##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921292_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1803465 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.330371257551437 33.0 30.0 34.0 19.0 34.0 2 30.083088388186074 33.0 31.0 34.0 26.0 34.0 3 30.32144399808147 33.0 31.0 34.0 27.0 34.0 4 32.55586274199943 37.0 35.0 37.0 19.0 37.0 5 32.24256029365693 37.0 33.0 37.0 19.0 37.0 6 32.37082560515452 37.0 35.0 37.0 17.0 37.0 7 32.581797262491925 37.0 35.0 37.0 17.0 37.0 8 32.818811011026 37.0 35.0 37.0 17.0 37.0 9 34.57059327461304 39.0 37.0 39.0 19.0 39.0 10-11 34.746248748936075 39.0 37.0 39.0 25.5 39.0 12-13 34.77023867943099 39.0 37.0 39.0 26.0 39.0 14-15 36.18404349405173 41.0 38.0 41.0 27.0 41.0 16-17 36.18954429390091 41.0 38.0 41.0 27.0 41.0 18-19 36.206793866251914 41.0 38.0 41.0 27.0 41.0 20-21 36.195752343405616 41.0 38.0 41.0 27.0 41.0 22-23 36.15027377853188 41.0 38.0 41.0 26.5 41.0 24-25 36.094574887785456 41.0 38.0 41.0 26.0 41.0 26-27 35.99531402051052 41.0 38.0 41.0 25.0 41.0 28-29 35.92217675419262 40.0 38.0 41.0 25.0 41.0 30-31 35.834912238385556 40.0 37.5 41.0 24.5 41.0 32-33 35.71519186676758 40.0 37.0 41.0 24.0 41.0 34-35 35.633683769854144 40.0 37.0 41.0 24.0 41.0 36-37 35.55211772892737 40.0 37.0 41.0 23.0 41.0 38-39 35.45402489097377 40.0 36.5 41.0 22.0 41.0 40-41 35.3241182945053 40.0 36.0 41.0 20.5 41.0 42-43 35.18609038711591 40.0 36.0 41.0 18.5 41.0 44-45 35.04286054899873 40.0 35.0 41.0 16.0 41.0 46-47 34.84253312373681 40.0 35.0 41.0 13.5 41.0 48-49 34.638594039806705 40.0 35.0 41.0 8.5 41.0 50-51 34.454260548444246 40.0 35.0 41.0 7.5 41.0 52-53 34.25778986561979 39.0 35.0 41.0 6.5 41.0 54-55 34.044873063796636 39.0 35.0 41.0 2.0 41.0 56-57 33.792674102352976 39.0 35.0 41.0 2.0 41.0 58-59 33.71962194996853 38.5 35.0 41.0 2.0 41.0 60-61 33.47196923699656 37.5 34.5 41.0 2.0 41.0 62-63 33.17388582534177 37.0 34.0 40.0 2.0 41.0 64-65 32.86630763557929 36.5 34.0 40.0 2.0 41.0 66-67 32.54197281344523 36.0 34.0 39.0 2.0 41.0 68-69 32.20442204312255 35.5 34.0 39.0 2.0 41.0 70-71 31.87810658926012 35.0 33.5 38.0 2.0 40.5 72-73 31.541667567709936 35.0 33.0 37.0 2.0 39.5 74-75 31.21407512760159 35.0 33.0 37.0 2.0 39.0 76-77 30.929010543592476 35.0 33.0 36.0 2.0 39.0 78-79 30.679743992813833 35.0 33.0 36.0 2.0 37.0 80-81 30.460128973947374 35.0 33.0 35.0 2.0 37.0 82-83 30.270730787678165 35.0 33.0 35.0 2.0 36.5 84-85 30.10869991932197 35.0 32.5 35.0 2.0 36.0 86-87 29.974489940198453 35.0 32.0 35.0 2.0 36.0 88-89 29.85589656577754 35.0 32.0 35.0 2.0 36.0 90-91 29.762674074628563 35.0 32.0 35.0 2.0 35.0 92-93 29.70072970642624 35.0 32.0 35.0 2.0 35.0 94-95 29.631988422287098 35.0 32.0 35.0 2.0 35.0 96-97 29.56889016421167 35.0 32.0 35.0 2.0 35.0 98-99 29.512981954182642 35.0 32.0 35.0 2.0 35.0 100-101 29.45680925329851 35.0 32.0 35.0 2.0 35.0 102-103 28.773115641279425 34.0 30.0 35.0 2.0 35.0 104-105 29.328094251898428 35.0 31.5 35.0 2.0 35.0 106-107 29.389071592739533 35.0 32.0 35.0 2.0 35.0 108-109 29.460140618198857 35.0 32.0 35.0 2.0 35.0 110-111 29.573845347705667 35.0 32.5 35.0 2.0 35.0 112-113 29.533725910954743 35.0 33.0 35.0 2.0 35.0 114-115 29.469156873019436 35.0 32.0 35.0 2.0 35.0 116-117 29.405420953553296 35.0 32.0 35.0 2.0 35.0 118-119 29.326335415436397 35.0 32.0 35.0 2.0 35.0 120-121 29.22758883593527 35.0 32.0 35.0 2.0 35.0 122-123 29.110798379785578 35.0 32.0 35.0 2.0 35.0 124-125 28.570129722506397 34.5 30.