##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921198_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2124675 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.829474154870745 31.0 30.0 33.0 26.0 34.0 2 30.079702072081613 31.0 30.0 34.0 26.0 34.0 3 30.219486274371373 31.0 30.0 34.0 26.0 34.0 4 33.91877816607246 35.0 35.0 37.0 30.0 37.0 5 33.51725087366303 35.0 35.0 37.0 28.0 37.0 6 33.50523491828162 37.0 35.0 37.0 28.0 37.0 7 33.36990645628155 37.0 35.0 37.0 28.0 37.0 8 33.32534011084048 37.0 35.0 37.0 27.0 37.0 9 34.74375563321449 39.0 35.0 39.0 27.0 39.0 10 34.615402355654396 38.0 35.0 39.0 27.0 39.0 11 34.654098626848814 39.0 35.0 39.0 27.0 39.0 12 34.5208264793439 38.0 35.0 39.0 27.0 39.0 13 34.49959593820231 38.0 35.0 39.0 27.0 39.0 14 35.502793133067414 39.0 36.0 41.0 27.0 41.0 15 35.49466718439291 39.0 36.0 41.0 27.0 41.0 16 35.4796182945627 39.0 36.0 41.0 27.0 41.0 17 35.45021568004518 39.0 36.0 41.0 27.0 41.0 18 35.39588407638816 39.0 36.0 41.0 26.0 41.0 19 35.43054678950898 39.0 36.0 41.0 26.0 41.0 20 35.36522009248473 39.0 35.0 41.0 26.0 41.0 21 35.296613364396904 39.0 35.0 41.0 26.0 41.0 22 35.215261628249024 39.0 35.0 41.0 25.0 41.0 23 35.093936719733605 39.0 35.0 41.0 25.0 41.0 24 35.021256898113826 39.0 35.0 41.0 25.0 41.0 25 34.88677515384706 39.0 35.0 41.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57823.0 3 9.0 4 873.0 5 7768.0 6 8748.0 7 6638.0 8 5307.0 9 4509.0 10 4031.0 11 3815.0 12 3520.0 13 3431.0 14 3418.0 15 3410.0 16 3430.0 17 3720.0 18 4041.0 19 4676.0 20 5957.0 21 7732.0 22 10045.0 23 12259.0 24 14912.0 25 17023.0 26 19440.0 27 22476.0 28 25666.0 29 31671.0 30 40676.0 31 51845.0 32 66299.0 33 86629.0 34 114253.0 35 151406.0 36 207454.0 37 318032.0 38 791733.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.2202159397374 17.895313139003903 9.059178946535221 31.82529197472348 2 15.424382552625696 20.516926118112185 34.39594290891549 29.66274842034664 3 18.95387075448777 23.12475162117214 26.850669469227395 31.070708155112698 4 14.103087559578556 15.849155410257895 32.103499152561135 37.94425787760242 5 15.547959980519657 36.415475756488185 31.97550262202767 16.061061640964482 6 35.32276861612497 33.66204515202235 16.11423751597981 14.90094871587287 7 31.14508659937148 30.3852035305264 19.079866087376434 19.389843782725684 8 28.371698527051436 34.053663261761606 18.26142742431217 19.313210786874784 9 27.569440032004895 15.464059209055502 17.949474625530964 39.01702613340864 10 17.213079647475496 27.816819042912442 30.376269311777094 24.593831997834965 11 36.92851941856103 21.966204318854782 21.067019487515477 20.038256775068707 12 24.64720486662666 23.844776259898573 27.817054373021755 23.69096450045301 13 29.555254015836013 20.24798425717918 24.524639576099794 25.67212215088502 14 23.700500819943127 19.590188563371104 24.650429186772776 32.058881429912994 15 25.34347213453873 27.054018210861265 21.818430905642202 25.7840787489578 16 25.778594430549422 26.029457862003465 23.248450812411576 24.943496895035537 17 24.435360702225044 26.250744231470698 24.633414522221045 24.680480544083213 18 24.554149271153495 25.78229211283118 25.357127728173435 24.30643088784189 19 25.71506032262437 25.0419377795852 25.03897248203877 24.20402941575166 20 25.74247826138115 24.78882652640992 24.995822890559733 24.472872321649195 21 26.011299211634743 24.35864123261388 24.885520402034274 24.744539153717106 22 25.70336639721369 24.265499429324485 24.673326508760162 25.35780766470166 23 25.42457681165559 24.25788778831287 24.87163737942103 25.445898020610503 24 25.161762830062308 24.85440521594814 24.872197126841733 25.11163482714782 25 25.32621698634116 24.502593656681054 24.84733002601437 25.323859330963415 