##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921303_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1360973 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.49112730377458 31.0 31.0 34.0 27.0 34.0 2 30.636523281505216 31.0 31.0 34.0 27.0 34.0 3 30.877011520434277 33.0 31.0 34.0 27.0 34.0 4 34.2483407091838 37.0 35.0 37.0 31.0 37.0 5 34.43049421259643 37.0 35.0 37.0 32.0 37.0 6 34.42347129590374 37.0 35.0 37.0 31.0 37.0 7 34.31672119873061 37.0 35.0 37.0 31.0 37.0 8 34.39427159833443 37.0 35.0 37.0 31.0 37.0 9 35.99179998427596 39.0 37.0 39.0 31.0 39.0 10-11 36.02797961458457 39.0 37.0 39.0 31.5 39.0 12-13 35.96721830631468 39.0 37.0 39.0 31.0 39.0 14-15 37.31409734065261 41.0 38.0 41.0 31.0 41.0 16-17 37.31913858687865 41.0 38.0 41.0 31.0 41.0 18-19 37.31646145808918 41.0 38.0 41.0 31.0 41.0 20-21 37.353244700666366 41.0 38.0 41.0 31.0 41.0 22-23 37.32340575455942 41.0 38.0 41.0 31.0 41.0 24-25 37.324255881637626 41.0 38.0 41.0 31.0 41.0 26-27 37.30745025801394 41.0 38.0 41.0 31.0 41.0 28-29 37.251630634847274 41.0 38.0 41.0 30.0 41.0 30-31 37.17896901701944 41.0 38.0 41.0 30.0 41.0 32-33 37.10219490026621 41.0 38.0 41.0 30.0 41.0 34-35 36.99931152197729 40.0 38.0 41.0 30.0 41.0 36-37 36.89333954457583 40.0 38.0 41.0 30.0 41.0 38-39 36.796482369598806 40.0 38.0 41.0 30.0 41.0 40-41 36.69724674920076 40.0 37.5 41.0 30.0 41.0 42-43 36.510646427225225 40.0 37.0 41.0 29.5 41.0 44-45 36.2826213304746 40.0 36.5 41.0 29.0 41.0 46-47 36.0781672377042 40.0 36.0 41.0 28.0 41.0 48-49 35.88230589438585 40.0 36.0 41.0 28.0 41.0 50-51 35.714973405056526 40.0 35.0 41.0 28.0 41.0 52-53 35.534176651557374 39.0 35.0 41.0 27.0 41.0 54-55 35.33246287766179 39.0 35.0 41.0 27.0 41.0 56-57 35.09586964620165 39.0 35.0 41.0 26.5 41.0 58-59 34.83120238241317 38.5 35.0 40.0 26.0 41.0 60-61 34.55063509709598 38.0 34.5 40.0 26.0 41.0 62-63 34.21658989561145 37.0 34.0 40.0 25.5 41.0 64-65 33.868038160933395 37.0 34.0 40.0 24.5 41.0 66-67 33.52201843827908 36.0 34.0 39.0 23.5 41.0 68-69 33.15958766265018 36.0 33.5 39.0 23.0 40.5 70-71 33.095847970532844 35.5 34.0 39.0 24.0 40.0 72-73 32.79907463263415 35.0 34.0 37.5 23.5 40.0 74-75 32.46577522111019 35.0 33.5 37.0 23.0 39.0 76-77 32.162149800179726 35.0 33.0 37.0 22.0 39.0 78-79 31.86734490691586 35.0 33.0 36.0 21.5 38.5 80-81 31.587935616650732 35.0 33.0 36.0 20.0 37.0 82-83 31.357779324057127 35.0 33.0 35.0 20.0 37.0 84-85 31.136010413138248 35.0 33.0 35.0 19.5 36.5 86-87 30.965710928872213 35.0 33.0 35.0 18.0 36.0 88-89 30.816224127884976 35.0 33.0 35.0 18.0 36.0 90-91 30.692162519021316 35.0 33.0 35.0 17.0 36.0 92-93 30.575928765669858 35.0 32.0 35.0 15.0 35.0 94-95 30.449692242241397 35.0 32.0 35.0 10.5 35.0 96-97 30.355880315039315 35.0 32.0 35.0 8.5 35.0 98-99 30.273189475470858 35.0 32.0 35.0 7.0 35.0 100-101 30.179060863073698 35.0 32.0 35.0 6.0 35.0 102-103 29.3630865564563 34.0 30.5 35.0 2.0 35.0 104-105 29.93974751887069 34.5 31.5 35.0 2.0 35.0 106-107 