##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921288_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1365451 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.32672574848896 33.0 30.0 34.0 19.0 34.0 2 30.07342043031936 33.0 31.0 34.0 26.0 34.0 3 30.305800794023366 33.0 31.0 34.0 27.0 34.0 4 32.51553076602529 37.0 35.0 37.0 19.0 37.0 5 32.1478910630993 37.0 33.0 37.0 19.0 37.0 6 32.28881959147564 37.0 35.0 37.0 17.0 37.0 7 32.50468819459651 37.0 35.0 37.0 17.0 37.0 8 32.749540627968344 37.0 35.0 37.0 17.0 37.0 9 34.50822695212058 39.0 37.0 39.0 17.0 39.0 10-11 34.680353597456076 39.0 37.0 39.0 24.0 39.0 12-13 34.705743010917274 39.0 37.0 39.0 25.0 39.0 14-15 36.13939313823784 41.0 38.0 41.0 27.0 41.0 16-17 36.15741941673484 41.0 38.0 41.0 27.0 41.0 18-19 36.18602791312175 41.0 38.0 41.0 27.0 41.0 20-21 36.173363233100275 41.0 38.0 41.0 27.0 41.0 22-23 36.131879869728024 41.0 38.0 41.0 26.0 41.0 24-25 36.08604519678846 41.0 38.0 41.0 26.0 41.0 26-27 35.994686737202585 41.0 38.0 41.0 25.0 41.0 28-29 35.91726652952028 40.0 38.0 41.0 25.0 41.0 30-31 35.82498676261543 40.0 37.5 41.0 24.0 41.0 32-33 35.697357503125346 40.0 37.0 41.0 24.0 41.0 34-35 35.616454563364044 40.0 37.0 41.0 23.5 41.0 36-37 35.537704758354565 40.0 37.0 41.0 23.0 41.0 38-39 35.43993083603878 40.0 36.5 41.0 21.5 41.0 40-41 35.31158020317097 40.0 36.0 41.0 19.5 41.0 42-43 35.16974501465084 40.0 36.0 41.0 17.0 41.0 44-45 35.01459517771052 40.0 35.5 41.0 15.0 41.0 46-47 34.795127397467944 40.0 35.0 41.0 9.0 41.0 48-49 34.57261446950494 40.0 35.0 41.0 7.5 41.0 50-51 34.384799967190325 40.0 35.0 41.0 2.0 41.0 52-53 34.19815833742844 39.5 35.0 41.0 2.0 41.0 54-55 33.998882054354205 39.0 35.0 41.0 2.0 41.0 56-57 33.756228528156626 39.0 35.0 41.0 2.0 41.0 58-59 33.687149154381956 39.0 35.0 41.0 2.0 41.0 60-61 33.45024720769914 38.0 35.0 41.0 2.0 41.0 62-63 33.16234892354248 37.0 34.0 40.5 2.0 41.0 64-65 32.86187603949172 37.0 34.0 40.0 2.0 41.0 66-67 32.53946754588777 36.0 34.0 39.0 2.0 41.0 68-69 32.203744770043016 36.0 34.0 39.0 2.0 41.0 70-71 31.876938828269928 35.0 34.0 38.5 2.0 40.5 72-73 31.53628654561753 35.0 33.0 37.0 2.0 39.5 74-75 31.202775493225314 35.0 33.0 37.0 2.0 39.0 76-77 30.910104427035463 35.0 33.0 36.5 2.0 39.0 78-79 30.655357826827913 35.0 33.0 36.0 2.0 37.5 80-81 30.424609158439225 35.0 33.0 35.5 2.0 37.0 82-83 30.225293327992 35.0 33.0 35.0 2.0 37.0 84-85 30.054580867420363 35.0 32.5 35.0 2.0 36.0 86-87 29.913651240505885 35.0 32.0 35.0 2.0 36.0 88-89 29.787652943972358 35.0 32.0 35.0 2.0 36.0 90-91 29.68655740850459 35.0 32.0 35.0 2.0 35.5 92-93 29.6177435147801 35.0 32.0 35.0 2.0 35.0 94-95 29.547034642766384 35.0 32.0 35.0 2.0 35.0 96-97 29.488028863723414 35.0 32.0 35.0 2.0 35.0 98-99 29.427192553962023 35.0 32.0 35.0 2.0 35.0 100-101 29.37527637388672 35.0 32.0 35.0 2.0 35.0 102-103 28.70885663418167 34.0 30.0 35.0 2.0 35.0 104-105 29.248837563559587 35.0 31.5 35.0 2.0 35.0 106-107 29.307085717466244 35.0 32.0 35.0 2.0 35.0 108-109 29.373574372130527 35.0 32.0 35.0 2.0 35.0 110-111 29.476103133689897 35.0 32.0 35.0 2.0 35.0 112-113 29.442031973318706 35.0 32.5 35.0 2.0 35.0 114-115 29.383709484997997 35.0 32.0 35.0 2.0 35.0 116-117 29.325897084553013 35.0 32.0 35.0 2.0 35.0 118-119 29.253654287118323 35.0 32.0 35.0 2.0 35.0 120-121 29.162204282687554 35.0 32.0 35.0 2.0 35.0 122-123 29.050939945849393 35.0 32.0 35.0 2.0 35.0 124-125 28.535250257973374 34.5 30.