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 115021.0 3 7810.0 4 5838.0 5 5400.0 6 5485.0 7 5731.0 8 6042.0 9 5957.0 10 6214.0 11 6243.0 12 6786.0 13 7678.0 14 8652.0 15 7682.0 16 5366.0 17 4742.0 18 4361.0 19 3972.0 20 3847.0 21 4014.0 22 4576.0 23 5695.0 24 7424.0 25 9632.0 26 11649.0 27 13454.0 28 16149.0 29 19248.0 30 23305.0 31 28742.0 32 37135.0 33 50435.0 34 76301.0 35 132257.0 36 307157.0 37 628966.0 38 204250.0 39 249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.13290687037173 17.28616198915146 11.037344444518638 27.543586695958172 2 16.532785499025486 19.300624076430648 36.29125045398718 27.875339970556677 3 19.668305179196715 22.092804684316025 28.051611758476046 30.187278378011218 4 13.69662679574434 15.199883315438742 30.83145514077571 40.27203474804121 5 14.59703835452537 37.24270017547241 32.335082873081625 15.825178596920594 6 35.67171167452764 32.87021781075284 15.696886785230454 15.761183729489053 7 31.293925814180497 30.984892182092466 18.17702324962286 19.54415875410418 8 28.970698081159902 33.74692027910603 17.790819090692825 19.491562549041245 9 27.831920508428432 15.402961470276889 17.46555459500344 39.29956342629124 10-11 27.48847266362635 24.942214296586425 25.097002629155934 22.472310410631295 12-13 26.82335820365554 22.179507949330233 26.007175923871074 24.98995792314316 14-15 24.393930572536757 23.415342133060523 23.118663239929802 29.072064054472918 16-17 24.809963043363748 26.49300097312673 23.753524465404098 24.943511518105424 18-19 24.767821942760186 25.688604990947983 25.40420801069053 24.1393650556013 20-21 25.392175617491887 24.66069482912061 25.48483059000313 24.462298963384374 22-23 25.27379239408583 24.19647733668244 25.313271951493377 25.216458317738354 24-25 24.902202149750618 24.6204112638726 25.27942044896907 25.19796613740771 26-27 24.55184880216694 24.789862847352182 25.51455115569196 25.14373719478892 28-29 24.680240536966338 25.078030347137314 25.379394665269356 24.86233445062699 30-31 25.128183801737215 24.880133520750334 25.263395740976396 24.728286936536055 32-33 24.72071817307239 24.978499721369694 25.30062962131231 25.000152484245604 34-35 24.907331165284603 25.08889831518771 25.436479221942204 24.56729129758548 36-37 24.888034977113502 24.979276004801868 25.53093628099242 24.60175273709221 38-39 24.860643261721187 25.159318312248917 25.463732315293058 24.51630611073683 40-41 24.846753333166987 25.19480555486244 25.295750125452948 24.66269098651762 42-43 24.67749582054545 25.100930708386354 25.200627680603727 25.020945790464467 44-45 24.513145528191565 25.12521729004999 25.42142486823975 24.940212313518696 46-47 24.51214744949306 25.092280692999307 25.20958266448198 25.185989193025648 48-49 24.588888611644805 25.34870374529032 25.07370533944379 24.988702303621086 50-51 24.56055426637057 25.428855009661955 25.14528976165326 24.865300962314212 52-53 24.76771104512702 25.284438566869888 25.113018550401588 24.834831837601506 54-55 24.36107714871095 25.058373741658418 25.36287091792743 25.21767819170319 56-57 24.404743091770563 25.24401637958042 25.078141244770485 25.273099283878537 58-59 24.471614364570424 25.28862495252195 25.21942482942558 