##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921312_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1524120 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.01251607484975 31.0 31.0 34.0 26.0 34.0 2 29.96836535180957 31.0 31.0 34.0 26.0 34.0 3 30.189279715507965 31.0 31.0 34.0 26.0 34.0 4 33.682749389811825 37.0 35.0 37.0 28.0 37.0 5 33.69203081122221 37.0 35.0 37.0 28.0 37.0 6 33.69076713119702 37.0 35.0 37.0 29.0 37.0 7 33.69738012754901 37.0 35.0 37.0 29.0 37.0 8 33.67174303860588 37.0 35.0 37.0 28.0 37.0 9 35.25672650447471 39.0 37.0 39.0 28.0 39.0 10-11 35.26380271894601 39.0 37.0 39.0 28.5 39.0 12-13 35.178264834789914 39.0 37.0 39.0 28.0 39.0 14-15 36.43534728236622 40.0 38.0 41.0 27.0 41.0 16-17 36.407593562186705 40.0 38.0 41.0 27.0 41.0 18-19 36.37535397475264 40.0 37.5 41.0 27.0 41.0 20-21 36.409100661365244 40.0 38.0 41.0 27.0 41.0 22-23 36.347615673306564 40.0 37.5 41.0 27.0 41.0 24-25 36.32279610529355 40.0 37.0 41.0 27.0 41.0 26-27 36.28810428312731 40.0 37.0 41.0 27.0 41.0 28-29 36.22266127339054 40.0 37.0 41.0 27.0 41.0 30-31 36.14556432564365 40.0 37.0 41.0 27.0 41.0 32-33 36.07293454583628 40.0 37.0 41.0 27.0 41.0 34-35 35.948476497913546 40.0 37.0 41.0 26.5 41.0 36-37 35.835541164737684 40.0 36.5 41.0 26.0 41.0 38-39 35.73083484240087 40.0 36.0 41.0 25.5 41.0 40-41 35.62678201191507 40.0 36.0 41.0 25.0 41.0 42-43 35.41349992126604 40.0 35.5 41.0 24.5 41.0 44-45 35.10673864262657 40.0 35.0 41.0 24.0 41.0 46-47 34.86986523370863 39.0 35.0 41.0 23.0 41.0 48-49 34.64938915570953 39.0 35.0 41.0 22.5 41.0 50-51 34.46853594205181 39.0 34.5 40.5 22.0 41.0 52-53 34.260076962443904 38.5 34.0 40.0 21.0 41.0 54-55 34.048927905939166 38.0 34.0 40.0 20.0 41.0 56-57 33.792753523344615 38.0 34.0 40.0 18.5 41.0 58-59 33.50400821457628 37.5 33.0 40.0 18.0 41.0 60-61 33.21771710888906 37.0 33.0 40.0 16.0 41.0 62-63 32.900523580820405 36.5 33.0 39.5 13.5 41.0 64-65 32.54825407448233 36.0 32.5 39.0 12.0 41.0 66-67 32.21236877673674 35.5 32.0 39.0 9.0 40.0 68-69 31.864925333963207 35.0 32.0 38.5 8.0 40.0 70-71 31.836817967089203 35.0 32.0 38.0 7.5 40.0 72-73 31.560464727186837 35.0 32.0 37.0 7.0 39.0 74-75 31.242266028921605 35.0 32.0 37.0 4.0 39.0 76-77 30.950665301944728 35.0 32.0 36.0 2.0 39.0 78-79 30.67071818491982 35.0 31.5 36.0 2.0 37.5 80-81 30.395345182794006 35.0 31.0 35.0 2.0 37.0 82-83 30.177741253969504 35.0 31.0 35.0 2.0 36.5 84-85 29.962082710022834 35.0 31.0 35.0 2.0 36.0 86-87 29.795580728551556 35.0 31.0 35.0 2.0 36.0 88-89 29.6586800908065 34.5 31.0 35.0 2.0 35.5 90-91 29.53276152796368 34.0 31.0 35.0 2.0 35.0 92-93 29.420608613495 34.0 31.0 35.0 2.0 35.0 94-95 29.300829002965646 34.0 30.0 35.0 2.0 35.0 96-97 29.2138945752303 34.0 30.0 35.0 2.0 35.0 98-99 29.13384772852531 34.0 30.0 35.0 2.0 35.0 100-101 29.03417184998557 34.0 30.0 35.0 2.0 35.0 102-103 28.156262958297248 33.5 28.0 34.5 2.0 35.0 104-105 28.78906647770517 34.0 29.5 35.0 2.0 35.0 106-107 