##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921196_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2135756 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.83775674749363 31.0 30.0 33.0 26.0 34.0 2 30.083900501742708 31.0 30.0 34.0 26.0 34.0 3 30.21155834280695 31.0 30.0 34.0 26.0 34.0 4 33.917764950677885 35.0 35.0 37.0 30.0 37.0 5 33.507446075300734 35.0 35.0 37.0 28.0 37.0 6 33.49828163891381 37.0 35.0 37.0 28.0 37.0 7 33.36138866050241 37.0 35.0 37.0 28.0 37.0 8 33.31045166208125 37.0 35.0 37.0 27.0 37.0 9 34.7226195314446 39.0 35.0 39.0 27.0 39.0 10 34.59967571201954 38.0 35.0 39.0 27.0 39.0 11 34.63828826888465 39.0 35.0 39.0 27.0 39.0 12 34.50519628646718 38.0 35.0 39.0 27.0 39.0 13 34.48420044237263 38.0 35.0 39.0 27.0 39.0 14 35.47714579755365 39.0 36.0 41.0 27.0 41.0 15 35.46557659208261 39.0 36.0 41.0 27.0 41.0 16 35.459882589584204 39.0 36.0 41.0 27.0 41.0 17 35.426819355769105 39.0 36.0 41.0 27.0 41.0 18 35.38342020343148 39.0 35.0 41.0 27.0 41.0 19 35.42011353356844 39.0 35.0 41.0 26.0 41.0 20 35.35362700608122 39.0 35.0 41.0 26.0 41.0 21 35.28888505990385 39.0 35.0 41.0 26.0 41.0 22 35.20751761905386 39.0 35.0 41.0 25.0 41.0 23 35.08177666362637 39.0 35.0 41.0 25.0 41.0 24 35.00918691086435 39.0 35.0 41.0 25.0 41.0 25 34.87785589739652 39.0 35.0 41.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 57427.0 3 7.0 4 955.0 5 7969.0 6 8749.0 7 6777.0 8 5311.0 9 4540.0 10 4169.0 11 3828.0 12 3585.0 13 3402.0 14 3411.0 15 3386.0 16 3460.0 17 3787.0 18 4091.0 19 4820.0 20 6100.0 21 7853.0 22 9885.0 23 12508.0 24 14943.0 25 17332.0 26 20061.0 27 22489.0 28 26176.0 29 32141.0 30 40644.0 31 52879.0 32 67541.0 33 87450.0 34 116025.0 35 152385.0 36 210378.0 37 320125.0 38 789167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.78755510143821 18.278936896696372 9.508311206829884 31.425196795035536 2 15.255862561079075 20.46741294417527 35.10700660562349 29.169717889122165 3 19.001833346292603 22.67246055307664 27.239759913138545 31.085946187492215 4 13.949886510303083 15.810040031763062 32.505276275382926 37.73479718255093 5 15.465199903485981 36.48126761322242 32.05722437869102 15.99630810460058 6 35.04880362522486 34.04852362361416 15.979101953362406 14.923570797798568 7 30.90259032762684 30.760626345836805 18.854942495691215 19.48184083084514 8 27.92007944857966 34.4802528045564 18.264979367623393 19.334688379240546 9 27.190137824732787 15.974437154806074 18.32891959568415 38.50650542477699 10 17.086221459754768 27.991774341263703 30.509056277964337 24.412947921017196 11 36.62828482225298 22.221842440905508 21.179998239479485 19.969874497362028 12 24.406111934134795 24.2449512022909 27.87565620791888 23.473280655655422 13 29.155940536111437 20.402902961488937 24.756736509422918 25.684419992976704 14 23.33360972796678 20.167954244039596 24.90905913861378 31.58937688937984 15 25.180633740153425 27.437829585155903 22.02748143083278 25.354055243857893 16 25.499378673761118 26.68982476446257 23.281426606247724 24.529369955528583 17 24.13211059690339 26.726789015224583 25.016340817958604 24.12475956991342 18 24.14928305477102 26.354620063978185 25.599280432714277 23.89681644853652 19 25.236675626917087 25.50201828040917 25.63705413935944 23.6242519533143 20 25.40116942197517 25.186163587975408 25.480157845746426 23.932509144303 21 25.69089838915634 24.639197898097436 25.30149761962625 24.368406093119976 22 25.356688685411626 24.703805116314783 25.057028986457254 24.88247721181633 23 24.952112683969936 24.756208963344374 25.253272514530074 25.03840583815562 24 24.570777068155 25.32359110744854 25.35898900604948 24.746642818346977 25 24.825548866249363 24.94368648461561 25.336603104969896 24.894161544165133 