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 88864.0 3 5870.0 4 4190.0 5 3912.0 6 4078.0 7 4225.0 8 4389.0 9 4472.0 10 4638.0 11 4769.0 12 5346.0 13 6570.0 14 7864.0 15 7044.0 16 4390.0 17 3848.0 18 3599.0 19 3043.0 20 2926.0 21 3100.0 22 3429.0 23 4352.0 24 5705.0 25 7388.0 26 8704.0 27 9846.0 28 11845.0 29 14156.0 30 17077.0 31 20938.0 32 27164.0 33 36370.0 34 55877.0 35 95947.0 36 219814.0 37 476664.0 38 172654.0 39 384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.33297769783327 17.34354977133519 11.11280111452051 27.210671416311033 2 16.34800516459397 19.159969856113474 36.976207860992446 27.515817118300106 3 19.817920965307433 22.071022687741998 28.290725921325627 29.82033042562494 4 13.471198965128767 14.87012102309269 31.50131043646544 40.157369575313105 5 14.019599356176263 37.415798918059195 32.508183516175556 16.056418209588983 6 35.14627981096824 33.13851338974979 15.97252445323662 15.742682346045353 7 30.7265471284306 31.603525494051166 18.057315649214516 19.612611728303722 8 28.69049851173038 34.46398856258936 17.41810122577167 19.427411699908596 9 27.601049384343607 15.491529048493744 17.758017595204823 39.149403971957824 10-11 27.21823894304358 24.905927070593144 25.227803695539137 22.648030290824135 12-13 26.57786056381787 22.130459824019415 26.230786929836388 25.06089268232632 14-15 23.912428933736912 23.696968986803626 23.545919992735 28.84468208672446 16-17 24.130964787458502 26.91931090899637 24.326614429957573 24.623109873587552 18-19 24.20661744727566 25.87657850776044 26.11983146960235 23.796972575361547 20-21 24.82666899068513 24.740470364736634 26.245101435349934 24.187759209228307 22-23 24.679355026288018 24.291278119830004 26.105623709675413 24.92374314420657 24-25 24.25912757030461 24.88987155159724 26.031765328818096 24.819235549280055 26-27 24.034732846510053 25.063111016067218 26.217418274255174 24.684737863167555 28-29 24.107968722422115 25.356384081157067 26.109285503471014 24.4263616929498 30-31 24.621169122875884 25.056519787235132 26.039821275168425 24.282489814720556 32-33 24.276484472895767 25.094053173640063 26.017264625387508 24.61219772807666 34-35 24.3507456510706 25.23422664013575 26.25476857097032 24.160259137823328 36-37 24.37916117092448 25.24085448690579 26.27908288177313 24.1009014603966 38-39 24.276191529392122 25.400765021959774 26.26165274330606 24.061390705342045 40-41 24.223534934611347 25.444926255134746 26.147368158945287 24.184170651308616 42-43 24.120821618644683 25.38652064409488 25.93630236456673 24.556355372693712 44-45 24.039895975761855 25.453934267871936 26.13070699717529 24.37546275919092 46-47 24.055568453207034 25.485498930390033 25.70692760121015 24.752005015192783 48-49 24.049380021692464 25.744900402870552 25.60216368071795 24.603555894719033 50-51 24.05088135714866 25.785766021629485 25.68470051287084 24.478652108351014 52-53 24.232689419100357 25.76489379699455 25.581584399586653 24.42083238431844 54-55 23.922938281930293 25.40380431081013 25.865483272559764 