28.89114800671863 34.0 30.0 35.0 2.0 35.0 108-109 28.838257158229013 34.0 30.0 35.0 2.0 35.0 110-111 28.761365574889115 34.0 30.0 35.0 2.0 35.0 112-113 28.667010799674564 34.0 30.0 35.0 2.0 35.0 114-115 28.54174277615936 34.0 29.0 35.0 2.0 35.0 116-117 28.411217948717947 34.0 29.0 35.0 2.0 35.0 118-119 28.41313512059418 34.0 29.5 35.0 2.0 35.0 120-121 28.60035987979949 34.0 30.0 35.0 2.0 35.0 122-123 28.46462253628323 34.0 30.0 35.0 2.0 35.0 124-125 27.8489817074771 34.0 28.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65483.0 3 8954.0 4 5738.0 5 4826.0 6 4950.0 7 5631.0 8 5698.0 9 6232.0 10 6642.0 11 6934.0 12 6823.0 13 6612.0 14 6598.0 15 6133.0 16 5417.0 17 5125.0 18 4833.0 19 4730.0 20 4650.0 21 4704.0 22 5459.0 23 6966.0 24 9223.0 25 11694.0 26 13102.0 27 15453.0 28 18419.0 29 21962.0 30 27020.0 31 33741.0 32 44225.0 33 60134.0 34 92017.0 35 151405.0 36 304166.0 37 434766.0 38 97603.0 39 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.91431383807727 17.432269707161023 11.839947502255763 25.813468952505946 2 16.584971180194653 19.14161338414858 38.00008136739215 26.27333406826462 3 20.4123467807554 22.294876505945037 27.97967138245098 29.313105330848575 4 13.827984069998564 14.135415511474706 34.08551778082402 37.95108263770271 5 14.76718633426663 37.35609293255126 32.97980888288417 14.896911850297936 6 35.77788672503877 33.23304934851507 15.85865208611034 15.13041184033582 7 30.88498548472615 31.121350839156065 19.02970775215367 18.96395592396411 8 27.903433251089293 35.22743976061736 18.202727177279648 18.6663998110137 9 27.311083449858366 15.724087971532677 17.68964818079873 39.275180397810225 10-11 26.944411180427853 25.239361483987068 26.056715786227386 21.759511549357693 12-13 26.415539413321927 22.362906297581763 26.52551161515766 24.696042673938656 14-15 23.729160542560788 23.956649204216184 23.363879498593203 28.950310754629825 16-17 24.50466026488545 27.23133351486659 24.07377030356516 24.1902359166828 18-19 24.635226757496085 26.511634621125975 25.434227301448985 23.418911319928952 20-21 25.061735483098403 25.423962914420038 25.36264572674318 24.151655875738374 22-23 25.0661316859602 24.91761220569636 25.29119102649696 24.72506508184647 24-25 24.630890472326996 25.36869943331521 25.273295081918807 24.727115012438983 26-27 24.54164264907502 25.576413997775017 25.382851620002278 24.499091733147687 28-29 24.527479838888265 25.8707556352854 25.34169971762469 24.260064808201644 30-31 24.89094788726295 25.552543827532315 25.19474528917182 24.36176299603292 32-33 24.503447488464627 25.475752095789524 25.348685833670164 24.672114582075686 34-35 24.51185571762418 25.70600681162839 25.510338996785787 24.27179847396165 36-37 24.537020784893592 25.793438452561666 25.339702909845734 24.329837852699004 38-39 24.648626197328376 25.793133676898826 25.43870872916199 24.119531396610803 40-41 24.576316228066148 25.669449230781343 25.36259509427079 24.391639446881722 42-43 