##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921299_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1458853 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.59710745359539 33.0 31.0 34.0 27.0 34.0 2 30.61961074899253 33.0 31.0 34.0 27.0 34.0 3 30.77131006345396 33.0 31.0 34.0 27.0 34.0 4 34.22124984491241 37.0 35.0 37.0 31.0 37.0 5 34.21441502330941 37.0 35.0 37.0 31.0 37.0 6 34.28100363778941 37.0 35.0 37.0 31.0 37.0 7 34.161539922116894 37.0 35.0 37.0 30.0 37.0 8 34.154428170624456 37.0 35.0 37.0 30.0 37.0 9 35.760858702007674 39.0 37.0 39.0 30.0 39.0 10-11 35.80190567521197 39.0 37.0 39.0 30.5 39.0 12-13 35.75794716808342 39.0 37.0 39.0 30.0 39.0 14-15 37.090237330286186 41.0 38.0 41.0 31.0 41.0 16-17 37.07495511885022 41.0 38.0 41.0 31.0 41.0 18-19 37.05994401080849 41.0 38.0 41.0 30.5 41.0 20-21 37.09771066721596 41.0 38.0 41.0 31.0 41.0 22-23 37.043264125994874 41.0 38.0 41.0 30.0 41.0 24-25 37.02408433200603 41.0 38.0 41.0 30.0 41.0 26-27 36.99310245788986 41.0 38.0 41.0 30.0 41.0 28-29 36.93371162139023 40.0 38.0 41.0 30.0 41.0 30-31 36.86007431865993 40.0 38.0 41.0 30.0 41.0 32-33 36.79036236001845 40.0 38.0 41.0 30.0 41.0 34-35 36.68423857647069 40.0 38.0 41.0 30.0 41.0 36-37 36.573070419020965 40.0 37.5 41.0 30.0 41.0 38-39 36.47403371004481 40.0 37.0 41.0 29.0 41.0 40-41 36.37078273136498 40.0 37.0 41.0 29.0 41.0 42-43 36.17007779399295 40.0 36.5 41.0 28.0 41.0 44-45 35.915690957210906 40.0 36.0 41.0 27.5 41.0 46-47 35.69652014287937 40.0 35.5 41.0 27.0 41.0 48-49 35.48541696798787 40.0 35.0 41.0 26.0 41.0 50-51 35.308036519100966 39.0 35.0 41.0 26.0 41.0 52-53 35.11457083064572 39.0 35.0 41.0 26.0 41.0 54-55 34.898879462152806 39.0 35.0 41.0 26.0 41.0 56-57 34.64864794465241 38.5 35.0 40.0 25.0 41.0 58-59 34.369988614342915 38.0 34.0 40.0 24.0 41.0 60-61 34.07280514212192 37.5 34.0 40.0 23.0 41.0 62-63 33.740343955148326 37.0 34.0 40.0 23.0 41.0 64-65 33.380399190322805 36.5 34.0 39.0 22.0 41.0 66-67 33.02914618539359 36.0 33.0 39.0 22.0 41.0 68-69 32.67378378767429 35.0 33.0 38.5 20.5 40.0 70-71 32.615296743400464 35.0 33.0 38.0 21.5 40.0 72-73 32.325709992713456 35.0 33.0 37.0 20.5 39.5 74-75 32.001589262249176 35.0 33.0 37.0 20.0 39.0 76-77 31.71372304132082 35.0 33.0 36.0 20.0 39.0 78-79 31.438103770564958 35.0 33.0 36.0 18.5 37.5 80-81 31.17948038630349 35.0 33.0 35.5 18.0 37.0 82-83 30.973336244296032 35.0 32.5 35.0 17.0 37.0 84-85 30.772788965029378 35.0 32.0 35.0 14.5 36.0 86-87 30.61393334352399 35.0 32.0 35.0 12.0 36.0 88-89 30.48674712256821 35.0 32.0 35.0 10.0 36.0 90-91 30.378850028069998 35.0 32.0 35.0 7.5 35.0 92-93 30.26906240724734 35.0 32.0 35.0 7.0 35.0 94-95 30.15656169607219 35.0 32.0 35.0 7.0 35.0 96-97 30.072140921669284 35.0 32.0 35.0 3.5 35.0 98-99 29.99528944999942 35.0 31.5 35.0 2.0 35.0 100-101 29.909869260302443 35.0 31.0 35.0 2.0 35.0 102-103 29.069497749259178 33.5 29.5 34.5 2.0 35.0 104-105 29.676855721584012 34.0 31.0 35.0 2.0 35.0 106-107 29.764099261543144 35.0 31.0 35.0 2.0 35.0 108-109 29.702437120121083 35.0 31.0 35.0 2.0 35.0 110-111 29.628372426831216 35.0 31.0 35.0 2.0 35.0 112-113 29.542933043973587 34.0 31.0 35.0 2.0 35.0 114-115 29.421154838767166 34.0 31.0 35.0 2.0 35.0 116-117 29.297807935412273 34.0 31.0 35.0 2.0 35.0 118-119 29.30244582559038 34.5 31.0 35.0 2.0 35.0 120-121 29.47785691910014 35.0 32.0 35.0 2.0 35.0 122-123 29.354031557668936 35.0 32.0 35.0 