24.807774134699816 56-57 23.935754560214903 25.690852326447448 25.59308243210485 24.780310681232795 58-59 23.98577466346284 25.718608723418125 25.781628194640454 24.513988418478583 60-61 24.288678246235126 25.50589512183154 25.88082618856334 24.32460044336999 62-63 24.166740512841546 25.517210064659956 25.869254920169233 24.446794502329265 64-65 23.99749240360877 25.24781189511744 25.887087855953823 24.867607845319974 66-67 23.94622729047033 25.640319572068133 25.65423438849142 24.75921874897012 68-69 23.773573713007643 25.56741325759767 25.87251391664732 24.78649911274736 70-71 23.789539133956474 25.38168707628469 25.896132486628957 24.93264130312988 72-73 23.865997388408665 25.64365180442213 25.632153771903937 24.858197035265274 74-75 23.658776477515488 25.68147813433071 25.770569577377735 24.889175810776074 76-77 23.73640650598227 25.337049809916284 25.762440395151494 25.164103288949953 78-79 23.637391601749165 25.43467323250706 25.906348891318693 25.02158627442508 80-81 23.8003414256535 25.586125023893203 25.569427244185256 25.044106306268038 82-83 23.87039154096339 25.567340021721762 25.654380860243247 24.907887577071605 84-85 23.83791142999639 25.656065285389225 25.48403421287179 25.021989071742595 86-87 23.488576301895858 25.81787995321692 25.647240362341822 25.0463033825454 88-89 23.459172097717165 25.57437066580932 25.687446858217537 25.279010378255972 90-91 23.665482316590214 25.36759953612243 25.78669321720038 25.18022493008697 92-93 23.67456165373254 25.4704969700343 25.826058840179883 25.028882536053278 94-95 23.66818533683792 25.36550248306601 25.72421232869188 25.24209985140419 96-97 23.373963570104827 25.373458972517742 25.762855978401173 25.489721478976264 98-99 23.317542452106466 25.43933302598666 25.65493952362242 25.588184998284447 100-101 23.371545372188383 25.425738455645792 25.78331261978643 25.4194035523794 102-103 23.171098779817072 25.360448672270188 25.84761371883722 25.62083882907552 104-105 23.24093769785137 25.407804969861598 25.770066362713255 25.58119096957378 106-107 23.256937189502203 25.313221260267234 25.772850459025005 25.656991091205562 108-109 23.168059924808368 25.309853311504053 25.794091228167826 25.727995535519753 110-111 23.101899455415236 25.588343425288773 25.74243249814712 25.567324621148874 112-113 23.03840918852986 25.60325726147916 25.761374617660294 25.596958932330676 114-115 23.022502928533527 25.628650596930157 25.70287551050226 25.645970964034053 116-117 22.811754134006325 25.43167309071122 25.757391557172287 25.999181218110166 118-119 22.92502855293122 25.281730188623282 25.8216268451382 25.971614413307297 120-121 22.75732946256467 25.36888991744834 25.969754981515226 25.90402563847177 122-123 22.66487283981856 25.514171976679762 25.75655098949154 26.064404194010137 124-125 22.468571704775606 25.377430655619264 25.730098403492768 26.42389923611236 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 39.0 1 43.5 2 52.5 3 51.5 4 52.0 5 58.5 6 141.0 7 341.5 8 484.5 9 593.5 10 588.5 11 511.5 12 545.0 13 577.5 14 672.5 15 743.0 16 808.5 17 894.0 18 917.0 19 981.5 20 1048.5 21 1127.0 22 1223.5 23 1366.5 24 1568.5 25 1847.5 26 2372.0 27 3043.0 28 3738.0 29 4650.5 30 5872.0 31 7246.5 32 9041.5 