##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921199_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2419292 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.506485368446636 31.0 28.0 31.0 16.0 34.0 2 27.317944671416267 31.0 27.0 31.0 10.0 34.0 3 27.075503907754833 31.0 27.0 31.0 10.0 34.0 4 31.03142696292965 35.0 32.0 37.0 16.0 37.0 5 30.702410043930207 35.0 31.0 37.0 10.0 37.0 6 31.104709559656296 35.0 32.0 37.0 15.0 37.0 7 31.058954024565864 35.0 32.0 37.0 11.0 37.0 8 30.668791944089428 35.0 31.0 37.0 10.0 37.0 9 32.35914143476687 37.0 32.0 39.0 10.0 39.0 10 31.706681128197836 37.0 31.0 39.0 10.0 39.0 11 32.17632596643977 37.0 32.0 39.0 10.0 39.0 12 31.87377381481855 37.0 32.0 39.0 8.0 39.0 13 31.89632669392533 37.0 32.0 39.0 8.0 39.0 14 33.02144057021641 38.0 32.0 40.0 8.0 41.0 15 32.664223252091936 38.0 32.0 40.0 2.0 41.0 16 32.58900289836861 38.0 32.0 40.0 2.0 41.0 17 32.91114383877597 38.0 32.0 40.0 2.0 41.0 18 32.95987090438029 38.0 32.0 40.0 2.0 41.0 19 32.666575593190075 38.0 32.0 40.0 2.0 41.0 20 32.53483043799591 38.0 32.0 40.0 2.0 41.0 21 32.493328626722196 38.0 32.0 40.0 2.0 41.0 22 31.7195861433841 38.0 30.0 40.0 2.0 41.0 23 31.82806788101643 38.0 31.0 40.0 2.0 41.0 24 31.470492606927976 38.0 30.0 40.0 2.0 41.0 25 30.963819993617967 38.0 30.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 171766.0 3 8.0 4 1504.0 5 8302.0 6 9745.0 7 8695.0 8 7485.0 9 7009.0 10 6576.0 11 6338.0 12 6234.0 13 5903.0 14 6154.0 15 6251.0 16 6665.0 17 7282.0 18 8413.0 19 10409.0 20 13102.0 21 16403.0 22 20000.0 23 23982.0 24 27681.0 25 31361.0 26 35548.0 27 39860.0 28 44586.0 29 52702.0 30 62278.0 31 74094.0 32 93321.0 33 118621.0 34 151927.0 35 197261.0 36 261048.0 37 348675.0 38 522103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03025268527986 17.053351653508862 12.291318907917963 25.625076753293314 2 16.02867617714384 19.30803317569845 38.79989330179257 25.86339734536514 3 19.442573789582955 22.65311361716852 28.9428960383044 28.96141655494413 4 13.902876307492356 15.276851675396719 34.57914485876416 36.241127158346764 5 14.521395663200451 35.786843263823 33.84687885608696 15.844882216889584 6 34.53666755122809 33.22247381243495 17.0885693996308 15.152289236706157 7 30.24625092850981 30.911016414937343 19.723925150432024 19.118807506120827 8 26.738027596144427 33.59085105266051 20.259493537462628 19.411627813732434 9 27.19292407651832 15.6727224174942 18.692854010093697 38.44149949589378 10 16.16633177814438 27.59943006258647 32.29380794498046 23.940430214288696 11 36.03802178886283 22.361570775772478 21.58088724672741 20.019520188637284 12 24.08534934374164 24.11362440385715 28.580794537456804 23.220231714944404 13 29.017653962168843 20.723015877280844 24.973409719331475 25.28592044121884 14 23.234810792486684 20.15750928622662 25.310750112137516 31.296929809149184 15 25.007357998888857 27.24026263922326 22.613445461520147 25.138933900367732 16 24.68264800628812 26.688329972475007 24.301341848702247 24.327680172534627 17 24.00075092024946 26.544741366691394 25.164594606440875 24.289913106618272 18 23.848943899697243 26.49364942406368 25.88271579162355 23.774690884615527 19 25.08412817578696 25.66082992135359 26.021526891251 23.23351501160845 20 25.525201876699878 25.244292200632763 25.473402049751808 23.757103872915554 21 25.806532966642248 25.062428992189346 25.1626461293198 23.96839191184861 22 24.649474713277982 24.37508138172213 26.533521002168115 24.441922902831774 23 25.052813480563398 24.708233942014726 25.566520180744064 24.672432396677817 24 24.732254510654215 24.996165763054492 25.560987104148623 24.710592622142666 25 24.290396889370065 24.770753832743424 26.335371123184746 24.60347815470176 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 851.0 1 851.0 2 930.5 3 1010.0 4 1010.0 5 1010.0 6 1175.0 7 1340.0 8 1340.0 9 1340.0 10 