2.0 35.0 124-125 28.787731868803778 34.5 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 49880.0 3 7243.0 4 4415.0 5 3791.0 6 3981.0 7 4532.0 8 4726.0 9 4916.0 10 5501.0 11 6052.0 12 5996.0 13 6065.0 14 5969.0 15 5290.0 16 4303.0 17 3873.0 18 3767.0 19 3639.0 20 3689.0 21 3909.0 22 4456.0 23 6036.0 24 8389.0 25 10750.0 26 11381.0 27 12795.0 28 15273.0 29 18296.0 30 22014.0 31 27734.0 32 36157.0 33 50131.0 34 79494.0 35 132986.0 36 286167.0 37 473448.0 38 121758.0 39 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.62969018985975 17.748352361814696 12.380065034831274 25.241892413494284 2 16.408636044854344 18.84892954368925 39.293825843555496 25.448608567900916 3 20.17698168620714 23.06239468232281 28.192231068869024 28.56839256260103 4 13.660935075868567 14.244423405073627 34.359928179723454 37.734713339334355 5 14.605231857858653 37.91036918058815 32.47408510355333 15.010313857999872 6 35.4897190673794 33.21960357316234 16.503934373174403 14.786742986283862 7 31.07061422211375 31.438555165090104 18.91464620219407 18.576184410602075 8 27.958216617100828 35.54597145611127 18.23378347065058 18.26202845613732 9 28.090298962782185 15.797314065167168 17.807446305297145 38.3049406667535 10-11 27.17004090908312 25.21387721105282 25.933410912630745 21.682670967233317 12-13 26.54066984497928 22.422802410709785 26.543549041107724 24.492978703203207 14-15 24.11007529064327 23.910554743214554 23.568651726447424 28.410718239694756 16-17 24.73024520172185 26.918548635039517 24.239800627716956 24.111405535521673 18-19 24.635364306644625 26.48167044330062 25.45640944081939 23.42655580923537 20-21 25.386321259151607 25.340151909841236 25.341522937289206 23.93200389371795 22-23 25.383236972822086 24.757190706066392 25.30059818009567 24.558974141015852 24-25 24.924687567801755 25.004927141712823 25.22573164198412 24.844653648501307 26-27 24.54089063053225 25.228727792590426 25.43934964633009 24.79103193054723 28-29 24.622493443870933 25.75281088356843 25.254473094935083 24.37022257762556 30-31 25.32896980548871 25.352962810499474 25.11382110198501 24.204246282026805 32-33 24.886312805598067 25.326391162099583 25.189421529528506 24.597874502773838 34-35 24.854804809127966 25.548800802892384 25.376081594487243 24.220312793492404 36-37 24.882226643102857 25.48350144714526 25.345642180137023 24.288629729614858 38-39 24.923221831323847 25.613916865695792 25.17703537554122 24.28582592743915 40-41 24.884875078963614 25.381193309438306 25.28450037241005 24.449431239188026 42-43 24.61799910675939 25.386096912150162 25.176977151755274 24.818926829335172 44-45 24.466548870337775 25.36938746480249 25.504436214316193 24.659627450543535 46-47 24.463694375804863 25.287300769551653 25.427219252125084 24.821785602518396 48-49 24.416947819824784 25.532477174408193 25.34419624816064 24.706378757606387 50-51 24.442889846859188 25.60823249680978 25.417659093658944 24.531218562672088 52-53 24.665702153154736 25.50452728383878 25.28728895268708 24.542481610319403 54-55 24.25535561268209 25.247060839760067 25.663410454155954 24.834173093401883 56-57 24.471960911002608 25.46796940473599 25.222069310646816 24.838000373614584 58-59 24.546748317208653 25.528042409289682 25.42356847053307 24.5016408029686 60-61 24.944824922168777 25.510097407705352 25.393526238452996 24.15155143167288 62-63 24.697276309403353 25.560237627128867 25.377890476543026 24.36459558692475 64-65 