##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921188_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1968915 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.93589210301105 31.0 30.0 33.0 24.0 34.0 2 29.24549967875708 31.0 30.0 34.0 25.0 34.0 3 29.418144003169257 31.0 30.0 34.0 25.0 34.0 4 33.046841026656814 35.0 33.0 37.0 27.0 37.0 5 32.466078017588366 35.0 33.0 37.0 25.0 37.0 6 32.40191933120526 35.0 33.0 37.0 23.0 37.0 7 32.24445798828289 35.0 33.0 37.0 22.0 37.0 8 32.18006871805029 35.0 33.0 37.0 19.0 37.0 9 33.497176363631745 38.0 34.0 39.0 18.0 39.0 10 33.35458463163722 38.0 33.0 39.0 17.0 39.0 11 33.375708448561774 38.0 34.0 39.0 17.0 39.0 12 33.24018964759779 38.0 33.0 39.0 17.0 39.0 13 33.195090697160616 38.0 33.0 39.0 17.0 39.0 14 34.11560072425676 39.0 33.0 41.0 17.0 41.0 15 34.10106987858795 39.0 33.0 41.0 17.0 41.0 16 34.071837534885965 39.0 33.0 41.0 16.0 41.0 17 34.03725452850936 39.0 33.0 41.0 16.0 41.0 18 33.98910465916507 39.0 33.0 41.0 11.0 41.0 19 34.0176645512884 39.0 34.0 41.0 10.0 41.0 20 33.95382685387637 39.0 34.0 41.0 10.0 41.0 21 33.88053369495382 39.0 34.0 41.0 10.0 41.0 22 33.77608429007854 39.0 34.0 41.0 2.0 41.0 23 33.65202611590647 39.0 34.0 41.0 2.0 41.0 24 33.56053714863262 39.0 34.0 41.0 2.0 41.0 25 33.42618244058276 39.0 33.0 41.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 89904.0 3 6.0 4 1504.0 5 12081.0 6 13206.0 7 9786.0 8 7590.0 9 6335.0 10 5525.0 11 5072.0 12 4703.0 13 4300.0 14 4198.0 15 4109.0 16 4241.0 17 4374.0 18 4913.0 19 5628.0 20 6954.0 21 9091.0 22 11333.0 23 13654.0 24 16092.0 25 18121.0 26 20188.0 27 22634.0 28 25610.0 29 30754.0 30 38639.0 31 48786.0 32 61767.0 33 79587.0 34 104021.0 35 136041.0 36 185432.0 37 280769.0 38 671967.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.528113879003556 19.072394509405186 9.171581087951195 32.22791052364006 2 14.58168585236031 21.000906590685734 34.858183314160335 29.55922424279362 3 17.64434785657413 23.890355942787778 28.15881376455064 30.30648243608746 4 13.369813616177487 16.713308781642233 32.94369762290371 36.97317997927657 5 14.677864400284415 37.37975472938048 32.53980476137473 15.402576108960373 6 33.60549200107475 35.09008155617533 16.55864126203064 14.745785180719281 7 29.18816596177591 32.01934314373321 19.867507287200787 18.9249836072901 8 27.37284149769255 34.939827573771794 18.854788753998545 18.832542174537114 9 26.872263700543453 15.942861496266952 18.88973538524049 38.29513941794911 10 16.738026091646834 28.662617717656403 31.271172925472317 23.328183265224446 11 35.45885392038301 22.638737009555317 21.988713213950675 19.913695856110998 12 23.59550390597026 25.052148169366895 28.624126356271418 22.72822156839143 13 28.556880579708082 21.519077351127788 25.123257043568003 24.80078502559612 14 22.803519085428075 20.831097315559024 25.601387144117442 30.763996454895455 15 24.53668307705125 28.114488975950348 22.694693185414653 24.654134761583748 16 24.60033877558276 26.93067798288853 24.115793189442595 24.35319005208611 17 23.26488529069679 27.223105404568056 25.717536276785395 23.79447302794976 18 23.29743424086727 26.614900459760303 26.516670628366175 23.57099467100625 19 24.335107125932844 26.237485721367438 26.340794707166772 23.086612445532953 20 24.751533866970053 25.781205558490107 25.999045142415994 23.46821543212385 21 24.95692816552587 25.419340879031125 25.81638395696067 23.807346998482327 22 24.735926536354704 25.40199556597329 25.682156978766958 24.179920918905054 23 24.368807625556606 25.23718124207343 25.87242419825147 24.521586934118496 24 24.035529333845307 