##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921289_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1550362 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.50087656947216 31.0 31.0 34.0 27.0 34.0 2 30.65386148525312 31.0 31.0 34.0 27.0 34.0 3 30.729503174097406 33.0 31.0 34.0 27.0 34.0 4 34.2093265959821 37.0 35.0 37.0 31.0 37.0 5 34.24926630038662 37.0 35.0 37.0 31.0 37.0 6 34.47232323805666 37.0 35.0 37.0 32.0 37.0 7 34.49620346731925 37.0 35.0 37.0 32.0 37.0 8 34.48750678873708 37.0 35.0 37.0 32.0 37.0 9 36.14335619681081 39.0 37.0 39.0 32.0 39.0 10-11 36.1417201272993 39.0 37.0 39.0 32.0 39.0 12-13 36.06702047650807 39.0 37.0 39.0 32.0 39.0 14-15 37.4234101455015 41.0 38.0 41.0 32.0 41.0 16-17 37.41150969902513 41.0 38.0 41.0 32.0 41.0 18-19 37.40191548812471 41.0 38.0 41.0 32.0 41.0 20-21 37.42578088214236 41.0 38.0 41.0 32.0 41.0 22-23 37.3795449062864 41.0 38.0 41.0 31.0 41.0 24-25 37.36611739709823 41.0 38.0 41.0 31.0 41.0 26-27 37.332823559916974 41.0 38.0 41.0 31.0 41.0 28-29 37.26800450475437 41.0 38.0 41.0 31.0 41.0 30-31 37.19775220238886 41.0 38.0 41.0 30.5 41.0 32-33 37.121613210334104 40.5 38.0 41.0 30.0 41.0 34-35 37.02154690323937 40.0 38.0 41.0 30.0 41.0 36-37 36.91766084308052 40.0 38.0 41.0 30.0 41.0 38-39 36.82185966890313 40.0 38.0 41.0 30.0 41.0 40-41 36.721962032093145 40.0 37.5 41.0 30.0 41.0 42-43 36.538918652546954 40.0 37.0 41.0 30.0 41.0 44-45 36.318115382084954 40.0 37.0 41.0 29.0 41.0 46-47 36.11655600433963 40.0 36.0 41.0 28.5 41.0 48-49 35.9145357664855 40.0 36.0 41.0 28.0 41.0 50-51 35.74487216533945 40.0 35.0 41.0 28.0 41.0 52-53 35.546394325970326 39.0 35.0 41.0 27.5 41.0 54-55 35.33450026509938 39.0 35.0 41.0 27.0 41.0 56-57 35.084499297583406 39.0 35.0 41.0 26.5 41.0 58-59 34.81155207622478 38.0 35.0 40.0 26.0 41.0 60-61 34.51864209778103 38.0 34.5 40.0 26.0 41.0 62-63 34.18390575878408 37.0 34.0 40.0 26.0 41.0 64-65 33.81975177410179 36.5 34.0 39.5 25.5 41.0 66-67 33.46837641789466 36.0 34.0 39.0 24.5 41.0 68-69 33.10478133493984 35.5 33.5 39.0 23.5 40.0 70-71 33.028490120371885 35.0 34.0 38.5 25.0 40.0 72-73 32.726909263771944 35.0 34.0 37.0 24.0 39.5 74-75 32.40576297664674 35.0 33.5 37.0 24.0 39.0 76-77 32.11206608521107 35.0 33.0 36.0 23.0 39.0 78-79 31.83281904484243 35.0 33.0 36.0 23.0 37.5 80-81 31.57435360257798 35.0 33.0 35.5 21.5 37.0 82-83 31.36741257848167 35.0 33.0 35.0 20.5 37.0 84-85 31.163761108695905 35.0 33.0 35.0 20.0 36.0 86-87 31.004035186620932 35.0 33.0 35.0 20.0 36.0 88-89 30.883081499675562 35.0 33.0 35.0 19.0 36.0 90-91 30.771233428063898 35.0 33.0 35.0 18.5 35.0 92-93 30.664823118729693 35.0 32.0 35.0 18.0 35.0 94-95 30.548756677472745 35.0 32.0 35.0 17.0 35.0 96-97 30.46249230824801 35.0 32.0 35.0 15.5 35.0 98-99 30.380208299739028 35.0 32.0 35.0 12.5 35.0 100-101 30.293459527516802 35.0 32.0 35.0 9.0 35.0 102-103 29.47375322666577 34.0 30.5 35.0 7.0 35.0 104-105 30.05789389832826 34.5 31.5 35.0 7.0 35.0 106-107 30.12974614960893 35.0 32.0 35.0 6.0 35.0 108-109 30.058298320005264 35.0 32.0 35.0 2.0 35.0 110-111 29.97740301942385 35.0 32.0 35.0 2.0 35.0 112-113 29.887024449773666 35.0 31.5 35.0 2.0 35.0 114-115 29.75702352095833 35.0 31.0 35.0 2.0 35.0 116-117 29.62704194246247 35.0 31.0 35.0 2.0 35.0 118-119 29.62056474552395 34.5 31.5 35.0 2.0 35.0 120-121 29.778963235683023 35.0 32.0 35.0 2.0 35.0 122-123 29.647008569611486 35.0 32.0 35.0 2.0 35.0 124-125 29.090623028686203 34.5 31.