ATGGGGA 2595 0.0 25.716738 5 ACGCAGA 5175 0.0 24.287682 7 TGGGGGG 2830 0.0 22.73765 6 CGCAGAG 5535 0.0 22.606684 2 AGAGTAC 5495 0.0 22.445944 5 TATAACG 135 0.0025346866 22.06843 2 GTGGTAT 945 0.0 21.491922 1 CAGAGTA 6025 0.0 21.163715 4 >>END_MODULE