25.020335853482045 60-61 24.837216136714602 25.138885423337854 25.258322174258996 24.765576265688548 62-63 24.54649799136662 25.205202207971876 25.29322720429839 24.955072596363113 64-65 24.43185756307996 24.904863692946634 25.309861849273478 25.353416894699926 66-67 24.478711813093128 25.203122877349994 25.110412456022157 25.207752853534725 68-69 24.261879215842836 25.168827784293015 25.283690007846012 25.28560299201814 70-71 24.23127146908867 25.020446751115216 25.370661476657435 25.37762030313868 72-73 24.368174597233658 25.32003670711658 25.030067120792477 25.28172157485729 74-75 24.128164394651407 25.3429925171822 25.2572963711522 25.271546717014193 76-77 24.233933012284687 24.9825474849803 25.17689558710593 25.60662391562908 78-79 24.113969497605996 25.068853567992726 25.32752229735537 25.48965463704591 80-81 24.26193466465942 25.282886000005544 25.05751428500137 25.39766505033366 82-83 24.30928795402184 25.232566198955897 25.150446501595543 25.30769934542672 84-85 24.287552017921058 25.242131119816573 24.94525815582781 25.525058706434557 86-87 23.922310663084673 25.44343804842345 25.127352069488456 25.506899219003422 88-89 23.88488271189072 25.16023321772255 25.18964881492017 25.76523525546656 90-91 24.070696308568998 25.022144926379035 25.245465592398613 25.66169317265335 92-93 24.109716042342047 25.057119513068105 25.241487799393997 25.59167664519585 94-95 24.076845491146756 25.01273937973776 25.15266462356034 25.757750505555144 96-97 23.83353063979972 24.905639453160738 25.323476327382714 25.937353579656826 98-99 23.707696018497725 25.002897200666496 25.209444042440527 26.079962738395256 100-101 23.790730621331715 25.1031486610497 25.269439661984016 25.83668105563457 102-103 23.568796732955725 24.972039934237703 25.37440427177683 26.08475906102974 104-105 23.58959003917459 25.104340810606253 25.18327220101305 26.122796949206112 106-107 23.647995812497243 24.910484643004576 25.274312759102425 26.167206785395752 108-109 23.58262335350757 24.885012379016942 25.346487713860338 26.185876553615145 110-111 23.45550623664023 25.239082760590087 25.28588182128193 26.019529181487755 112-113 23.38723651535571 25.334587966006257 25.24589682161879 26.03227869701924 114-115 23.363242524504297 25.336117982166495 25.184797658277784 26.115841835051423 116-117 23.12969793484939 25.20383131904814 25.316559575746954 26.349911170355515 118-119 23.193048245911953 25.093258314510702 25.33360207623297 26.380091363344377 120-121 23.063788094408345 25.138435016843978 25.442350233314954 26.35542665543273 122-123 23.03069302593545 25.225222477721733 25.253169084177507 26.49091541216531 124-125 22.81881501898985 25.174837195208 25.14251050825259 26.863837277549557 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 67.0 1 51.0 2 58.0 3 68.5 4 54.0 5 74.5 6 183.0 7 402.5 8 582.5 9 663.0 10 622.5 11 528.0 12 525.5 13 563.5 14 612.0 15 659.0 16 726.0 17 798.0 18 813.0 19 886.0 20 976.5 21 1044.0 22 1144.0 23 1252.5 24 1398.0 25 1601.5 26 1983.5 27 2575.0 28 3282.5 29 4265.5 30 5736.0 31 7452.0 32 9763.5 33 12067.5 34 14310.0 35 17163.5 36 20631.5 37 24269.5 38 27762.5 39 31498.5 40 35149.5 41 38708.0 42 42675.0 43 47928.0 44 53400.5 45 58744.5 46 64051.5 47 69104.0 48 75105.5 49 79972.0 50 82467.0 51 84956.5 52 86017.0 53 85673.5 54 85748.0 55 