30.009784543852085 35.0 32.0 35.0 2.0 35.0 108-109 29.94576490496138 35.0 32.0 35.0 2.0 35.0 110-111 29.868714515276938 35.0 31.5 35.0 2.0 35.0 112-113 29.780405636261705 35.0 31.0 35.0 2.0 35.0 114-115 29.651567665192474 35.0 31.0 35.0 2.0 35.0 116-117 29.514697940370603 35.0 31.0 35.0 2.0 35.0 118-119 29.505903864367625 34.5 31.5 35.0 2.0 35.0 120-121 29.66663225501167 35.0 32.0 35.0 2.0 35.0 122-123 29.526669522466648 35.0 32.0 35.0 2.0 35.0 124-125 28.960865131049623 34.5 30.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 39720.0 3 5954.0 4 3853.0 5 3344.0 6 3759.0 7 4257.0 8 4071.0 9 4426.0 10 4988.0 11 5865.0 12 6006.0 13 6006.0 14 5979.0 15 5061.0 16 3951.0 17 3562.0 18 3371.0 19 3398.0 20 3277.0 21 3485.0 22 3900.0 23 5437.0 24 8200.0 25 10075.0 26 10093.0 27 10920.0 28 13042.0 29 15959.0 30 19123.0 31 24034.0 32 31485.0 33 43458.0 34 70277.0 35 116815.0 36 249361.0 37 460243.0 38 144075.0 39 143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.370849246774014 18.35565318167154 12.448456619783105 24.825040951771342 2 16.620738813812157 19.636104436263164 39.15316387792744 24.58999287199724 3 20.137944819132972 23.92804706525557 28.244811637569313 27.689196478042145 4 13.752724472264394 15.153283255463274 34.89823002996736 36.19576224230497 5 14.463887860136737 38.28883245448507 32.73327689892951 14.514002786448687 6 33.99273397575591 34.42666688226115 16.958221463068295 14.622377678914638 7 30.243379431318555 32.26903057546423 19.242032426585304 18.245557566631906 8 27.449500590825448 35.46165219487246 18.736956278916644 18.35189093538545 9 28.02591907563723 16.42832315955237 18.260852951572215 37.284904813238185 10-11 26.664055576538985 26.0943798856901 26.045513799341887 21.196050738429026 12-13 26.251024616891566 23.450252025443934 26.481574899081433 23.817148458583066 14-15 23.896590783420635 24.84248295869341 23.849452323103097 27.411473934782855 16-17 24.17319663988055 27.757615526150264 24.527850605185964 23.54133722878322 18-19 24.137041654128875 27.126675976781296 25.99902783885933 22.7372545302305 20-21 25.101688631999025 25.821435827685395 25.892638995895712 23.184236544419864 22-23 24.984219897111526 25.395678272543503 25.68681106716115 23.933290763183827 24-25 24.43524698127869 25.600263064592276 25.785400282537253 24.17908967159178 26-27 23.950725418278797 26.058331058498226 25.90865119484872 24.082292328374255 28-29 24.060782706490393 26.513973857366608 25.72411758416702 23.70112585197598 30-31 24.85582072059329 25.80516095136096 25.761219199900065 23.577799128145685 32-33 24.51481084401713 25.829603464277394 25.660923488879465 23.994662202826007 34-35 24.395859970900755 26.202879061769764 25.886167570506885 23.515093396822596 36-37 24.311551271523495 26.22143595904818 25.86331880216112 23.603693967267205 38-39 24.347228003860767 26.35487825981845 25.8145986812108 23.483295055109988 40-41 24.405629476677646 25.929321078940166 25.87086593343609 23.7941835109461 42-43 24.06242640258982 