24.4087156736852 25.5540143030276 25.454441661586873 24.582828361700326 44-45 24.323571512231997 25.660368939817214 25.533434535278676 24.482625012672116 46-47 24.42048162017768 25.666461720979463 25.391261439611124 24.521795219231734 48-49 24.207948614223803 25.788721336560368 25.524449943126697 24.478880106089136 50-51 24.284080936328667 25.71783830778442 25.52916184805164 24.468918907835274 52-53 24.383999286110082 25.756006468315068 25.531406727297007 24.328587518277843 54-55 24.171243348228053 25.479386888709538 25.55582895349829 24.793540809564117 56-57 24.349241688295457 25.60395745304904 25.407698962703996 24.639101895951505 58-59 24.350262152329517 25.81641889517745 25.518161360902113 24.315157591590918 60-61 24.578663619521546 25.55097455824105 25.50934205221025 24.361019770027152 62-63 24.42767175096684 25.61360018582214 25.596474628585376 24.362253434625647 64-65 24.31255730944558 25.38835914958114 25.685949979413707 24.61313356155957 66-67 24.276187604797826 25.894753211066057 25.334869137842176 24.494190046293944 68-69 24.258370835415263 25.604640076796564 25.52760729554243 24.60938179224574 70-71 24.195156998927203 25.497964312311566 25.6719737804738 24.63490490828743 72-73 24.347908247526178 25.748971331124753 25.381104512495266 24.522015908853803 74-75 24.088105137213592 25.716151963285043 25.595192595068912 24.600550304432453 76-77 24.098835015796674 25.472866792865084 25.623189451824246 24.805108739513994 78-79 24.101676131973864 25.46735740280413 25.681913843450566 24.74905262177144 80-81 24.170570401906204 25.780957558177107 25.412930929557575 24.635541110359107 82-83 24.137312218471237 25.802190880190544 25.484778992746275 24.575717908591937 84-85 24.314714899941436 25.727854486518055 25.397306071427984 24.560124542112526 86-87 24.00093962052323 25.825620997631592 25.569325064410265 24.604114317434913 88-89 24.118986558551548 25.53675081829423 25.57405263394452 24.770209989209704 90-91 24.196571430071195 25.434689820815837 25.62628502476795 24.742453724345026 92-93 24.208513260179306 25.747785923744043 25.583054844524177 24.460645971552474 94-95 24.198065837127306 25.4895199762995 25.609006714813503 24.703407471759693 96-97 23.935639511974742 25.5420270036618 25.687107790562663 24.835225693800798 98-99 24.041671355470612 25.551657605655564 25.60785763708559 24.79881340178823 100-101 23.901562636873035 25.547172250293553 25.729423564192654 24.821841548640762 102-103 23.810342434900885 25.579684017790854 25.790472241077424 24.819501306230833 104-105 23.86539304433182 25.596928451260194 25.75427216394191 24.783406340466072 106-107 23.76971973655072 25.514849779775428 25.86281280501308 24.85261767866077 108-109 23.64494799605517 25.519530924483224 25.93333810142787 24.90218297803374 110-111 23.66301291662429 25.79023690867156 25.74722523876234 24.79952493594181 112-113 23.64737558860573 25.838220815440998 25.728283224954097 24.78612037099918 114-115 23.689961166902272 