33 11152.0 34 13286.5 35 15583.5 36 18368.0 37 21293.5 38 23787.5 39 26358.0 40 29324.5 41 31794.5 42 34347.0 43 38071.5 44 42074.0 45 46337.5 46 49576.0 47 52944.0 48 57299.0 49 60564.0 50 61912.0 51 62460.5 52 62822.5 53 62312.0 54 61943.5 55 60271.0 56 56269.0 57 51612.0 58 47517.0 59 43012.5 60 36641.0 61 30345.0 62 25017.0 63 19285.0 64 14175.0 65 10749.0 66 8184.5 67 6050.0 68 4466.0 69 3350.0 70 2628.5 71 2011.5 72 1498.0 73 1182.0 74 931.5 75 681.5 76 490.0 77 340.5 78 245.0 79 196.0 80 151.5 81 133.5 82 132.5 83 121.0 84 104.0 85 100.0 86 90.0 87 76.0 88 67.0 89 66.5 90 69.0 91 59.0 92 57.0 93 55.0 94 51.0 95 48.0 96 32.5 97 24.5 98 21.0 99 7.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.33007409273566024 2 0.0 3 0.0 4 0.01882162010939975 5 0.1717381290137837 6 0.044014761423148835 7 0.02262988565682694 8 0.007836238722590557 9 0.0057856341970528415 10-11 0.001537953394153287 12-13 0.05529308631360627 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 3.295614416042758E-4 92-93 4.760331934283984E-4 94-95 1.4647175182412258E-4 96-97 4.760331934283984E-4 98-99 3.6617937956030646E-5 100-101 0.0 102-103 0.0 104-105 3.6617937956030646E-5 106-107 1.830896897801532E-4 108-109 4.760331934283984E-4 110-111 5.12651131384429E-4 112-113 6.957408211645823E-4 114-115 4.760331934283984E-4 116-117 5.858870072964903E-4 118-119 3.295614416042758E-4 120-121 2.197076277361839E-4 122-123 0.0020139865875816857 124-125 1.0985381386809195E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1365451.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.48049000119578 #Duplication Level Percentage of deduplicated Percentage of total 1 83.72099650496217 55.65812871038284 2 8.93045326921631 11.87401818540562 3 2.9186296008846853 5.820957779964249 4 1.3573053294790038 3.609372935399946 5 0.7765362789607096 2.581225616450661 6 0.5014717423424033 2.0002852291605824 7 0.34039931218388614 1.5840939149038331 8 0.2576616277148875 1.3703577011993122 9 0.18896141705114133 1.1306022837192167 >10 0.9547483373906632 10.970416722027018 >50 0.04127766472054914 1.8126739142759924 >100 0.011008510717488184 1.1622387198036173 >500 2.2016175044459394E-4 0.09799110672357443 >1k 3.302426256668909E-4 0.3276371805836018 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1896 0.1388552207292682 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1433 0.10494701018198382 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.323587591206129E-5 2 0.0 0.0 0.0 0.0 7.323587591206129E-5 3 0.0 0.0 0.0 0.0 7.323587591206129E-5 4 0.0 0.0 0.0 0.0 7.323587591206129E-5 5 0.0 0.0 0.0 0.0 7.323587591206129E-5 6 0.0 0.0 0.0 0.0 7.323587591206129E-5 7 0.0 0.0 0.0 0.0 7.323587591206129E-5 8 0.0 0.0 0.0 0.0 1.4647175182412258E-4 9 0.0 0.0 0.0 0.0 2.1970762773618386E-4 10-11 0.0 0.0 0.0 0.0 2.1970762773618386E-4 12-13 0.0 0.0 0.0 0.0 2.1970762773618386E-4 14-15 0.0 0.0 0.0 0.0 3.661793795603064E-4 16-17 0.0 0.0 0.0 0.0 4.3941525547236773E-4 18-19 0.0 0.0 0.0 0.0 5.12651131384429E-4 20-21 0.0 0.0 0.0 1.4647175182412258E-4 5.492690693404596E-4 22-23 0.0 0.0 0.0 2.9294350364824517E-4 7.32358759120613E-4 24-25 0.0 0.0 0.0 6.957408211645822E-4 8.788305109447355E-4 26-27 0.0 0.0 0.0 0.0012816278284610726 