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 45855.0 3 6590.0 4 4276.0 5 3733.0 6 3902.0 7 4469.0 8 4605.0 9 4841.0 10 5193.0 11 5916.0 12 6032.0 13 5979.0 14 5832.0 15 5075.0 16 4100.0 17 3857.0 18 3812.0 19 3609.0 20 3642.0 21 3866.0 22 4514.0 23 5805.0 24 8586.0 25 10889.0 26 11460.0 27 12921.0 28 15539.0 29 18891.0 30 23226.0 31 29173.0 32 37624.0 33 51336.0 34 80526.0 35 137553.0 36 303174.0 37 526005.0 38 137894.0 39 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.07018605452292 17.013012398258994 11.403572716476027 25.513228830742058 2 17.133934682466112 18.72336198160086 38.26720879690823 25.875494539024796 3 21.051249747612072 22.295610933606334 27.840275372163337 28.81286394661826 4 13.937212325298601 14.147192681974913 33.773098645610574 38.142496347115916 5 14.921979319197796 37.40612683279255 32.599356224560225 15.072537623449422 6 35.86100147946269 32.722062963299905 16.37725847110144 15.039677086135958 7 31.30952987645847 31.216894695861804 18.527939247835878 18.94563617984385 8 28.51055923940705 34.731082424448076 18.152137941978854 18.606220394166016 9 28.17324699753455 15.664103169473353 17.570147836508998 38.592501996483094 10-11 27.507570599529558 24.880687867463145 25.691981340959675 21.919760192047622 12-13 26.815882641507855 22.00533007882234 26.31348255790889 24.86530472176092 14-15 24.28360866171699 23.573700065149943 23.1838002412483 28.95889103188477 16-17 24.995371848583655 26.779322645044974 23.975856208012022 24.249449298359345 18-19 24.9047425840481 26.169423062905693 25.344407081849457 23.581427271196752 20-21 25.494933987837697 25.143578670339117 25.246301883688943 24.115185458134246 22-23 25.406490823276556 24.664657568531123 25.142022639766598 24.786828968425727 24-25 25.001967396689096 24.828449459191678 25.162971401147672 25.006611742971558 26-27 24.642139419766437 25.233416081319003 25.262668682204193 24.861775816710363 28-29 24.714283548763618 25.77513135619323 25.03596955239073 24.474615542652423 30-31 25.3943317372786 25.17043684338517 25.065520379853716 24.36971103948252 32-33 24.903885849932912 25.145558107131798 25.133366446485706 24.81718959644958 34-35 24.918802947412694 25.373635454100363 25.310193705365812 24.39736789312113 36-37 24.900129204716908 25.459392757182215 25.198306340964994 24.442171697135887 38-39 24.985236304596242 25.577235494407212 25.131179989363044 24.3063482116335 40-41 25.035107263413813 25.232011115633686 25.22465745825348 24.508224162699026 42-43 24.8367279997652 25.220182157657746 25.08930008408318 24.853789758493868 44-45 24.42895519143519 25.330067624554868 25.444694260701738 24.7962829233082 46-47 24.6163204630054 25.1771765224215 25.280129684860757 24.92637332971234 48-49 24.482571218926132 25.50209242132254 25.22987606737677 24.785460292374555 50-51 24.56976140016584 25.495178753942447 25.370684592105846 24.564375253785865 52-53 24.68170307079615 25.42685782328634 25.23876301214876 24.652676093768747 54-55 24.357820712289747 25.05112019341172 25.627923688033295 24.963135406265238 56-57 24.556587647153684 25.32559264634736 25.197419771004675 24.920399935494274 58-59 24.5769635294425 25.444178215069112 25.373447710547424 24.605410544940963 60-61 24.929948228773863 25.320973861529712 25.437630056983178 24.311447852713247 62-63 24.81367833856681 25.44134076770846 25.37819072216818 