25.815562305682782 25.751031847601823 24.74344467981312 116-117 23.46981357265601 25.601363183929443 25.97394885698182 24.954874386432724 118-119 23.625410442329752 25.586826152516146 25.8383242485369 24.949439156617203 120-121 23.377351575821145 25.762368421829695 26.02139897496738 24.838881027381777 122-123 23.438545704590013 25.776593538972715 25.913954013274786 24.870906743162486 124-125 23.387003382003698 25.66494313188174 25.906233627595103 25.04181985851946 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 322.0 1 262.0 2 178.5 3 133.5 4 109.0 5 105.0 6 106.0 7 119.5 8 128.0 9 156.0 10 175.0 11 180.5 12 197.5 13 202.5 14 230.0 15 270.0 16 301.0 17 333.0 18 379.5 19 436.5 20 494.5 21 551.5 22 667.0 23 891.5 24 1130.5 25 1487.0 26 2021.0 27 2685.5 28 3544.5 29 4608.5 30 5878.0 31 7437.0 32 9430.0 33 11707.5 34 14227.0 35 16987.5 36 20552.0 37 24072.5 38 26949.5 39 30128.0 40 33648.5 41 36604.0 42 39648.0 43 44698.0 44 50206.5 45 55742.5 46 59336.5 47 61874.0 48 66286.5 49 68982.5 50 69576.5 51 70485.5 52 70442.0 53 69302.0 54 69123.0 55 68025.0 56 63979.5 57 58116.0 58 53296.5 59 48883.5 60 41576.5 61 33461.5 62 26851.5 63 20620.0 64 14852.5 65 10776.5 66 7843.0 67 5613.0 68 4161.0 69 2992.0 70 2170.5 71 1621.0 72 1155.0 73 809.5 74 573.5 75 368.0 76 244.5 77 156.5 78 99.0 79 77.5 80 53.5 81 36.5 82 26.0 83 19.5 84 19.5 85 12.0 86 6.5 87 10.5 88 9.5 89 5.0 90 2.0 91 1.0 92 5.0 93 4.5 94 1.0 95 1.5 96 1.5 97 1.5 98 2.0 99 1.5 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016074849749363566 2 0.011022754113849304 3 0.01049786106080886 4 0.013319161220901241 5 0.008726347006797365 6 0.029328399338634754 7 0.013647219379051518 8 0.013122326326011076 9 0.008332677217017033 10-11 0.0077093667165315065 12-13 0.0064627457155604535 14-15 0.005773823583444873 16-17 0.0042647560559536 18-19 0.005970658478335039 20-21 0.005084901451329292 22-23 0.005084901451329292 24-25 0.005281736346219458 26-27 0.0041663386085085165 28-29 0.005544182872739679 30-31 0.005117707267144319 32-33 0.007348502742566202 34-35 0.007118862031861009 36-37 0.006856415505340788 38-39 0.0066923864262656485 40-41 0.00695483295278587 42-43 0.007020444584415924 44-45 0.006856415505340788 46-47 0.009120016796577698 48-49 0.007774978348161562 50-51 0.0054129596094795685 52-53 0.004953678188069181 54-55 0.005905046846704984 56-57 0.0071844736634910636 58-59 0.006659580610450621 60-61 0.004625620029918904 62-63 0.005380153793664541 64-65 0.00311655250242763 66-67 0.003575833923838018 68-69 0.006134687557410178 70-71 0.0042647560559536 72-73 0.004133532792693489 74-75 0.003575833923838018 76-77 0.0042647560559536 78-79 0.0029853292391675197 80-81 0.0029853292391675197 82-83 0.0049208723722541535 84-85 0.009021599349132613 86-87 0.006593968978820565 88-89 0.004297561871768627 90-91 0.00482245492480907 92-93 0.0079390074272367 94-95 0.006659580610450621 96-97 0.009284045875652836 98-99 0.00652835734719051 100-101 0.00823425976957195 102-103 0.0051505130829593475 104-105 0.004461590950843766 106-107 0.007053250400230953 108-109 0.006626774794635593 110-111 0.007545337637456369 112-113 0.00482245492480907 114-115 0.0021979896596068553 116-117 0.0026900768968322704 118-119 0.15999396372989003 120-121 0.011055559929664331 122-123 0.0018371256856415505 124-125 0.0015418733433063014 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1524120.