25.931198982413044 25.753444588429502 24.252930026567633 44-45 23.84274848818527 26.026838087113006 26.07452836046498 24.05588506423674 46-47 23.885166725759962 25.97956780450346 25.831350799229153 24.303914670507424 48-49 23.750005970504606 26.28282261943122 25.90949155917615 24.057679850888025 50-51 23.959955661417535 26.13173056044512 26.00049305914542 23.907820718991925 52-53 24.02905451579481 26.10493867983452 25.880783898772126 23.98522290559854 54-55 23.687913609222228 25.80965635622675 26.19741844651205 24.30501158803897 56-57 23.838587956924457 26.08726802438155 25.67943918022728 24.394704838466712 58-59 23.80033500640583 26.241788797529814 25.991470894159946 23.96640530190441 60-61 24.37509690342577 26.191186509426544 25.909202133014325 23.524514454133357 62-63 24.11339961120931 26.110443449912978 25.981189467306788 23.79496747157092 64-65 23.906677904154613 25.847202005112713 25.928654198149637 24.317465892583037 66-67 24.006495629778495 26.146967297737184 25.6570763052799 24.18946076720442 68-69 23.78226369715672 26.104445263361708 25.983640678372122 24.129650361109448 70-71 23.779300462928944 26.023513851127927 26.10742890734073 24.089756778602396 72-73 23.867786752589723 26.46781651214355 25.632932436627765 24.03146429863896 74-75 23.76248609390454 26.447997448773396 25.776867605153598 24.012648852168468 76-77 23.680913569215754 25.927471739373242 25.883273177241012 24.50834151416999 78-79 23.675103927284884 26.06090331777409 25.97445492136796 24.28953783357306 80-81 23.96173787298079 26.43155993557337 25.605065073244138 24.001637118201696 82-83 24.10522676528844 26.28280988280092 25.816644187496486 23.79531916441416 84-85 24.000465886490506 26.346579132914698 25.557327736816752 24.095627243778043 86-87 23.614910766576358 26.6312187286212 25.632555374543763 24.12131513025868 88-89 23.609568524347317 26.22835117508677 25.852129418814542 24.309950881751373 90-91 24.048898666760724 25.912119662340103 25.94632506819037 24.092656602708804 92-93 24.13388186043128 26.085373439447878 25.828880561616895 23.95186413850395 94-95 24.08083514314572 26.04391974683814 25.734411517350868 24.140833592665274 96-97 23.699961200549073 26.01532578311695 25.86064236606106 24.42407065027292 98-99 23.5102199178174 26.025886343462133 25.77123344443857 24.6926602942819 100-101 23.53568376398108 26.392964139509147 25.795913898374334 24.27543819813544 102-103 23.510777833705024 26.308017885288727 25.90732569375301 24.273878587253243 104-105 23.659040466220713 26.327971809842087 25.701989234334178 24.310998489603026 106-107 23.6288750700383 26.14893128438766 25.891043364043025 24.331150281531013 108-109 23.532798431595012 26.24216220029349 25.828640879788196 24.396398488323303 110-111 23.40983141567624 26.811204956858226 25.70418602327054 24.07477760419499 112-113 23.343326793495432 26.92682729684251 25.79154082989808 23.93830507976398 114-115 23.437589551942697 26.95577768927699 25.634009384676204 23.972623374104113 