83746.0 56 78807.0 57 72449.5 58 66224.0 59 59738.5 60 51858.5 61 44028.0 62 36887.5 63 28803.5 64 21336.5 65 16212.5 66 12209.5 67 9235.5 68 7220.5 69 5544.5 70 4281.0 71 3379.0 72 2645.5 73 2176.0 74 1766.5 75 1411.5 76 1070.5 77 688.5 78 430.0 79 316.5 80 275.0 81 227.0 82 194.5 83 167.5 84 141.5 85 132.5 86 127.5 87 116.5 88 116.0 89 106.0 90 89.0 91 88.5 92 81.0 93 71.5 94 69.0 95 66.0 96 59.5 97 44.5 98 29.0 99 13.0 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.35248812702214904 2 0.0 3 0.0 4 0.017355479590676837 5 0.17643813436911723 6 0.049404895576016176 7 0.023565747048043626 8 0.00754103905537396 9 0.005766676924697735 10-11 0.0019129841721353062 12-13 0.05816580859623003 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 2.495196746263443E-4 92-93 5.267637575445046E-4 94-95 1.1089763316726412E-4 96-97 5.544881658363206E-4 98-99 0.0 100-101 0.0 102-103 0.0 104-105 0.0 106-107 1.9407085804271223E-4 108-109 5.544881658363206E-4 110-111 5.544881658363206E-4 112-113 8.594566570462969E-4 114-115 3.326928995017924E-4 116-117 7.208346155872169E-4 118-119 3.6041730779360845E-4 120-121 8.31732248754481E-5 122-123 0.0014416692311744338 124-125 8.31732248754481E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1803465.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.532670847055805 #Duplication Level Percentage of deduplicated Percentage of total 1 82.23994765010578 52.24923524533271 2 9.619061959782673 12.222493946966162 3 3.0824992389446537 5.8751822860251215 4 1.49099370390196 3.7890724890014327 5 0.8648369239162058 2.7472699811774275 6 0.5661357879159792 2.15808712010427 7 0.3955552760126995 1.7591478206911804 8 0.285197697608397 1.4495497158793955 9 0.22561394420002845 1.290047080982978 >10 1.1691231374232285 12.976956264493758 >50 0.0493195918357811 2.0877821568734074 >100 0.011190722271822735 1.052981710526281 >500 2.6218304030722536E-4 0.10660600832972354 >1k 2.621830403072246E-4 0.2355881736161541 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.544881658363206E-5 2 0.0 0.0 0.0 0.0 1.1089763316726412E-4 3 0.0 0.0 0.0 0.0 1.1089763316726412E-4 4 0.0 0.0 0.0 0.0 1.1089763316726412E-4 5 0.0 0.0 0.0 0.0 1.1089763316726412E-4 6 0.0 0.0 0.0 0.0 1.1089763316726412E-4 7 0.0 0.0 0.0 0.0 1.1089763316726412E-4 8 0.0 0.0 0.0 0.0 2.2179526633452824E-4 9 0.0 0.0 0.0 0.0 2.772440829181603E-4 10-11 0.0 0.0 0.0 0.0 2.772440829181603E-4 12-13 0.0 0.0 0.0 0.0 3.049684912099763E-4 14-15 0.0 0.0 0.0 0.0 3.6041730779360845E-4 16-17 0.0 0.0 0.0 0.0 3.8814171608542446E-4 18-19 0.0 0.0 0.0 0.0 3.8814171608542446E-4 20-21 0.0 0.0 0.0 0.0 3.8814171608542446E-4 22-23 0.0 0.0 0.0 1.663464497508962E-4 3.8814171608542446E-4 24-25 0.0 0.0 0.0 3.326928995017924E-4 3.8814171608542446E-4 26-27 0.0 0.0 0.0 7.485590238790329E-4 4.435905326690565E-4 28-29 0.0 0.0 0.0 0.005045842309110518 4.435905326690565E-4 30-31 0.0 0.0 0.0 0.017300030774093204 4.713149409608725E-4 32-33 0.0 0.0 0.0 0.03834285666758157 5.544881658363206E-4 34-35 0.0 0.0 0.0 0.06481966658626588 5.544881658363206E-4 36-37 0.0 0.0 0.0 0.1049646097928155 6.099369824199527E-4 38-39 0.0 2.772440829181603E-5 0.0 0.1703110401366259 6.099369824199527E-4 40-41 0.0 5.544881658363206E-5 0.0 0.24461245435869286 6.099369824199527E-4 42-43 0.0 5.544881658363206E-5 0.0 0.3141729947628593 