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.23238807741043 #Duplication Level Percentage of deduplicated Percentage of total 1 80.05634402178264 49.020411252004706 2 10.939290839327109 13.396778039306767 3 3.593895559242017 6.601884227795675 4 1.6716221729803638 4.094296704589509 5 0.9519313716989399 2.9144515587465563 6 0.5987077759864584 2.1996184130499676 7 0.42194188318451975 1.8085556396087523 8 0.31143808975188775 1.5256078379019977 9 0.23032022010562964 1.2692751389624253 >10 1.1487371663984949 12.17397862542248 >50 0.051996507392568184 2.167955297106041 >100 0.022703539202203523 2.3608471439274825 >500 0.0010708529471946447 0.46634012157771204 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.561163163005538E-5 2 0.0 0.0 0.0 0.0 6.561163163005538E-5 3 0.0 0.0 0.0 0.0 6.561163163005538E-5 4 0.0 0.0 0.0 0.0 1.3122326326011076E-4 5 0.0 0.0 0.0 0.0 1.3122326326011076E-4 6 0.0 0.0 0.0 0.0 1.3122326326011076E-4 7 0.0 0.0 0.0 0.0 1.3122326326011076E-4 8 0.0 0.0 0.0 0.0 1.3122326326011076E-4 9 0.0 0.0 0.0 0.0 2.624465265202215E-4 10-11 0.0 0.0 0.0 0.0 2.624465265202215E-4 12-13 0.0 0.0 0.0 6.561163163005538E-5 2.624465265202215E-4 14-15 0.0 0.0 0.0 6.561163163005538E-5 3.6086397396530457E-4 16-17 0.0 0.0 0.0 9.841744744508308E-5 4.592814214103876E-4 18-19 0.0 0.0 0.0 1.3122326326011076E-4 5.905046846704984E-4 20-21 0.0 0.0 0.0 1.9683489489016615E-4 5.905046846704984E-4 22-23 0.0 0.0 0.0 3.6086397396530457E-4 7.217279479306091E-4 24-25 0.0 0.0 0.0 4.920872372254153E-4 8.857570270057475E-4 26-27 0.0 0.0 0.0 0.0010825919218959137 9.185628428207752E-4 28-29 0.0 0.0 0.0 0.003378999028947852 9.51368658635803E-4 30-31 0.0 0.0 0.0 0.01322074377345616 0.0010169802902658585 32-33 0.0 0.0 0.0 0.027819331811143478 0.0011810093693409968 34-35 6.561163163005538E-5 0.0 0.0 0.044812744403327824 0.0013122326326011075 36-37 6.561163163005538E-5 0.0 0.0 0.06925307718552345 0.0013122326326011075 38-39 6.561163163005538E-5 0.0 0.0 0.11235991916646984 0.0013122326326011075 40-41 6.561163163005538E-5 0.0 0.0 0.16065008004619058 0.0013122326326011075 42-43 6.561163163005538E-5 0.0 0.0 0.20762800829331024 0.0013122326326011075 44-45 6.561163163005538E-5 0.0 0.0 0.2593299740177939 0.0013122326326011075 46-47 6.561163163005538E-5 0.0 0.0 0.31614964700942183 0.0013122326326011075 48-49 6.561163163005538E-5 0.0 0.0 0.37670918300396294 0.0014434558958612183 50-51 6.561163163005538E-5 0.0 0.0 0.44199275647586805 0.0014434558958612183 52-53 6.561163163005538E-5 0.0 0.0 0.5037661076555652 