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 461.0 1 461.0 2 455.0 3 449.0 4 449.0 5 449.0 6 631.5 7 814.0 8 814.0 9 814.0 10 1074.5 11 1335.0 12 1335.0 13 1335.0 14 1769.5 15 2204.0 16 2204.0 17 2204.0 18 4697.5 19 7191.0 20 7191.0 21 7191.0 22 13767.0 23 20343.0 24 20343.0 25 20343.0 26 33877.0 27 47411.0 28 47411.0 29 47411.0 30 64995.0 31 82579.0 32 82579.0 33 82579.0 34 105797.5 35 129016.0 36 129016.0 37 129016.0 38 158133.5 39 187251.0 40 187251.0 41 187251.0 42 212867.0 43 238483.0 44 238483.0 45 238483.0 46 261989.5 47 285496.0 48 285496.0 49 285496.0 50 296053.0 51 306610.0 52 306610.0 53 306610.0 54 292592.5 55 278575.0 56 278575.0 57 278575.0 58 250513.5 59 222452.0 60 222452.0 61 222452.0 62 189013.5 63 155575.0 64 155575.0 65 155575.0 66 123246.0 67 90917.0 68 90917.0 69 90917.0 70 68093.5 71 45270.0 72 45270.0 73 45270.0 74 32399.5 75 19529.0 76 19529.0 77 19529.0 78 14022.0 79 8515.0 80 8515.0 81 8515.0 82 6009.5 83 3504.0 84 3504.0 85 3504.0 86 2410.5 87 1317.0 88 1317.0 89 1317.0 90 846.5 91 376.0 92 376.0 93 376.0 94 225.5 95 75.0 96 75.0 97 75.0 98 41.5 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10258662506391181 2 0.0 3 0.040360415702917374 4 0.05623301538190692 5 0.06325628957615008 6 0.0025283787099275386 7 1.4046548388486324E-4 8 0.001638763978656738 9 0.0 10 0.0 11 0.001123723871078906 12 0.0 13 2.809309677697265E-4 14 0.052768200112746966 15 0.02322362666896406 16 9.364365592324216E-5 17 0.0 18 0.0013110111829253903 19 0.0012641893549637693 20 0.0 21 0.00781924526959072 22 0.0 23 6.08683763501074E-4 24 0.0016855858066183592 25 0.16373593238178893 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2135756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.4591638773264 #Duplication Level Percentage of deduplicated Percentage of total 1 62.02358024825505 25.09422197522656 2 15.641713267558705 12.657012808286163 3 7.54244245272471 9.154827456902783 4 4.289405641876938 6.941830632041099 5 2.5879137957284764 5.235241418088612 6 1.809633655750404 4.392975878155853 7 1.2264011885840216 3.473341666778816 8 0.892781339522597 2.8896949217890984 9 0.6631713714869402 2.4148223277967276 >10 3.1699858511406767 21.402690774943988 >50 0.11660597241689259 3.1438005536533518 >100 0.034495491179156394 2.276971524255764 >500 8.180041517230118E-4 0.23942421290313454 >1k 0.0010517196236438599 0.6831438491779942 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3140 0.1470205397994902 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3410913980810542E-4 2 0.0 0.0 0.0 0.0 2.809309677697265E-4 3 0.0 0.0 0.0 0.0 2.809309677697265E-4 4 0.0 0.0 0.0 0.0 2.809309677697265E-4 5 0.0 0.0 0.0 0.0 2.809309677697265E-4 6 0.0 0.0 0.0 0.0 4.2139645165458975E-4 7 0.0 0.0 0.0 0.0 4.2139645165458975E-4 8 0.0 0.0 0.0 0.0 4.2139645165458975E-4 9 0.0 0.0 0.0 0.0 4.2139645165458975E-4 10 0.0 0.0 0.0 0.0 4.2139645165458975E-4 11 0.0 0.0 0.0 0.0 4.2139645165458975E-4 12 0.0 0.0 0.0 0.0 4.2139645165458975E-4 13 0.0 0.0 0.0 0.0 4.2139645165458975E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1085 0.0 13.239661 1 ATTTGCG 100 1.9438558E-6 11.393468 16 CCTAGAC 120 1.269982E-7 11.087107 3 ACGATAC 60 0.005862006 11.087107 3 CGATACT 60 0.005862006 11.087107 4 CTCCTAG 355 0.0 10.987152 1 GTATCAA 2475 0.0 10.416546 1 TTGCGCG 120 1.5354781E-6 10.28577 18 GACTGAT 170 1.5770638E-9 10.052118 7 AGGTCGT 85 6.635647E-4 10.052118 6 TTCGCAG 105 4.104549E-5 9.952737 10 CTACACG 115 1.0225696E-5 9.916418 4 CTTATAC 240 0.0 9.909653 1 TATACAC 290 0.0 9.830932 3 GTGTACG 100 2.7175611E-4 9.513267 1 TGCGCGC 120 1.6812995E-5 9.509251 19 CTAGACA 110 6.812484E-5 9.503234 4 TAGACAC 180 4.1836756E-9 9.499894 5 ACCGACC 110 6.849252E-5 9.49856 8 AGTTCGC 100 2.7601194E-4 9.498559 8 >>END_MODULE