24.552188953794257 25.235597572098257 25.399089176958583 24.813124297148907 66-67 24.546567858784382 25.481931778415063 25.266410769743842 24.705089593056716 68-69 24.366945320295144 25.392179075030825 25.45966880332725 24.781206801346777 70-71 24.36058398413735 25.35741522410109 25.564301493207473 24.717699298554095 72-73 24.4836620662566 25.847058815464674 25.091120475080942 24.57815864319779 74-75 24.368043647326694 25.718312552890815 25.31972701912244 24.59391678066005 76-77 24.33954904659797 25.31930879038317 25.329420006909903 25.011722156108956 78-79 24.204740742568724 25.361341265875193 25.611443918670197 24.822474072885882 80-81 24.48718963778093 25.637587619134777 25.17926555362817 24.695957189456124 82-83 24.59840131728001 25.611245414352634 25.326449421033637 24.463903847333718 84-85 24.6318227827188 25.762516311540395 24.989228470566218 24.616432435174588 86-87 24.23160016987385 25.959165150221473 25.214441745368145 24.594792934536528 88-89 24.141862076860697 25.518193764742737 25.43260790433578 24.907336254060787 90-91 24.502987115813717 25.334341035053626 25.483028452149593 24.679643396983064 92-93 24.608331039664417 25.496400796448683 25.380820449083807 24.514447714803094 94-95 24.679020275759097 25.46044969038285 25.201904112941538 24.658625920916517 96-97 24.323713822288582 25.410022060708766 25.373277064129617 24.892987052873032 98-99 24.144664523950627 25.514716291211492 25.30871666345042 25.031902521387455 100-101 24.25391526103454 25.576517688513523 25.377746852538017 24.791820197913918 102-103 24.021197462638632 25.536560344594157 25.480348199960307 24.961893992806903 104-105 24.233788900093163 25.592640095861647 25.28906221615623 24.88450878788897 106-107 24.30254494999767 25.434452661626672 25.462902027240098 24.80010036113556 108-109 24.17871618437176 25.446593372693854 25.44169187396636 24.932998568968028 110-111 24.102732497418113 25.907361965503327 25.364351841219758 24.6255536958588 112-113 24.094146890207664 25.856393396322773 25.404332300723283 24.64512741274628 114-115 24.154970200015836 26.057000588493562 25.246785135413504 24.541244076077103 116-117 24.00969423935832 25.951763927243164 25.300545755102892 24.73799607829562 118-119 24.07456291962925 25.734285754497645 25.37711065425347 24.814040671619633 120-121 23.946609354674507 25.81956662947557 25.578355810808727 24.655468205041192 122-123 23.938781987347298 26.02454451169062 25.297038220642865 24.739635280319217 124-125 23.9052513387459 25.940172522051945 25.237656529762248 24.916919609439905 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 299.0 1 273.5 2 223.0 3 183.5 4 152.5 5 149.5 6 155.5 7 171.5 8 212.0 9 239.0 10 236.0 11 238.5 12 268.5 13 302.0 14 338.5 15 366.5 16 392.5 17 446.0 18 466.0 19 477.0 20 518.5 21 597.0 22 708.0 23 831.0 24 1014.0 25 1224.0 26 1637.5 27 2277.0 28 2967.0 29 3810.5 30 5161.5 31 6846.5 32 8810.0 33 10903.5 34 13235.5 35 15718.0 36 18789.5 37 22136.5 38 25044.0 39 28353.0 40 31387.5 41 34194.5 42 37415.5 43 41505.5 44 45893.5 45 49878.5 46 53760.0 47 57613.0 48 62056.0 49 65768.5 50 67480.5 51 68914.5 52 69313.0 53 68734.5 54 68230.0 55 66393.0 56 62634.5 57 57360.5 58 51994.0 59 46121.0 60 39523.5 61 33359.0 62 27243.0 63 20613.5 64 14825.5 65 10862.5 66 7978.5 67 5707.5 68 4101.0 69 3137.0 70 2461.0 71 1774.5 72 1255.0 73 983.5 74 726.0 75 525.0 76 370.0 77 220.0 78 133.0 79 91.5 80 66.0 81 44.5 82 39.0 