##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921200_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2991085 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.597982337512978 31.0 27.0 31.0 7.0 34.0 2 26.406312425089894 31.0 26.0 31.0 7.0 34.0 3 26.244972978033054 31.0 26.0 31.0 7.0 34.0 4 30.03186602854817 35.0 30.0 37.0 7.0 37.0 5 29.762088004854427 35.0 30.0 37.0 7.0 37.0 6 30.05534613693693 35.0 30.0 37.0 2.0 37.0 7 29.960719605093136 35.0 30.0 37.0 2.0 37.0 8 29.62877818584226 35.0 30.0 37.0 2.0 37.0 9 31.219855336775787 37.0 30.0 39.0 2.0 39.0 10 30.555508786945204 37.0 30.0 39.0 2.0 39.0 11 30.992662528814794 37.0 30.0 39.0 2.0 39.0 12 30.682895337310708 37.0 30.0 39.0 2.0 39.0 13 30.687456224079224 37.0 30.0 39.0 2.0 39.0 14 31.749947928594473 38.0 31.0 40.0 2.0 41.0 15 31.397847603795945 38.0 30.0 40.0 2.0 41.0 16 31.314586512920897 38.0 30.0 40.0 2.0 41.0 17 31.615697313850994 38.0 30.0 40.0 2.0 41.0 18 31.66140113035905 38.0 31.0 40.0 2.0 41.0 19 31.36870533602355 38.0 30.0 40.0 2.0 41.0 20 31.232148200402197 38.0 30.0 40.0 2.0 41.0 21 31.176219331780942 38.0 30.0 40.0 2.0 41.0 22 30.430720624790002 37.0 27.0 40.0 2.0 41.0 23 30.515896071158124 37.0 29.0 40.0 2.0 41.0 24 30.15525102095059 37.0 27.0 40.0 2.0 41.0 25 29.664408734623056 37.0 27.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 283019.0 3 19.0 4 2394.0 5 13237.0 6 15311.0 7 13307.0 8 11265.0 9 10423.0 10 9808.0 11 9293.0 12 9026.0 13 8701.0 14 8518.0 15 8806.0 16 9297.0 17 10185.0 18 11660.0 19 14233.0 20 17908.0 21 22345.0 22 27023.0 23 32049.0 24 36335.0 25 41630.0 26 46156.0 27 51293.0 28 56492.0 29 66582.0 30 77986.0 31 92195.0 32 115007.0 33 144108.0 34 184186.0 35 235890.0 36 309647.0 37 407667.0 38 578084.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.4450475047983 17.216706090961598 11.820365677753962 25.517880726486137 2 15.698529731508918 18.83321146323727 39.52360945997387 25.944649345279945 3 19.32605361384005 22.560532159376304 29.228641082990077 28.884773143793574 4 13.399603449255881 14.864066016002461 35.29943593498708 36.43689459975458 5 14.155998480686257 36.24021339938425 34.617550213586625 14.986237906342867 6 35.00298221237364 34.025338106656214 16.49290487544917 14.478774805520972 7 30.244641733528677 30.823447518644354 19.86776267090518 19.064148076921793 8 26.992169568739527 34.317857134498794 20.065475925795287 18.624497370966388 9 26.777437451540848 15.532305935195211 18.62091977688478 39.069336836379165 10 15.734274735631807 27.78683643826026 32.82759372370235 23.651295102405584 11 36.590903163637265 22.21453939717761 21.52709745024572 19.667459988939406 12 23.692623940179978 24.001166228327982 29.228029067438626 23.078180764053418 13 29.106958546161664 20.705554138278874 25.05947268168549 25.128014633873967 14 22.600855326732805 20.02624829887617 25.561028130820183 31.81186824357084 15 24.666521336749923 27.63409359603276 22.61586494481921 25.083520122398106 16 24.465308688629303 26.829942847205736 24.479621968878646 24.225126495286318 17 23.747329005338145 26.872890252846915 25.375661665871235 24.004119075943706 18 23.657793079832853 26.713020925292795 25.970255961648558 23.658930033225793 19 24.742667576632947 26.02733175794585 26.18800255601994 23.041998109401266 20 24.964062719958054 25.516187742570374 25.953821723671993 23.565927813799583 21 25.349447371553847 25.28340349032716 25.552059967175357 23.815089170943633 22 24.25927721477935 24.66189446092018 26.782873554379407 24.29595476992106 23 24.498087714358892 25.134000432011373 25.952381111606726 24.415530742023 24 24.359813693463554 25.32184019499995 25.90245990163068 24.41588620990581 25 24.101629321813984 25.106180164185016 26.442244876229783 24.34994563777122 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 789.0 