Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921192_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2605063 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 3421 | 0.1313212002934286 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4540 | 0.0 | 10.737935 | 1 |
GTATAGA | 245 | 0.0 | 10.472658 | 1 |
TTAGACA | 295 | 0.0 | 9.656801 | 4 |
GTTCTAT | 240 | 1.8189894E-12 | 9.502968 | 1 |
TCAAGAC | 355 | 0.0 | 9.362289 | 3 |
GTGTAGG | 490 | 0.0 | 9.30903 | 1 |
ACAGCGC | 175 | 2.6888301E-8 | 9.224897 | 8 |
GTCTTAA | 330 | 0.0 | 9.214999 | 1 |
TGCACCG | 155 | 4.2897773E-7 | 9.189536 | 5 |
CATGGGT | 945 | 0.0 | 9.1441555 | 4 |
TAGGTCC | 135 | 6.888522E-6 | 9.1441555 | 4 |
AGACCCG | 115 | 1.116349E-4 | 9.082991 | 5 |
GTCCTAA | 210 | 6.6393113E-10 | 9.050446 | 1 |
GTTATAT | 180 | 4.1998646E-8 | 8.975025 | 1 |
ACGGTCC | 85 | 0.0074619055 | 8.937616 | 8 |
CGTAGAC | 85 | 0.0074630803 | 8.937446 | 3 |
TCTATAC | 170 | 1.6966624E-7 | 8.937446 | 3 |
GGTATCA | 2135 | 0.0 | 8.902078 | 1 |
CCTATAC | 150 | 2.7182105E-6 | 8.862967 | 3 |
CTTAGAC | 270 | 1.8189894E-12 | 8.792626 | 3 |