83 31.0 84 18.0 85 16.0 86 10.5 87 5.5 88 11.0 89 11.0 90 7.5 91 5.0 92 5.5 93 5.0 94 4.5 95 4.5 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01713675058419183 2 0.012064272411271048 3 0.01172153739958721 4 0.014531964495394671 5 0.009322392317800354 6 0.029132475993126107 7 0.013366665455669625 8 0.012818289436975487 9 0.009802221334157726 10-11 0.008945383804948134 12-13 0.007711537762886322 14-15 0.0072659822476973356 16-17 0.005106751674089164 18-19 0.007026067739518649 20-21 0.00637487121731936 22-23 0.006511965221992894 24-25 0.006614785725498045 26-27 0.005312392681099466 28-29 0.0070946147418554165 30-31 0.006477691720824511 32-33 0.00928811881663197 34-35 0.008705469296769448 36-37 0.00815709327807531 38-39 0.007197435245360567 40-41 0.007642990760549555 42-43 0.008191366779243694 44-45 0.00825991378158046 46-47 0.010042135842336411 48-49 0.008808289800274599 50-51 0.0066833327278348125 52-53 0.005929315702130372 54-55 0.007060341240687033 56-57 0.008945383804948134 58-59 0.007951452271065008 60-61 0.00599786270446714 62-63 0.006649059226666429 64-65 0.004284187646047957 66-67 0.004284187646047957 68-69 0.007711537762886322 70-71 0.005518033688109768 72-73 0.004798290163573712 74-75 0.004764016662405328 76-77 0.0052781191799310834 78-79 0.0035644441215119 80-81 0.0036672646250170506 82-83 0.006134956709140674 84-85 0.010042135842336411 86-87 0.008465554788590762 88-89 0.005757948196288454 90-91 0.006032136205635524 92-93 0.008739742797937832 94-95 0.007951452271065008 96-97 0.010350597352851864 98-99 0.007711537762886322 100-101 0.00945948632247389 102-103 0.0064091447184877436 104-105 0.005757948196288454 106-107 0.008294187282748845 108-109 0.007917178769896624 110-111 0.009082477809621669 112-113 0.006169230210309058 114-115 0.0029817946016493777 116-117 0.0033245296133332146 118-119 0.1565956268383449 120-121 0.011687263898418827 122-123 0.0023305980794500886 124-125 0.001713675058419183 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1458853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.005886002379185 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60531202732327 49.17398476725087 2 10.326643808923592 12.59972109988735 3 3.439762575829181 6.295372907288558 4 1.665599899130614 4.0644559028774605 5 0.9502045200206208 2.898403431366171 6 0.6119445109506216 2.239933024490118 7 0.44061521815513705 1.8816085238780005 8 0.3224059466290374 1.5734928341232162 9 0.24877483160706781 1.3659056115553672 >10 1.3148259379558054 14.04649016082149 >50 0.05922591677307333 2.3896067951566504 >100 0.01446062519452685 1.3381587979908138 >500 1.1209075373716592E-4 0.05347469072128857 >1k 1.1209075373716592E-4 0.07939145259260362 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.854700233676731E-5 0.0 6 0.0 0.0 0.0 6.854700233676731E-5 0.0 7 0.0 0.0 0.0 6.854700233676731E-5 0.0 8 0.0 0.0 0.0 6.854700233676731E-5 0.0 9 0.0 0.0 0.0 6.854700233676731E-5 0.0 10-11 0.0 0.0 0.0 1.0282050350515098E-4 0.0 12-13 0.0 0.0 0.0 1.3709400467353463E-4 6.854700233676731E-5 14-15 0.0 0.0 0.0 1.3709400467353463E-4 1.0282050350515098E-4 16-17 0.0 0.0 0.0 2.0564100701030193E-4 1.3709400467353463E-4 18-19 0.0 0.0 0.0 2.3991450817868558E-4 1.3709400467353463E-4 20-21 0.0 0.0 0.0 3.4273501168383656E-4 1.3709400467353463E-4 22-23 0.0 0.0 0.0 5.483760186941384E-4 1.3709400467353463E-4 24-25 0.0 0.0 0.0 8.225640280412077E-4 2.7418800934706926E-4 