116-117 23.306672642972085 26.878347894454528 25.67218740126237 24.142792061311017 118-119 23.280204645289103 26.622101661786274 25.801069883922967 24.296623809001655 120-121 23.238824418146653 26.74563352792132 25.936197480350142 24.07934457358189 122-123 23.25319437142552 26.947088739948644 25.73940160116272 24.06031528746312 124-125 23.18839461569068 26.81279939924516 25.644538447097236 24.35426753796692 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 495.0 1 446.0 2 356.0 3 267.5 4 200.0 5 171.5 6 167.0 7 216.0 8 267.5 9 293.0 10 303.0 11 294.5 12 314.5 13 358.5 14 392.5 15 430.0 16 474.0 17 546.0 18 624.5 19 651.0 20 702.5 21 793.5 22 929.0 23 1174.5 24 1455.0 25 1774.5 26 2388.0 27 3340.0 28 4184.0 29 5416.5 30 7199.0 31 9058.5 32 11690.0 33 14737.5 34 17521.0 35 20361.0 36 23940.0 37 27235.5 38 29258.5 39 31557.0 40 33878.5 41 35584.0 42 37567.5 43 40588.0 44 43930.5 45 47111.0 46 49938.5 47 52507.5 48 55893.5 49 59156.5 50 61001.0 51 61300.5 52 59972.0 53 58771.0 54 57943.5 55 55822.5 56 52735.5 57 48202.5 58 42959.5 59 37862.0 60 32196.5 61 26851.0 62 21920.5 63 16652.0 64 12282.0 65 9232.5 66 6846.5 67 5111.0 68 3843.0 69 2923.5 70 2257.5 71 1729.5 72 1287.5 73 957.0 74 722.0 75 529.5 76 369.0 77 240.0 78 150.5 79 101.5 80 74.0 81 51.5 82 42.0 83 29.0 84 20.5 85 20.0 86 15.0 87 9.5 88 10.5 89 8.0 90 5.0 91 3.5 92 3.5 93 3.0 94 3.0 95 3.5 96 2.0 97 0.5 98 1.0 99 1.5 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016605766609624144 2 0.010507188606974568 3 0.010213281233352902 4 0.011682818101461235 5 0.007421161183947073 6 0.028949876301734127 7 0.012931924439353317 8 0.012123679161893733 9 0.008964174895460822 10-11 0.008155929618001238 12-13 0.007237469075433532 14-15 0.006502700641379366 16-17 0.005069902194973743 18-19 0.0064292237979739495 20-21 0.0057679322073252 22-23 0.006025101159244158 24-25 0.0066496543281901995 26-27 0.005033163773271034 28-29 0.006796608015001032 30-31 0.005914885894136033 32-33 0.008229406461406654 34-35 0.008302883304812072 36-37 0.007751806979271448 38-39 0.007604853292460616 40-41 0.007384422762244365 42-43 0.007825283822676865 44-45 0.007972237509487697 46-47 0.009588728064406863 48-49 0.00856005225673103 50-51 0.00598836273754145 52-53 0.006098578002649575 54-55 0.006392485376271241 56-57 0.00793549908778499 58-59 0.007604853292460616 60-61 0.006025101159244158 62-63 0.006355746954568533 64-65 0.003820795857081662 66-67 0.004261656917514161 68-69 0.007163992232028116 70-71 0.005363809568595409 72-73 0.004812733243054785 74-75 0.004335133760919577 76-77 0.005069902194973743 78-79 0.0033431963749464538 80-81 0.0033064579532437453 82-83 0.0061353164243522825 84-85 0.009294820690785195 86-87 0.007641591714163324 88-89 0.005400547990298117 90-91 0.005657716942217075 92-93 0.00856005225673103 94-95 0.007678330135866032 96-97 0.009478512799298736 98-99 0.007421161183947073 100-101 0.008523313835028322 102-103 0.005731193785622492 104-105 0.005327071146892701 106-107 0.00811919119629853 108-109 0.007347684340541657 110-111 0.008155929618001238 112-113 0.006098578002649575 114-115 0.0022777821455679135 116-117 0.0031595042664329127 118-119 0.15679958382715894 120-121 0.010948049667407068 122-123 0.001800182663432706 124-125 0.0013593216030002063 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1360973.