##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921192_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2605063 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.036642875815286 31.0 28.0 31.0 10.0 34.0 2 26.81518911442833 31.0 27.0 31.0 10.0 34.0 3 26.61962762512845 31.0 26.0 31.0 10.0 34.0 4 30.457011980132535 35.0 30.0 37.0 10.0 37.0 5 30.206188871439963 35.0 30.0 37.0 10.0 37.0 6 30.520054985234523 35.0 31.0 37.0 10.0 37.0 7 30.454379030372777 35.0 31.0 37.0 8.0 37.0 8 30.118468536077632 35.0 30.0 37.0 8.0 37.0 9 31.71885747100934 37.0 31.0 39.0 2.0 39.0 10 31.04342006316162 37.0 30.0 39.0 2.0 39.0 11 31.49900328706062 37.0 31.0 39.0 2.0 39.0 12 31.198759108704856 37.0 30.0 39.0 2.0 39.0 13 31.20007078523629 37.0 30.0 39.0 2.0 39.0 14 32.27455919492158 38.0 31.0 40.0 2.0 41.0 15 31.92518990903483 38.0 31.0 40.0 2.0 41.0 16 31.847481615607762 38.0 31.0 40.0 2.0 41.0 17 32.16356802119565 38.0 31.0 40.0 2.0 41.0 18 32.21679974726139 38.0 31.0 40.0 2.0 41.0 19 31.927131128882486 38.0 31.0 40.0 2.0 41.0 20 31.788658470063872 38.0 31.0 40.0 2.0 41.0 21 31.735475111350475 38.0 31.0 40.0 2.0 41.0 22 30.984905163521958 38.0 29.0 40.0 2.0 41.0 23 31.074020474744756 38.0 30.0 40.0 2.0 41.0 24 30.6981973180687 37.0 30.0 40.0 2.0 41.0 25 30.206009605141986 37.0 28.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 215461.0 3 10.0 4 1723.0 5 10371.0 6 12376.0 7 10630.0 8 9102.0 9 8547.0 10 7996.0 11 7666.0 12 7404.0 13 7009.0 14 6937.0 15 7286.0 16 7642.0 17 8447.0 18 10010.0 19 11923.0 20 15096.0 21 18791.0 22 22991.0 23 27191.0 24 31268.0 25 35684.0 26 40503.0 27 44518.0 28 49925.0 29 58708.0 30 69422.0 31 81898.0 32 102846.0 33 128691.0 34 163686.0 35 211158.0 36 276746.0 37 362720.0 38 512681.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.42340286719165 17.549366376988125 12.116693694029264 24.910537061790965 2 15.565564527527362 19.482237339380195 39.87330930565541 25.07888882743703 3 19.150589497277398 23.92288947919454 29.340336632910724 27.58618439061734 4 13.233342380840682 15.633094527768105 35.64769083170139 35.48587225968982 5 13.830401891888261 37.29277239563039 34.14459047798204 14.732235234499319 6 33.587992552926046 34.34195121014952 17.34066524634844 14.729390990575997 7 29.573961198844977 31.882352760526594 19.92645607979197 18.61722996083646 8 26.829009879401895 33.97038636231025 20.53169731011249 18.668906448175367 9 27.499666973396646 15.692866167069178 18.819822818330245 37.987644041203936 10 15.969403090785342 28.361757855851643 32.550483326289104 23.11835572707391 11 35.61697845847427 22.84386069780093 21.902477096940512 19.636683746784282 12 23.751697323095456 25.121456736064484 28.924036321658512 22.202809619181547 13 28.777882922915392 21.477658151190177 25.179884562155813 24.56457436373862 14 22.839593148187323 21.00935123391215 25.88088454525944 30.270171072641084 15 24.99895389016576 27.913742197844133 22.908423353163993 24.178880558826116 16 24.197964249180572 27.340291708009374 24.864989816638047 23.59675422617201 17 23.402098278060247 27.34931107049047 25.583823597179766 23.664767054269518 18 23.240792361434274 27.02870605436504 26.48825019159383 23.242251392606857 19 24.508709712468722 26.319529789554796 26.684150976284073 22.48760952169241 20 25.125650713476443 25.698627949110836 26.154890443635036 23.02083089377768 21 25.409259501009807 25.49614891378635 25.775515845895118 23.319075739308726 22 24.329286878568738 25.062324514360167 26.8892178398212 23.7191707672499 23 24.4436288079071 25.42844593852677 26.039738221623978 24.08818703194215 24 24.064967488230153 25.755187927896316 26.27662012731361 23.903224456559922 25 23.81257978549032 25.29698521726722 26.844486268218088 24.04594872902437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1689.0 1 1689.0 2 1657.5 3 1626.0 4 1626.0 5 1626.0 6 2063.0 7 2500.0 8 2500.0 