24.36679017155655 64-65 24.571996752906436 25.176811468935718 25.409700450135926 24.84149132802192 66-67 24.577389065234346 25.421707885490775 25.19997703674701 24.800926012527874 68-69 24.410456012065026 25.366646756105084 25.457566636951334 24.765330594878556 70-71 24.39301600734831 25.231569876048837 25.591632006440097 24.783782110162758 72-73 24.495651952356116 25.637887277473588 25.136917622372795 24.729543147797497 74-75 24.32872799704316 25.661112698614403 25.292571839182404 24.717587465160037 76-77 24.39144509274546 25.236415216106135 25.307659882028638 25.064479809119767 78-79 24.270195760469015 25.280314362325544 25.52787727381503 24.92161260339041 80-81 24.52068565486916 25.61052974124266 25.14736535545875 24.72141924842943 82-83 24.694531086471123 25.52173622773427 25.178959549578284 24.604773136216316 84-85 24.6285113263285 25.677946066208214 25.02213401943149 24.67140858803179 86-87 24.25380258795299 25.80741295008579 25.247571375124174 24.691213086837045 88-89 24.199181055390998 25.434370903986874 25.328971133105593 25.037476907516538 90-91 24.62170653193011 25.26849104148303 25.383727954449654 24.72607447213721 92-93 24.51251981544823 25.575547051509684 25.32794062864358 24.583992504398505 94-95 24.655210727759275 25.29823252057641 25.23704917599226 24.809507575672058 96-97 24.29765079414227 25.32317868491433 25.38326669788792 24.995903823055478 98-99 24.1750316802413 25.42343799235804 25.259529632676912 25.14200069472374 100-101 24.20313797180689 25.48613534575681 25.404792944562672 24.905933737873628 102-103 24.07891609222724 25.401709820712977 25.513528366981568 25.005845720078216 104-105 24.267788094515495 25.493110785077977 25.32620604398351 24.91289507642302 106-107 24.293461871533832 25.300588129998175 25.4686575251451 24.937292473322895 108-109 24.260836527408845 25.342425106401095 25.458824485604403 24.937913880585654 110-111 24.08280744939355 25.786277928613956 25.367473699352427 24.763440922640072 112-113 24.103155392646176 25.87141375846015 25.3973066199225 24.62812422897117 114-115 24.225881305724112 25.904687880463968 25.222122422520403 24.647308391291517 116-117 24.012558697559214 25.841987460653282 25.32022421177563 24.82522963001187 118-119 24.128450175765117 25.672560388876487 25.35610888360806 24.842880551750333 120-121 23.892999820023572 25.730855894357063 25.574102230482072 24.802042055137292 122-123 23.970375425432383 25.94823891231215 25.30379734179946 24.777588320456005 124-125 23.966048715796997 25.86469797895815 25.28846916706604 24.88078413817881 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 239.0 1 229.0 2 202.0 3 168.5 4 152.0 5 156.0 6 148.5 7 175.0 8 229.5 9 252.0 10 245.5 11 238.5 12 264.0 13 293.5 14 327.5 15 365.0 16 387.5 17 424.5 18 451.0 19 470.5 20 517.5 21 577.0 22 677.0 23 808.5 24 944.5 25 1158.5 26 1545.0 27 2048.0 28 2652.0 29 3518.0 30 4802.5 31 6336.5 32 8377.0 33 10608.5 34 12943.0 35 15635.5 36 18750.5 37 22176.0 38 25369.5 39 28642.0 40 32044.0 41 35311.0 42 38788.5 43 43358.0 44 48727.5 45 53808.5 46 57796.5 47 61629.0 48 66644.0 49 71170.0 50 73161.5 51 74509.5 52 74839.0 53 73766.0 54 73533.5 55 71620.5 56 66697.0 57 60810.0 58 55268.5 59 49244.5 60 42184.0 61 35462.5 62 29270.0 63 22595.5 64 16576.5 65 12342.0 66 9233.0 67 6913.0 68 5162.5 69 3833.0 70 2847.0 71 2196.5 72 1621.5 73 1149.5 74 868.5 75 640.0 76 446.0 77 270.5 78 165.0 79 114.0 80 76.5 81 56.0 82 46.5 83 38.0 84 28.0 85 20.5 86 17.0 87 13.0 88 12.5 89 10.5 90 6.0 91 5.5 92 4.0 93 5.0 94 5.5 95 2.5 96 0.5 97 1.0 98 1.5 99 3.