6.376613907117688E-4 44-45 0.0 5.544881658363206E-5 0.0 0.39426881031791583 6.931102072954007E-4 46-47 0.0 5.544881658363206E-5 0.0 0.48063034214692274 7.208346155872168E-4 48-49 0.0 5.544881658363206E-5 0.0 0.567851330632976 7.762834321708489E-4 50-51 0.0 5.544881658363206E-5 0.0 0.6628906022573213 7.762834321708489E-4 52-53 0.0 5.544881658363206E-5 0.0 0.7580684959231258 8.04007840462665E-4 54-55 0.0 8.31732248754481E-5 0.0 0.8667759008353364 8.594566570462969E-4 56-57 0.0 1.1089763316726412E-4 0.0 0.9827748251282947 8.87181065338113E-4 58-59 0.0 1.663464497508962E-4 0.0 1.1080614261990114 8.87181065338113E-4 60-61 0.0 1.663464497508962E-4 0.0 1.2372294444305822 8.87181065338113E-4 62-63 0.0 2.2179526633452824E-4 0.0 1.3720255175453917 9.426298819217451E-4 64-65 0.0 2.2179526633452824E-4 0.0 1.5102594172883865 9.426298819217451E-4 66-67 0.0 2.2179526633452824E-4 0.0 1.6682330957351543 9.703542902135612E-4 68-69 0.0 2.2179526633452824E-4 0.0 1.8437563246306414 9.980786985053771E-4 70-71 0.0 2.2179526633452824E-4 0.0 2.030424765659439 0.0010812519233808252 72-73 0.0 2.2179526633452824E-4 0.0 2.2089422306504423 0.0011089763316726412 74-75 0.0 2.2179526633452824E-4 0.0 2.394917561471944 0.0011367007399644574 76-77 0.0 2.772440829181603E-4 0.0 2.6062884502887496 0.0011644251482562733 78-79 0.0 2.772440829181603E-4 0.0 2.839811141330716 0.0011644251482562733 80-81 0.0 2.772440829181603E-4 0.0 3.080542178528555 0.0011644251482562733 82-83 0.0 2.772440829181603E-4 0.0 3.32748348318376 0.0013862204145908017 84-85 0.0 2.772440829181603E-4 0.0 3.5825480394684677 0.0013862204145908017 86-87 0.0 2.772440829181603E-4 0.0 3.8592099098125 0.0014139448228826176 88-89 0.0 2.772440829181603E-4 0.0 4.167255810342867 0.0014971180477580657 90-91 0.0 2.772440829181603E-4 0.0 4.500392300377329 0.0014971180477580657 92-93 0.0 2.772440829181603E-4 0.0 4.838546908312609 0.0014971180477580657 94-95 0.0 2.772440829181603E-4 0.0 5.181581012107249 0.0016080156809253298 96-97 0.0 2.772440829181603E-4 0.0 5.543994477297868 0.0016080156809253298 98-99 0.0 2.772440829181603E-4 0.0 5.948632216316923 0.0016080156809253298 100-101 0.0 2.772440829181603E-4 0.0 6.395771473247333 0.0016080156809253298 102-103 0.0 2.772440829181603E-4 0.0 6.854804501334931 0.0016080156809253298 104-105 0.0 2.772440829181603E-4 0.0 7.330555347622493 0.001635740089217146 106-107 0.0 2.772440829181603E-4 0.0 7.8282639252771755 0.001663464497508962 108-109 0.0 2.772440829181603E-4 0.0 8.34939962793844 0.00174663772238441 110-111 0.0 2.772440829181603E-4 0.0 8.90979309274092 0.0019407085804271221 112-113 0.0 2.772440829181603E-4 0.0 9.481359494084998 0.0019407085804271221 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2005 0.0 64.09954 1 GTATCAA 3140 0.0 46.640934 1 GTACATG 8350 0.0 38.443123 1 TACATGG 8560 0.0 37.45402 2 ACATGGG 8810 0.0 36.93233 3 TCAACGC 4165 0.0 33.76657 4 CATGGGG 7805 0.0 33.67097 4 CAACGCA 4340 0.0 32.679634 5 AACGCAG 4540 0.0 31.2374 6 ATCAACG 4545 0.0 30.943405 3 TATCAAC 4670 0.0 30.880793 2 ATGGGGG 4445 0.0 30.164818 5 GTGGTAT 1080 0.0 29.888275 1 ACGCAGA 5875 0.0 24.724598 1 GTAAGTA 720 0.0 24.002445 2 CGCAGAG 6480 0.0 23.08281 2 AGAGTAC 6420 0.0 22.927246 5 TGGTATC 1250 0.0 22.883432 2 ATGGGGA 3065 0.0 22.164825 5 CAGAGTA 6790 0.0 21.94119 4 >>END_MODULE