9 2500.0 10 3162.0 11 3824.0 12 3824.0 13 3824.0 14 5769.5 15 7715.0 16 7715.0 17 7715.0 18 13563.0 19 19411.0 20 19411.0 21 19411.0 22 31358.5 23 43306.0 24 43306.0 25 43306.0 26 62495.5 27 81685.0 28 81685.0 29 81685.0 30 106184.0 31 130683.0 32 130683.0 33 130683.0 34 157523.0 35 184363.0 36 184363.0 37 184363.0 38 214886.0 39 245409.0 40 245409.0 41 245409.0 42 274021.5 43 302634.0 44 302634.0 45 302634.0 46 329661.0 47 356688.0 48 356688.0 49 356688.0 50 358025.5 51 359363.0 52 359363.0 53 359363.0 54 334629.5 55 309896.0 56 309896.0 57 309896.0 58 272335.5 59 234775.0 60 234775.0 61 234775.0 62 196859.0 63 158943.0 64 158943.0 65 158943.0 66 123987.0 67 89031.0 68 89031.0 69 89031.0 70 65725.5 71 42420.0 72 42420.0 73 42420.0 74 29990.5 75 17561.0 76 17561.0 77 17561.0 78 12499.5 79 7438.0 80 7438.0 81 7438.0 82 5131.5 83 2825.0 84 2825.0 85 2825.0 86 1880.5 87 936.0 88 936.0 89 936.0 90 613.5 91 291.0 92 291.0 93 291.0 94 167.0 95 43.0 96 43.0 97 43.0 98 25.5 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03500875026822768 2 0.053703115817160654 3 0.014817300003877067 4 0.011285715546994448 5 0.00990379119430125 6 4.990282384725436E-4 7 0.003416424094158184 8 0.0018041790160161194 9 0.006372206737418635 10 0.0036083580320322387 11 0.010748300520947095 12 0.008675413991907297 13 0.007600583939812588 14 0.014586979278428199 15 0.006679301038017124 16 0.03128523187347101 17 0.0392696836890317 18 0.022840138607012575 19 0.016966960108066486 20 0.016199224356570265 21 0.023147232907611063 22 0.005719631348646847 23 0.016007290418696207 24 0.012053451298490671 25 0.4672823651481749 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2605063.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.87726659455895 #Duplication Level Percentage of deduplicated Percentage of total 1 74.59365794930812 40.934960535475234 2 12.54940590549424 13.773541869582798 3 5.159946427096044 8.494912670801744 4 2.6067302476695025 5.722009229658399 5 1.4393765218745505 3.9494524560429354 6 0.908553411506365 2.991535666717849 7 0.5900974557713081 2.2668054777993123 8 0.4221911446456376 1.8534956798864526 9 0.29600482652763005 1.4619542200769637 >10 1.3471285935494375 12.654143520756056 >50 0.05944420258577965 2.209304710875289 >100 0.025439300540716702 2.3816734247535036 >500 0.0010842929092732033 0.42528799724816396 >1k 9.397205213614568E-4 0.880922540325327 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3421 0.1313212002934286 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.67735751496221E-5 2 0.0 0.0 0.0 0.0 7.67735751496221E-5 3 0.0 0.0 0.0 0.0 7.67735751496221E-5 4 0.0 0.0 0.0 0.0 7.67735751496221E-5 5 0.0 0.0 0.0 0.0 7.67735751496221E-5 6 0.0 0.0 0.0 0.0 1.9193393787405525E-4 7 0.0 0.0 0.0 3.838678757481105E-5 1.9193393787405525E-4 8 0.0 0.0 0.0 3.838678757481105E-5 1.9193393787405525E-4 9 0.0 0.0 0.0 3.838678757481105E-5 1.9193393787405525E-4 10 0.0 0.0 0.0 3.838678757481105E-5 2.303207254488663E-4 11 0.0 0.0 0.0 3.838678757481105E-5 2.303207254488663E-4 12 0.0 0.0 0.0 3.838678757481105E-5 9.596696893702763E-4 13 0.0 0.0 0.0 3.838678757481105E-5 0.0012283772023939537 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4540 0.0 10.737935 1 GTATAGA 245 0.0 10.472658 1 TTAGACA 295 0.0 9.656801 4 GTTCTAT 240 1.8189894E-12 9.502968 1 TCAAGAC 355 0.0 9.362289 3 GTGTAGG 490 0.0 9.30903 1 ACAGCGC 175 2.6888301E-8 9.224897 8 GTCTTAA 330 0.0 9.214999 1 TGCACCG 155 4.2897773E-7 9.189536 5 CATGGGT 945 0.0 9.1441555 4 TAGGTCC 135 6.888522E-6 9.1441555 4 AGACCCG 115 1.116349E-4 9.082991 5 GTCCTAA 210 6.6393113E-10 9.050446 1 GTTATAT 180 4.1998646E-8 8.975025 1 ACGGTCC 85 0.0074619055 8.937616 8 CGTAGAC 85 0.0074630803 8.937446 3 TCTATAC 170 1.6966624E-7 8.937446 3 GGTATCA 2135 0.0 8.902078 1 CCTATAC 150 2.7182105E-6 8.862967 3 CTTAGAC 270 1.8189894E-12 8.792626 3 >>END_MODULE