1 789.0 2 848.5 3 908.0 4 908.0 5 908.0 6 1282.0 7 1656.0 8 1656.0 9 1656.0 10 2286.5 11 2917.0 12 2917.0 13 2917.0 14 5087.0 15 7257.0 16 7257.0 17 7257.0 18 13209.0 19 19161.0 20 19161.0 21 19161.0 22 30911.5 23 42662.0 24 42662.0 25 42662.0 26 62731.5 27 82801.0 28 82801.0 29 82801.0 30 109403.0 31 136005.0 32 136005.0 33 136005.0 34 168137.5 35 200270.0 36 200270.0 37 200270.0 38 238875.5 39 277481.0 40 277481.0 41 277481.0 42 310357.0 43 343233.0 44 343233.0 45 343233.0 46 371299.5 47 399366.0 48 399366.0 49 399366.0 50 406225.0 51 413084.0 52 413084.0 53 413084.0 54 392221.5 55 371359.0 56 371359.0 57 371359.0 58 329492.0 59 287625.0 60 287625.0 61 287625.0 62 242119.5 63 196614.0 64 196614.0 65 196614.0 66 155124.5 67 113635.0 68 113635.0 69 113635.0 70 85360.5 71 57086.0 72 57086.0 73 57086.0 74 40143.0 75 23200.0 76 23200.0 77 23200.0 78 16274.5 79 9349.0 80 9349.0 81 9349.0 82 6308.5 83 3268.0 84 3268.0 85 3268.0 86 2166.5 87 1065.0 88 1065.0 89 1065.0 90 653.0 91 241.0 92 241.0 93 241.0 94 139.0 95 37.0 96 37.0 97 37.0 98 26.5 99 16.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032295972866033563 2 0.052255285289451815 3 0.013439939018784153 4 0.009862641817266978 5 0.0087259305569718 6 5.683556301475886E-4 7 0.003309835728506545 8 0.002072826415832382 9 0.005482960196717913 10 0.0028752108348642715 11 0.00959518034425635 12 0.008257872979203199 13 0.007221459771287008 14 0.013874563912426427 15 0.006318777299876132 16 0.028584944928011075 17 0.03657535643420364 18 0.02129661978847141 19 0.016649476694911715 20 0.015312169329858563 21 0.021697811997987353 22 0.005182066039580955 23 0.014142025385437056 24 0.010531295499793553 25 0.4625077522036318 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2991085.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.18727267067547 #Duplication Level Percentage of deduplicated Percentage of total 1 73.5262823589801 39.106624282881505 2 12.283752445990627 13.066785815279605 3 5.442389205453888 8.683975159512505 4 2.826009448472486 6.012309404232452 5 1.6376396481337807 4.355079325080022 6 1.0404272406331967 3.320249240493379 7 0.7126703819608362 2.6533495750765805 8 0.504268030055737 2.1456512970943082 9 0.3558754230127152 1.7035238844512337 >10 1.5834073571815888 14.054509369555756 >50 0.06174158049548538 2.2137462639249628 >100 0.024371217320918726 2.111813385037517 >500 8.418672229214071E-4 0.31150751166254426 >1k 3.2379508564718795E-4 0.2608754857175673 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3373073650531497E-4 2 0.0 0.0 0.0 0.0 1.3373073650531497E-4 3 0.0 0.0 0.0 0.0 1.3373073650531497E-4 4 0.0 0.0 0.0 0.0 1.3373073650531497E-4 5 0.0 0.0 0.0 0.0 1.3373073650531497E-4 6 0.0 0.0 0.0 0.0 1.671634206316437E-4 7 0.0 0.0 0.0 0.0 1.671634206316437E-4 8 0.0 0.0 0.0 0.0 2.3402878888430118E-4 9 0.0 0.0 0.0 3.343268412632874E-5 2.3402878888430118E-4 10 0.0 0.0 0.0 3.343268412632874E-5 2.3402878888430118E-4 11 0.0 0.0 0.0 3.343268412632874E-5 2.3402878888430118E-4 12 0.0 0.0 0.0 3.343268412632874E-5 4.346248936422736E-4 13 0.0 0.0 0.0 3.343268412632874E-5 4.6805757776860235E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1150 0.0 12.229015 1 GTATCAA 2745 0.0 11.700434 1 GGACCGT 190 0.0 11.495446 6 GACCGTC 125 1.844819E-8 11.395485 7 GTATTAA 350 0.0 11.131236 1 GTATACG 115 8.797797E-7 10.741703 1 CCGTCCG 90 9.5592055E-5 10.551376 9 CTTACGC 85 6.619785E-4 10.055008 3 TCTACAC 470 0.0 9.900499 3 CTATACT 280 0.0 9.835225 4 CTCTATA 185 6.493792E-10 9.756645 2 GTATTAG 275 0.0 9.675044 1 GTCTAAG 355 0.0 9.63611 1 GTATAAA 445 0.0 9.395509 1 TATACAG 455 0.0 9.183176 5 TCTATAC 335 0.0 9.071185 3 CGCCCTA 105 4.5018183E-4 9.046154 10 TATGCCG 105 4.512364E-4 9.044037 5 TACGGTT 105 4.5131182E-4 9.043885 4 GTCTAAC 200 2.6466296E-9 9.027162 1 >>END_MODULE