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014512739605330885 2 0.011674692749177288 3 0.010900679970226309 4 0.01399673108603023 5 0.008514140568460785 6 0.03063800583347631 7 0.012577707657953434 8 0.013093716177254086 9 0.008772144828111112 10-11 0.007836879386878676 12-13 0.0066758602184522065 14-15 0.005934097971957517 16-17 0.004321571349142974 18-19 0.005740594777219772 20-21 0.005127834660550246 22-23 0.005224586257919118 24-25 0.005805095842132353 26-27 0.004676327206162174 28-29 0.005966348504413808 30-31 0.005224586257919118 32-33 0.007869129919334968 34-35 0.007804628854422386 36-37 0.007030616075471407 38-39 0.006869363413189951 40-41 0.0072886203351217324 42-43 0.00719186873775286 44-45 0.00719186873775286 46-47 0.009191401750042894 48-49 0.008030382581616423 50-51 0.005708344244763481 52-53 0.005160085193006537 54-55 0.0060631001017826805 56-57 0.007224119270209151 58-59 0.00719186873775286 60-61 0.005160085193006537 62-63 0.005547091582482027 64-65 0.0033863059079105393 66-67 0.0038055628298423205 68-69 0.006192102231607844 70-71 0.0047730788035310456 72-73 0.004418322946511847 74-75 0.0038055628298423205 76-77 0.00454732507633701 78-79 0.0031605521807165035 80-81 0.003128301648260213 82-83 0.005256836790375409 84-85 0.00944940600969322 86-87 0.006579108621083335 88-89 0.0047730788035310456 90-91 0.004998832530725083 92-93 0.007707877257053514 94-95 0.0066758602184522065 96-97 0.008772144828111112 98-99 0.0068048623482773705 100-101 0.008062633114072713 102-103 0.00532133785528799 104-105 0.004934331465812501 106-107 0.007062866607927697 108-109 0.006192102231607844 110-111 0.0074176224649468965 112-113 0.005127834660550246 114-115 0.002225286739484069 116-117 0.0027090447263284317 118-119 0.1558023222963411 120-121 0.010255669321100492 122-123 0.0017737792850959968 124-125 0.0014835244929893793 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1550362.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.813859518003554 #Duplication Level Percentage of deduplicated Percentage of total 1 79.66512473974177 47.65078579667144 2 10.745235749066344 12.85428043164968 3 3.617573394793246 6.491430804966912 4 1.7881237325695778 4.278183269628995 5 1.0316206086155726 3.0852605079804594 6 0.6704079754346635 2.4059813077438883 7 0.4655407350148455 1.949205168686026 8 0.3364069183800943 1.6097436925497157 9 0.2549644813194236 1.3725368700948581 >10 1.3478548965644492 14.113270652064228 >50 0.06108519350724244 2.4358682528043114 >100 0.015846001434508497 1.6274760657458969 >500 1.0778677914694353E-4 0.060216318102509936 >1k 1.0778677914694353E-4 0.06576086131109223 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.450106491258171E-5 2 0.0 0.0 0.0 0.0 6.450106491258171E-5 3 0.0 0.0 0.0 0.0 6.450106491258171E-5 4 0.0 0.0 0.0 0.0 6.450106491258171E-5 5 0.0 0.0 0.0 0.0 6.450106491258171E-5 6 0.0 0.0 0.0 0.0 3.8700638947549023E-4 7 0.0 0.0 0.0 0.0 3.8700638947549023E-4 8 0.0 0.0 0.0 0.0 3.8700638947549023E-4 9 0.0 0.0 0.0 0.0 3.8700638947549023E-4 10-11 0.0 0.0 0.0 0.0 3.8700638947549023E-4 12-13 0.0 0.0 0.0 0.0 3.8700638947549023E-4 14-15 0.0 0.0 0.0 0.0 4.837579868443628E-4 16-17 0.0 0.0 0.0 0.0 5.160085193006537E-4 18-19 0.0 0.0 0.0 0.0 5.160085193006537E-4 20-21 0.0 0.0 