8.788305109447355E-4 28-29 0.0 0.0 0.0 0.0036251758576470337 8.788305109447355E-4 30-31 0.0 0.0 0.0 0.013804962609423554 8.788305109447355E-4 32-33 0.0 0.0 0.0 0.03068583200715368 9.886843248128273E-4 34-35 0.0 0.0 0.0 0.049763777682245644 0.0010985381386809194 36-37 0.0 0.0 0.0 0.0799369585580149 0.0010985381386809194 38-39 0.0 0.0 0.0 0.13021338737164498 0.00113515607663695 40-41 0.0 0.0 0.0 0.1893879751085905 0.0011717740145929807 42-43 0.0 0.0 0.0 0.24215442370323065 0.0012083919525490113 44-45 0.0 0.0 0.0 0.29821648671391354 0.001245009890505042 46-47 0.0 0.0 0.0 0.3660329078084823 0.001245009890505042 48-49 0.0 0.0 0.0 0.43377609302713904 0.0013182457664171032 50-51 0.0 0.0 0.0 0.5074513841946726 0.0013914816423291644 52-53 0.0 0.0 0.0 0.5805407883549099 0.0013914816423291644 54-55 0.0 0.0 0.0 0.6661169093581535 0.001428099580285195 56-57 0.0 0.0 0.0 0.7556111497226923 0.0014647175182412257 58-59 0.0 0.0 0.0 0.8546992898317113 0.0014647175182412257 60-61 0.0 0.0 0.0 0.9564971573494765 0.0014647175182412257 62-63 0.0 0.0 0.0 1.069500113881787 0.0014647175182412257 64-65 0.0 0.0 0.0 1.181990419282713 0.0014647175182412257 66-67 0.0 0.0 0.0 1.308212451417151 0.0015379533941532872 68-69 0.0 0.0 0.0 1.4447607420551891 0.0015379533941532872 70-71 0.0 0.0 0.0 1.5899508660508506 0.0016111892700653484 72-73 0.0 0.0 0.0 1.7307102195538324 0.001940750711669624 74-75 0.0 0.0 0.0 1.8711033936772539 0.0019773686496256547 76-77 0.0 0.0 0.0 2.046063901231168 0.0019773686496256547 78-79 0.0 0.0 0.0 2.2362208530368353 0.0019773686496256547 80-81 0.0 0.0 0.0 2.4334816848059724 0.002050604525537716 82-83 0.0 0.0 0.0 2.6303397192575932 0.0023069300912299307 84-85 0.0 0.0 0.0 2.84817983215802 0.0023435480291859614 86-87 0.0 0.0 0.0 3.0820586018831873 0.0023435480291859614 88-89 0.0 0.0 0.0 3.3481611570096623 0.0023435480291859614 90-91 0.0 0.0 0.0 3.633012096369624 0.0023435480291859614 92-93 0.0 0.0 0.0 3.9162884643974776 0.0024167839050980226 94-95 0.0 0.0 0.0 4.194511556987399 0.0024167839050980226 96-97 0.0 0.0 0.0 4.503640189212209 0.0024534018430540532 98-99 0.0 0.0 0.0 4.854586506582807 0.002490019781010084 100-101 0.0 0.0 0.0 5.233508928551812 0.002490019781010084 102-103 0.0 0.0 0.0 5.625870133750681 0.002563255656922145 104-105 0.0 0.0 0.0 6.0182313389495485 0.002563255656922145 106-107 0.0 0.0 0.0 6.438495412870912 0.002563255656922145 108-109 0.0 0.0 0.0 6.891276215697231 0.0026364915328342064 110-111 0.0 0.0 0.0 7.388950610457643 0.00285619916057039 112-113 0.0 0.0 0.0 7.890433270765483 0.0029294350364824514 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1885 0.0 75.463776 1 GTATCAA 3100 0.0 46.145126 2 GTACATG 6355 0.0 41.287815 1 TACATGG 6650 0.0 39.526943 2 TCAACGC 3780 0.0 38.78998 5 ACATGGG 6735 0.0 38.408592 3 CAACGCA 3890 0.0 37.363342 6 AACGCAG 4000 0.0 36.32253 7 ATCAACG 4020 0.0 36.029358 4 ATGGGGG 3475 0.0 34.99062 5 CATGGGG 6030 0.0 34.59609 4 TATCAAC 4235 0.0 34.059498 3 ACGCAGA 4915 0.0 29.315035 8 CGCAGAG 5195 0.0 27.620405 9 TATACCG 155 6.74036E-6 26.91799 5 GAGTACT 2785 0.0 25.32309 12-13 ATACCGT 195 1.4508605E-6 24.43773 6 GTACTTT 3030 0.0 23.560642 14-15 GTGGTAT 990 0.0 23.545197 1 GAGTACA 4310 0.0 23.297266 1 >>END_MODULE