Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921296_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1939763 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1675 | 0.0 | 56.841587 | 1 |
GTATCAA | 3320 | 0.0 | 53.232807 | 1 |
TCAACGC | 3970 | 0.0 | 43.46564 | 4 |
CAACGCA | 4015 | 0.0 | 42.680977 | 5 |
TATCAAC | 4310 | 0.0 | 40.312916 | 2 |
ATCAACG | 4300 | 0.0 | 39.991528 | 3 |
AACGCAG | 4290 | 0.0 | 39.94296 | 6 |
GTACATG | 9920 | 0.0 | 37.431217 | 1 |
TACATGG | 10505 | 0.0 | 35.061718 | 2 |
ACATGGG | 10695 | 0.0 | 33.715565 | 3 |
ACGCAGA | 5320 | 0.0 | 32.205486 | 7 |
CATGGGG | 9660 | 0.0 | 31.845789 | 4 |
ATGGGGG | 5755 | 0.0 | 30.5003 | 5 |
CGCAGAG | 5780 | 0.0 | 29.641657 | 8 |
GCAGAGT | 6695 | 0.0 | 25.234482 | 9 |
TGGGGGG | 4030 | 0.0 | 24.212732 | 6 |
AGTACAT | 7050 | 0.0 | 22.619566 | 2 |
GAGTACA | 7140 | 0.0 | 22.585623 | 1 |
AGAGTAC | 5930 | 0.0 | 22.220083 | 10-11 |
CAGAGTA | 6425 | 0.0 | 20.739655 | 10-11 |