0.0 6.450106491258171E-5 5.160085193006537E-4 22-23 0.0 0.0 0.0 9.675159736887256E-5 5.160085193006537E-4 24-25 0.0 0.0 0.0 1.6125266228145425E-4 5.160085193006537E-4 26-27 0.0 0.0 0.0 5.482590517569445E-4 5.160085193006537E-4 28-29 0.0 0.0 0.0 0.0034830575052794124 5.160085193006537E-4 30-31 0.0 0.0 0.0 0.013125966709710377 5.160085193006537E-4 32-33 0.0 0.0 0.0 0.031895776599271654 5.160085193006537E-4 34-35 0.0 0.0 0.0 0.05311662695551104 5.805095842132354E-4 36-37 0.0 0.0 0.0 0.08514140568460785 5.805095842132354E-4 38-39 0.0 0.0 0.0 0.1410638289638162 5.805095842132354E-4 40-41 0.0 0.0 0.0 0.21088623173168589 5.805095842132354E-4 42-43 0.0 0.0 0.0 0.2704207146459988 5.805095842132354E-4 44-45 0.0 0.0 0.0 0.33643755458402613 5.805095842132354E-4 46-47 0.0 0.0 0.0 0.4052601908457509 5.805095842132354E-4 48-49 0.0 0.0 0.0 0.48337098045488736 5.805095842132354E-4 50-51 0.0 0.0 0.0 0.5657065898157978 5.805095842132354E-4 52-53 0.0 0.0 0.0 0.6551373163170924 5.805095842132354E-4 54-55 0.0 0.0 0.0 0.7513729051666642 6.127601166695262E-4 56-57 0.0 0.0 0.0 0.8493177722364196 6.45010649125817E-4 58-59 0.0 0.0 0.0 0.9610981177299237 6.772611815821078E-4 60-61 0.0 0.0 0.0 1.08242462083049 7.740127789509805E-4 62-63 0.0 0.0 0.0 1.2122330139670605 7.740127789509805E-4 64-65 0.0 0.0 0.0 1.3338820223921897 7.740127789509805E-4 66-67 0.0 0.0 0.0 1.475848866264782 7.740127789509805E-4 68-69 0.0 0.0 0.0 1.6323607002751617 8.062633114072713E-4 70-71 0.0 0.0 0.0 1.8000312185154177 9.675159736887256E-4 72-73 0.0 0.0 0.0 1.9603486153556395 0.0012255202333390524 74-75 0.0 0.0 0.0 2.124084568636228 0.0012255202333390524 76-77 0.0 0.0 0.0 2.3188132836073123 0.0012255202333390524 78-79 0.0 0.0 0.0 2.537987902180265 0.0012255202333390524 80-81 0.0 0.0 0.0 2.751970185027755 0.0012577707657953432 82-83 0.0 0.0 0.0 2.9815617255840894 0.0013545223631642159 84-85 0.0 0.0 0.0 3.2165391050606242 0.0013867728956205067 86-87 0.0 0.0 0.0 3.4758978870741157 0.0014190234280767975 88-89 0.0 0.0 0.0 3.774860322943932 0.0014190234280767975 90-91 0.0 0.0 0.0 4.087496984575216 0.0014190234280767975 92-93 0.0 0.0 0.0 4.385524155003798 0.0014190234280767975 94-95 0.0 0.0 0.0 4.693419988364008 0.0014512739605330883 96-97 0.0 0.0 0.0 5.034082362699808 0.0014835244929893793 98-99 0.0 0.0 0.0 5.42924813688674 0.001548025557901961 100-101 0.0 0.0 0.0 5.850762596090462 0.001548025557901961 102-103 0.0 0.0 0.0 6.280178435745974 0.0018382803500085786 104-105 0.0 0.0 0.0 6.730944127887551 0.0019027814149211605 106-107 0.0 0.0 0.0 7.208381010370481 0.0019350319473774513 108-109 0.0 0.0 0.0 7.701588403224537 0.001999533012290033 110-111 0.0 0.0 0.0 8.234883207921762 0.0020640340772026147 112-113 0.0 0.0 0.0 8.767145995580385 0.0020640340772026147 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1325 0.0 55.689735 1 GTATCAA 2280 0.0 49.850315 1 TCAACGC 2690 0.0 40.698544 4 GTACATG 7790 0.0 39.34043 1 CAACGCA 2800 0.0 38.462173 5 TACATGG 8175 0.0 36.973392 2 AACGCAG 2970 0.0 36.658943 6 ACATGGG 8180 0.0 36.441628 3 ATCAACG 3005 0.0 36.0363 3 TATCAAC 3165 0.0 34.402554 2 ATGGGGG 4710 0.0 33.729015 5 CATGGGG 7665 0.0 33.689217 4 TGGGGGG 3245 0.0 28.23523 6 ACGCAGA 4000 0.0 27.068779 7 CGCAGAG 4260 0.0 25.69517 8 GTATAGG 475 0.0 25.055655 1 AGTACAT 5200 0.0 24.600754 2 GAGTACA 5320 0.0 24.384521 1 AGAGTAC 4455 0.0 23.906645 5 ACCGTAT 175 1.7535656E-5 23.79596 8 >>END_MODULE