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.95971508669929 #Duplication Level Percentage of deduplicated Percentage of total 1 83.2185212856436 54.89069953937473 2 9.502539679766503 12.535696197549065 3 2.8866635689969833 5.712105196865866 4 1.2936198785259971 3.413071944722613 5 0.7663664775200055 2.5274657254608446 6 0.49347485915774436 1.9529676667496325 7 0.34470559038259063 1.5915677771299703 8 0.24888309897393202 1.3133006638572269 9 0.19269533647877796 1.143911654340826 >10 0.9969481239873098 11.536689975298327 >50 0.04354980902636033 1.9135658991724158 >100 0.011586667891235821 1.224479744237578 >500 2.2281182451456698E-4 0.08986973629080763 >1k 2.2281182451456698E-4 0.1546082789500076 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.347684340541656E-5 0.0 2 0.0 0.0 0.0 7.347684340541656E-5 0.0 3 0.0 0.0 0.0 7.347684340541656E-5 0.0 4 0.0 0.0 0.0 1.4695368681083313E-4 0.0 5 0.0 0.0 0.0 1.4695368681083313E-4 0.0 6 0.0 0.0 0.0 1.4695368681083313E-4 0.0 7 0.0 0.0 0.0 1.4695368681083313E-4 0.0 8 0.0 0.0 0.0 1.4695368681083313E-4 0.0 9 0.0 0.0 0.0 1.4695368681083313E-4 0.0 10-11 0.0 0.0 0.0 2.204305302162497E-4 0.0 12-13 0.0 0.0 0.0 2.204305302162497E-4 1.4695368681083313E-4 14-15 0.0 0.0 0.0 2.9390737362166626E-4 2.204305302162497E-4 16-17 0.0 0.0 0.0 3.6738421702708283E-4 2.204305302162497E-4 18-19 0.0 0.0 0.0 3.6738421702708283E-4 3.6738421702708283E-4 20-21 0.0 0.0 0.0 4.041226387297911E-4 5.510763255406242E-4 22-23 0.0 0.0 0.0 5.14337903837916E-4 6.612915906487491E-4 24-25 3.673842170270828E-5 0.0 0.0 9.184605425677071E-4 7.347684340541657E-4 26-27 7.347684340541656E-5 0.0 0.0 0.0016164905549191644 8.817221208649988E-4 28-29 7.347684340541656E-5 0.0 0.0 0.005731193785622492 8.817221208649988E-4 30-31 7.347684340541656E-5 0.0 0.0 0.021418499852678928 8.817221208649988E-4 32-33 7.347684340541656E-5 0.0 0.0 0.050515329841223894 8.817221208649988E-4 34-35 7.347684340541656E-5 0.0 0.0 0.08593116836263467 9.551989642704153E-4 36-37 7.347684340541656E-5 0.0 0.0 0.13975295615710231 0.001028675807675832 38-39 7.347684340541656E-5 0.0 0.0 0.21896099334814137 0.001028675807675832 40-41 7.347684340541656E-5 0.0 0.0 0.3095946796887227 0.001028675807675832 42-43 7.347684340541656E-5 0.0 0.0 0.39773015335351986 0.001028675807675832 44-45 7.347684340541656E-5 0.0 0.0 0.49152334396053415 0.0011021526510812485 46-47 7.347684340541656E-5 0.0 0.0 0.5956400310660094 0.0012123679161893733 48-49 7.347684340541656E-5 0.0 0.0 0.7045694514145395 0.0013225831812974983 50-51 7.347684340541656E-5 0.0 0.0 0.8159970844388537 0.0013960600247029148 52-53 7.347684340541656E-5 