26-27 0.0 0.0 0.0 9.93931533883126E-4 2.7418800934706926E-4 28-29 0.0 0.0 0.0 0.0027076065923023088 2.7418800934706926E-4 30-31 0.0 0.0 0.0 0.01031632385168348 2.7418800934706926E-4 32-33 0.0 0.0 0.0 0.026116407890308342 2.7418800934706926E-4 34-35 0.0 0.0 0.0 0.04602931206913925 2.7418800934706926E-4 36-37 0.0 0.0 0.0 0.07553879657511758 2.7418800934706926E-4 38-39 0.0 0.0 0.0 0.12681195432301953 2.7418800934706926E-4 40-41 0.0 0.0 0.0 0.1887441709342888 2.7418800934706926E-4 42-43 0.0 0.0 0.0 0.24389023431421808 2.7418800934706926E-4 44-45 0.0 0.0 0.0 0.30561680991847706 3.0846151051545294E-4 46-47 0.0 0.0 0.0 0.3663494539888529 3.770085128522202E-4 48-49 0.0 0.0 0.0 0.43897500296465786 6.169230210309058E-4 50-51 0.0 0.0 0.0 0.5166044831110468 6.169230210309058E-4 52-53 0.0 0.0 0.0 0.5980725953882948 6.169230210309058E-4 54-55 0.0 0.0 0.0 0.684030536318601 6.169230210309058E-4 56-57 0.0 0.0 0.0 0.7676921526706255 6.169230210309058E-4 58-59 0.0 0.0 0.0 0.8664683830379072 6.169230210309058E-4 60-61 0.0 0.0 0.0 0.9730932451727488 6.169230210309058E-4 62-63 0.0 0.0 0.0 1.0873268245669716 6.854700233676731E-4 64-65 0.0 0.0 0.0 1.1994697203899227 6.854700233676731E-4 66-67 0.0 0.0 0.0 1.3203180855096437 6.854700233676731E-4 68-69 0.0 0.0 0.0 1.4555613211200855 6.854700233676731E-4 70-71 0.0 0.0 0.0 1.6052337007224167 7.882905268728241E-4 72-73 0.0 0.0 0.0 1.7472630895641987 0.0011310255385566606 74-75 0.0 0.0 0.0 1.8916916234877674 0.0011652990397250443 76-77 0.0 0.0 0.0 2.057404001636902 0.0011652990397250443 78-79 0.0 0.0 0.0 2.2461824460723596 0.0011652990397250443 80-81 0.0 0.0 0.0 2.431156531878126 0.001268119543230195 82-83 0.0 0.0 0.0 2.631793607717844 0.0013709400467353462 84-85 0.0 0.0 0.0 2.831059743510827 0.0013709400467353462 86-87 0.0 0.0 0.0 3.048422287920716 0.0014394870490721135 88-89 0.0 0.0 0.0 3.2937177357828373 0.0015080340514088807 90-91 0.0 0.0 0.0 3.557726515282897 0.0015080340514088807 92-93 0.0 0.0 0.0 3.8146749535422693 0.0016451280560824154 94-95 6.854700233676731E-5 0.0 0.0 4.07738133999793 0.0017822220607559502 96-97 6.854700233676731E-5 0.0 0.0 4.369391569952558 0.0019535895665978684 98-99 6.854700233676731E-5 0.0 0.0 4.696429318101275 0.0021249570724397866 100-101 6.854700233676731E-5 0.0 0.0 5.043756978941675 0.0021249570724397866 102-103 6.854700233676731E-5 0.0 0.0 5.417646603187572 0.002227777575944938 104-105 6.854700233676731E-5 0.0 0.0 5.810866482092439 0.0023305980794500886 106-107 6.854700233676731E-5 0.0 0.0 6.213168838806926 0.0023305980794500886 108-109 6.854700233676731E-5 0.0 0.0 6.633841792147667 0.002399145081786856 110-111 6.854700233676731E-5 0.0 0.0 7.100304143049368 0.0025705125876287743 112-113 6.854700233676731E-5 0.0 0.0 7.563716152347084 0.002673333091133925 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2435 0.0 50.33867 1 GGTATCA 1455 0.0 50.300884 1 TCAACGC 2975 0.0 40.80155 4 CAACGCA 3020 0.0 40.193584 5 GTACATG 7735 0.0 38.309147 1 AACGCAG 3185 0.0 38.110035 6 TACATGG 8025 0.0 36.70233 2 ATCAACG 3380 0.0 36.264694 3 ACATGGG 8100 0.0 35.921734 3 TATCAAC 3485 0.0 35.00133 2 CATGGGG 7305 0.0 31.93003 4 ATGGGGG 4565 0.0 31.021988 5 ACGCAGA 4110 0.0 29.528908 7 GTGGTAT 785 0.0 28.045652 1 CGCAGAG 4380 0.0 27.844461 8 TGGGGGG 3310 0.0 25.705534 6 GAGTACA 5385 0.0 23.756708 1 GCAGAGT 5150 0.0 22.872677 9 AGTACAT 5405 0.0 22.567926 2 AGAGTAC 4500 0.0 22.478634 5 >>END_MODULE