0.001574679159121329 54-55 6.561163163005538E-5 0.0 0.0 0.571050835892187 0.0017059024223814397 56-57 6.561163163005538E-5 0.0 0.0 0.6505721334278141 0.001771514054011495 58-59 6.561163163005538E-5 0.0 0.0 0.7313400519644122 0.001869931501456578 60-61 6.561163163005538E-5 0.0 0.0 0.8206374826129177 0.001902737317271606 62-63 6.561163163005538E-5 0.0 0.0 0.9117392331312495 0.0020339605805317165 64-65 6.561163163005538E-5 0.0 0.0 1.0031034301761017 0.0020667663963467443 66-67 6.561163163005538E-5 0.0 0.0 1.1164803296328372 0.002099572212161772 68-69 6.561163163005538E-5 0.0 0.0 1.2373697609112144 0.002099572212161772 70-71 6.561163163005538E-5 0.0 0.0 1.3719064115686428 0.0022307954754218827 72-73 6.561163163005538E-5 0.0 0.0 1.4972246279820487 0.0023620187386819936 74-75 6.561163163005538E-5 0.0 0.0 1.631531637928772 0.0023620187386819936 76-77 6.561163163005538E-5 0.0 0.0 1.7806012649922578 0.0023948245544970215 78-79 6.561163163005538E-5 0.0 0.0 1.9550297876807599 0.002427630370312049 80-81 6.561163163005538E-5 0.0 0.0 2.1367083956643835 0.0024604361861270763 82-83 6.561163163005538E-5 0.0 0.0 2.324718526100307 0.00255885363357216 84-85 6.561163163005538E-5 0.0 0.0 2.5262118468362074 0.00255885363357216 86-87 6.561163163005538E-5 0.0 0.0 2.7353489226570087 0.00255885363357216 88-89 6.561163163005538E-5 0.0 0.0 2.971747631420098 0.002624465265202215 90-91 6.561163163005538E-5 0.0 0.0 3.2289780332257303 0.002624465265202215 92-93 6.561163163005538E-5 0.0 0.0 3.4907684434296513 0.0026572710810172425 94-95 6.561163163005538E-5 0.0 0.0 3.762695850720416 0.0027556885284623256 96-97 6.561163163005538E-5 0.0 0.0 4.046794215678555 0.0027556885284623256 98-99 6.561163163005538E-5 0.0 0.0 4.364780988373619 0.0027556885284623256 100-101 6.561163163005538E-5 0.0 0.0 4.71498307219904 0.0027556885284623256 102-103 6.561163163005538E-5 0.0 0.0 5.08880534341128 0.0027884943442773535 104-105 6.561163163005538E-5 0.0 0.0 5.468532661470226 0.0028541059759074087 106-107 6.561163163005538E-5 0.0 0.0 5.868533973702858 0.0029197176075374644 108-109 6.561163163005538E-5 0.0 0.0 6.287726688187282 0.0030837466866126028 110-111 6.561163163005538E-5 0.0 0.0 6.746056740939034 0.0033789990289478516 112-113 6.561163163005538E-5 0.0 0.0 7.220527255071779 0.0034774164763929348 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1990 0.0 50.538124 1 GGTATCA 1285 0.0 48.626347 1 TCAACGC 2340 0.0 40.690178 4 CAACGCA 2400 0.0 39.671623 5 AACGCAG 2575 0.0 36.973064 6 GTACATG 6730 0.0 34.662228 1 TATCAAC 2825 0.0 33.91508 2 ATCAACG 2880 0.0 33.47403 3 CGTATAC 110 2.0380043E-5 32.459663 3 TACATGG 7070 0.0 31.901072 2 ACATGGG 7210 0.0 30.621336 3 TATCTCG 190 3.715104E-8 28.187733 5 CATGGGG 6850 0.0 28.147507 4 GAGTACA 4810 0.0 27.713312 1 ACGCAGA 3400 0.0 27.47122 7 AGTACAT 4735 0.0 27.146837 2 CGCAGAG 3615 0.0 26.001955 8 TATACCG 170 1.3977984E-5 24.503061 5 ATGGGGG 3905 0.0 23.46772 5 GTATCGC 130 0.0020517576 22.885971 6 >>END_MODULE