0.0 0.0 0.9296290227653303 0.0014695368681083313 54-55 7.347684340541656E-5 0.0 0.0 1.0588013134720526 0.0015430137115137479 56-57 7.347684340541656E-5 0.0 0.0 1.1956151958929384 0.0015430137115137479 58-59 7.347684340541656E-5 0.0 0.0 1.3386746100032845 0.0015430137115137479 60-61 7.347684340541656E-5 0.0 0.0 1.4852976510187932 0.0015430137115137479 62-63 7.347684340541656E-5 0.0 0.0 1.6407746516646546 0.0015430137115137479 64-65 7.347684340541656E-5 0.0 0.0 1.7904102432597855 0.0015430137115137479 66-67 7.347684340541656E-5 0.0 0.0 1.9687018037830288 0.0015797521332164561 68-69 7.347684340541656E-5 0.0 0.0 2.1552595091893814 0.0016164905549191644 70-71 7.347684340541656E-5 0.0 0.0 2.356181937481493 0.0018369210851354142 72-73 7.347684340541656E-5 0.0 0.0 2.545862408732576 0.0020940900370543724 74-75 7.347684340541656E-5 0.0 0.0 2.746895052289796 0.0021308284587570805 76-77 7.347684340541656E-5 0.0 0.0 2.986980638116994 0.0021675668804597885 78-79 7.347684340541656E-5 0.0 0.0 3.2509461980509533 0.0022410437238652055 80-81 7.347684340541656E-5 0.0 0.0 3.5003633429906396 0.0022777821455679135 82-83 7.347684340541656E-5 0.0 0.0 3.7531604227269755 0.00235125898897333 84-85 7.347684340541656E-5 0.0 0.0 4.016317737383475 0.00235125898897333 86-87 7.347684340541656E-5 0.0 0.0 4.311364002077925 0.0023879974106760385 88-89 7.347684340541656E-5 0.0 0.0 4.651929171262031 0.0024247358323787466 90-91 7.347684340541656E-5 0.0 0.0 4.994698645748299 0.002498212675784163 92-93 7.347684340541656E-5 0.0 0.0 5.3295693595684845 0.0026451663625949966 94-95 7.347684340541656E-5 0.0 0.0 5.669546714005348 0.0027921200494058296 96-97 7.347684340541656E-5 0.0 0.0 6.056696201908488 0.0027921200494058296 98-99 7.347684340541656E-5 0.0 0.0 6.4865357358301745 0.0027921200494058296 100-101 7.347684340541656E-5 0.0 0.0 6.937573339074325 0.0028288584711085377 102-103 7.347684340541656E-5 0.0 0.0 7.392101092380231 0.0029390737362166627 104-105 7.347684340541656E-5 0.0 0.0 7.8652184870677075 0.003012550579622079 106-107 7.347684340541656E-5 0.0 0.0 8.382385249376732 0.0030492890013247877 108-109 7.347684340541656E-5 0.0 0.0 8.930302070650924 0.0031595042664329122 110-111 7.347684340541656E-5 0.0 0.0 9.509850673011147 0.0032329811098383288 112-113 7.347684340541656E-5 0.0 0.0 10.090207520648828 0.0032329811098383288 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1620 0.0 60.601814 1 CGTAGCG 90 9.728865E-8 46.276047 3 GTATCAA 2675 0.0 44.708385 1 GTACATG 7855 0.0 37.26796 1 TCAACGC 3225 0.0 36.897846 4 CAACGCA 3315 0.0 35.894775 5 TACATGG 8125 0.0 35.80851 2 ACATGGG 8380 0.0 34.64787 3 AACGCAG 3500 0.0 34.336193 6 CATGGGG 7075 0.0 34.058796 4 ATCAACG 3510 0.0 33.901867 3 TATCAAC 3630 0.0 32.781143 2 ATGGGGG 4665 0.0 29.843449 5 TGGGGGG 3365 0.0 26.34329 6 ACGCAGA 4525 0.0 26.031515 7 GTGGTAT 940 0.0 25.319134 1 CGCAGAG 4695 0.0 25.088026 8 ATGGGGA 2440 0.0 24.139605 5 GAGTACA 5540 0.0 23.950346 1 AGTACAT 5495 0.0 23.387661 2 >>END_MODULE