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 332.0 1 332.0 2 347.5 3 363.0 4 363.0 5 363.0 6 542.0 7 721.0 8 721.0 9 721.0 10 997.5 11 1274.0 12 1274.0 13 1274.0 14 1703.0 15 2132.0 16 2132.0 17 2132.0 18 4479.5 19 6827.0 20 6827.0 21 6827.0 22 12356.0 23 17885.0 24 17885.0 25 17885.0 26 29467.5 27 41050.0 28 41050.0 29 41050.0 30 57680.5 31 74311.0 32 74311.0 33 74311.0 34 95416.0 35 116521.0 36 116521.0 37 116521.0 38 145196.0 39 173871.0 40 173871.0 41 173871.0 42 200622.5 43 227374.0 44 227374.0 45 227374.0 46 253761.0 47 280148.0 48 280148.0 49 280148.0 50 294795.0 51 309442.0 52 309442.0 53 309442.0 54 301614.5 55 293787.0 56 293787.0 57 293787.0 58 263070.5 59 232354.0 60 232354.0 61 232354.0 62 199867.0 63 167380.0 64 167380.0 65 167380.0 66 133055.5 67 98731.0 68 98731.0 69 98731.0 70 73770.5 71 48810.0 72 48810.0 73 48810.0 74 34187.5 75 19565.0 76 19565.0 77 19565.0 78 13572.5 79 7580.0 80 7580.0 81 7580.0 82 5239.0 83 2898.0 84 2898.0 85 2898.0 86 1923.5 87 949.0 88 949.0 89 949.0 90 620.5 91 292.0 92 292.0 93 292.0 94 179.0 95 66.0 96 66.0 97 66.0 98 39.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10500429477449492 2 0.0 3 0.04250061774153694 4 0.05732641462811959 5 0.07102262699001023 6 0.005600856601597892 7 2.8239613117300293E-4 8 0.004377140033181545 9 0.0 10 0.0 11 0.003953545836422041 12 0.0 13 0.0011295845246920117 14 0.06386859166696084 15 0.026262840199089272 16 6.11858284208173E-4 17 0.0 18 0.004000611858284208 19 0.004659536164354548 20 0.0 21 0.013131420099544636 22 0.0 23 0.0014119806558650146 24 0.0053655264922870555 25 0.18468706978714391 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2124675.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.940861106056104 #Duplication Level Percentage of deduplicated Percentage of total 1 63.10149415683897 25.20328013702916 2 15.497312401593302 12.379520042983977 3 7.378182693073995 8.840729104775264 4 4.090408651820402 6.534977753174756 5 2.4562168749885607 4.9051708525134625 6 1.6115167941310273 3.8619221066678504 7 1.139871303676142 3.1869208993235523 8 0.8272414265562205 2.643258793540617 9 0.6316997979178505 2.270757050042451 >10 3.0544272926664933 21.028297734858455 >50 0.15033534056977368 4.0711111634605714 >100 0.058804688131879695 4.025995069554366 >500 0.0014220445916311609 0.41462310430299676 >1k 0.00106653344372337 0.633436187772489 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2686 0.126419334721781 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.41320437243343E-5 2 0.0 0.0 0.0 0.0 9.41320437243343E-5 3 0.0 0.0 0.0 0.0 9.41320437243343E-5 4 0.0 0.0 0.0 0.0 9.41320437243343E-5 5 0.0 0.0 0.0 0.0 9.41320437243343E-5 6 0.0 0.0 0.0 0.0 9.41320437243343E-5 7 0.0 0.0 0.0 0.0 9.41320437243343E-5 8 0.0 0.0 0.0 0.0 9.41320437243343E-5 9 0.0 0.0 0.0 0.0 9.41320437243343E-5 10 0.0 0.0 0.0 0.0 9.41320437243343E-5 11 0.0 0.0 0.0 0.0 9.41320437243343E-5 12 0.0 0.0 0.0 0.0 4.2359419675950437E-4 13 0.0 0.0 0.0 0.0 6.589243060703402E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGTAC 40 0.005265157 14.256026 3 GGTATCA 1150 0.0 12.906394 1 TATAGCG 75 1.4809968E-5 12.66516 5 CGAATCG 70 1.09825334E-4 12.205934 16 AATCGTA 70 1.09825334E-4 12.205934 18 GCGAATC 130 2.6338967E-9 11.6876135 15 ACCGACC 90 7.481787E-6 11.608636 8 GGATCGT 70 0.0015012122 10.848953 6 CTTATAC 220 0.0 10.379269 1 ATCGCTC 110 6.06283E-6 10.361427 8 GTATCAA 2590 0.0 10.35923 1 ACTATAC 75 0.0026153454 10.148618 1 CGTACAC 85 6.5694767E-4 10.063077 3 GAACCGC 215 1.0913936E-11 9.713597 6 TACACTG 490 0.0 9.692724 5 CTCTTAT 160 6.4841515E-8 9.514329 1 GCTTTAA 160 6.4841515E-8 9.514329 1 ATAGCAC 400 0.0 9.504018 3 GTTACAC 150 2.6325506E-7 9.504018 3 TCGGAAC 160 6.593473E-8 9.504017 3 >>END_MODULE