25.81016754941458 26.043095164085468 24.11120795265464 25 24.05510292751473 25.56352954224704 26.021923545374904 24.359443984863333 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 904.0 1 904.0 2 993.5 3 1083.0 4 1083.0 5 1083.0 6 1304.0 7 1525.0 8 1525.0 9 1525.0 10 1942.0 11 2359.0 12 2359.0 13 2359.0 14 3354.5 15 4350.0 16 4350.0 17 4350.0 18 8068.0 19 11786.0 20 11786.0 21 11786.0 22 20016.5 23 28247.0 24 28247.0 25 28247.0 26 42834.5 27 57422.0 28 57422.0 29 57422.0 30 76082.5 31 94743.0 32 94743.0 33 94743.0 34 113838.5 35 132934.0 36 132934.0 37 132934.0 38 156610.0 39 180286.0 40 180286.0 41 180286.0 42 201463.0 43 222640.0 44 222640.0 45 222640.0 46 240155.0 47 257670.0 48 257670.0 49 257670.0 50 265728.5 51 273787.0 52 273787.0 53 273787.0 54 259562.5 55 245338.0 56 245338.0 57 245338.0 58 217569.5 59 189801.0 60 189801.0 61 189801.0 62 161142.0 63 132483.0 64 132483.0 65 132483.0 66 103879.5 67 75276.0 68 75276.0 69 75276.0 70 54846.0 71 34416.0 72 34416.0 73 34416.0 74 24102.5 75 13789.0 76 13789.0 77 13789.0 78 9594.0 79 5399.0 80 5399.0 81 5399.0 82 3647.0 83 1895.0 84 1895.0 85 1895.0 86 1250.5 87 606.0 88 606.0 89 606.0 90 381.0 91 156.0 92 156.0 93 156.0 94 85.5 95 15.0 96 15.0 97 15.0 98 10.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09726168981393306 2 0.0 3 0.04438993049471409 4 0.05556359720963069 5 0.06978462757406999 6 0.004469466685966637 7 0.0026410484962530126 8 0.00370762577358596 9 7.618409123806766E-4 10 4.5710454742840594E-4 11 0.0032505212261575538 12 3.0473636495227067E-4 13 0.00314894243784013 14 0.05744280479350301 15 0.022652069794785453 16 0.0030473636495227064 17 0.0012697348539677945 18 0.003199731831998842 19 0.0032505212261575538 20 0.0017776287955549122 21 0.0056376227516170075 22 0.002539469707935589 23 0.00314894243784013 24 0.003199731831998842 25 0.17049999619079542 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1968915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.207032802156675 #Duplication Level Percentage of deduplicated Percentage of total 1 64.23674477948173 25.827689044523883 2 13.826420274727635 11.118386670447563 3 7.109177045229383 8.575167439616314 4 4.092289374980048 6.5815525254296015 5 2.6945897406875883 5.417072904609036 6 1.8004184507382817 4.343369022386531 7 1.32384098963999 3.7259402666706256 8 0.9131266910386399 2.9371291855292303 9 0.6965148244747408 2.520431495535987 >10 3.1421783507706613 21.005344186462253 >50 0.11478357372390934 3.0807205063365375 >100 0.04596949608327733 3.10597349755662 >500 0.0026733734486074413 0.7242159851643728 >1k 0.0012730349755273526 1.0370072697314432 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3980 0.20214178875167288 No Hit GGTATCAACGCAGAGTACTTTTTTT 2754 0.13987399151309224 No Hit TATCAACGCAGAGTACTTTTTTTTT 2641 0.1341347899731578 No Hit CTTATACACATCTCCGAGCCCACGA 2466 0.12524664599538324 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1270 0.0 14.159291 1 TATACAC 500 0.0 12.167339 3 CTTATAC 475 0.0 11.617639 1 AGATCGT 90 7.5231674E-6 11.602777 6 GTCGGAT 60 0.005831464 11.09482 19 TGCTACG 60 0.005876895 11.083259 10 TTGCGCG 60 0.005908095 11.075377 18 TACACCG 105 3.4684708E-6 10.856794 5 AGGACCG 90 9.520207E-5 10.555217 5 TAATGGA 245 0.0 10.475707 4 GTATCAA 2740 0.0 10.382551 1 GATCTAT 75 0.002614937 10.148741 1 TTATACA 600 0.0 10.13945 2 GACCGCG 75 0.002663928 10.12606 7 GTATTAT 95 1.6193067E-4 10.015205 1 GGACCGC 105 4.1382384E-5 9.945237 6 AACACCG 125 2.5713525E-6 9.879683 5 ACACCGT 125 2.5939953E-6 9.872908 6 AGGCCGA 135 6.5071436E-7 9.84478 6 AGTACTG 245 0.0 9.693566 5 >>END_MODULE