1801.5 11 2263.0 12 2263.0 13 2263.0 14 3252.5 15 4242.0 16 4242.0 17 4242.0 18 7673.0 19 11104.0 20 11104.0 21 11104.0 22 19016.0 23 26928.0 24 26928.0 25 26928.0 26 42994.0 27 59060.0 28 59060.0 29 59060.0 30 81381.0 31 103702.0 32 103702.0 33 103702.0 34 129109.0 35 154516.0 36 154516.0 37 154516.0 38 186174.5 39 217833.0 40 217833.0 41 217833.0 42 248299.0 43 278765.0 44 278765.0 45 278765.0 46 305369.0 47 331973.0 48 331973.0 49 331973.0 50 339839.0 51 347705.0 52 347705.0 53 347705.0 54 329185.5 55 310666.0 56 310666.0 57 310666.0 58 275710.5 59 240755.0 60 240755.0 61 240755.0 62 201734.5 63 162714.0 64 162714.0 65 162714.0 66 127112.5 67 91511.0 68 91511.0 69 91511.0 70 68169.0 71 44827.0 72 44827.0 73 44827.0 74 31171.5 75 17516.0 76 17516.0 77 17516.0 78 12105.5 79 6695.0 80 6695.0 81 6695.0 82 4542.0 83 2389.0 84 2389.0 85 2389.0 86 1540.5 87 692.0 88 692.0 89 692.0 90 448.5 91 205.0 92 205.0 93 205.0 94 115.0 95 25.0 96 25.0 97 25.0 98 15.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034266223341374254 2 0.05195734950555782 3 0.01459104564475888 4 0.010457604952192626 5 0.009382910372125398 6 5.786816969592757E-4 7 0.003844099844086617 8 0.0016947106839521643 9 0.006572170701180345 10 0.0032654181471273415 11 0.010664276986820938 12 0.008225546978206847 13 0.007233521211990946 14 0.015996415480231407 15 0.006448167480403358 16 0.031538152484280525 17 0.03827566081316352 18 0.022113907705229464 19 0.015045724120941168 20 0.01508705852786683 21 0.022485917367560428 22 0.005662813748815769 23 0.016616431584116347 24 0.012276318856921776 25 0.4667067885976558 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2419292.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.90882856625127 #Duplication Level Percentage of deduplicated Percentage of total 1 69.27341121020893 31.80261159448911 2 12.772657791025694 11.727555137271843 3 6.111223787900763 8.416773756261984 4 3.485675617403735 6.400931374278006 5 2.133449739236545 4.8972089166662025 6 1.3944118513268804 3.8409488779988883 7 0.9713825908837083 3.121652578598481 8 0.7149411746157319 2.625768945631036 9 0.513597393881655 2.1220789237007693 >10 2.505621119557835 19.248553189633412 >50 0.09543155989025065 2.9773796769310703 >100 0.02642460854782194 2.0250982932699038 >500 0.0010256374065536916 0.3446681428781588 >1k 7.459181138568424E-4 0.44877059239111766 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.8934084847963786E-4 2 0.0 0.0 0.0 0.0 2.8934084847963786E-4 3 0.0 0.0 0.0 0.0 2.8934084847963786E-4 4 0.0 4.1334406925662546E-5 0.0 0.0 2.8934084847963786E-4 5 0.0 8.266881385132509E-5 0.0 0.0 2.8934084847963786E-4 6 0.0 8.266881385132509E-5 0.0 0.0 3.3067525540530037E-4 7 0.0 8.266881385132509E-5 0.0 0.0 3.3067525540530037E-4 8 0.0 1.2400322077698765E-4 0.0 0.0 3.3067525540530037E-4 9 0.0 1.2400322077698765E-4 0.0 0.0 3.3067525540530037E-4 10 0.0 1.2400322077698765E-4 0.0 0.0 4.133440692566255E-4 11 0.0 1.2400322077698765E-4 0.0 0.0 4.133440692566255E-4 12 0.0 1.2400322077698765E-4 0.0 0.0 9.506913592902387E-4 13 0.0 1.2400322077698765E-4 0.0 0.0 0.0010746945800672262 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATTG 80 2.8783355E-5 11.870788 5 CTTAGAC 170 1.8189894E-12 11.730889 3 GGTATCA 1475 0.0 11.466029 1 GTATAGA 245 0.0 11.246489 1 GTCTTAC 120 1.2737837E-7 11.084902 1 ACGATTC 115 8.8650813E-7 10.735099 8 CCCCTAG 125 2.2372478E-7 10.641505 1 GTATCAA 2990 0.0 10.263994 1 GTCCTAG 225 0.0 10.134768 1 GTATCGC 75 0.0026571993 10.12932 6 ACCGTGC 160 6.215487E-9 10.089961 8 GTGTAGA 350 0.0 9.772812 1 CGACGAT 100 2.76208E-4 9.498004 10 TAGGCTG 220 1.6370905E-11 9.49663 5 GTATTAG 145 1.7036637E-6 9.173712 1 TAACCTG 145 1.7151851E-6 9.16916 5 TCGCGCA 115 1.1150169E-4 9.083921 18 CCGTATG 105 4.5097098E-4 9.04441 9 GTACTAC 190 1.05574145E-8 9.001274 1 TACGATT 95 0.0018308085 8.996435 7 >>END_MODULE