##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921183_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2412094 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.15486958634282 31.0 30.0 33.0 25.0 34.0 2 29.450855978249603 31.0 30.0 34.0 25.0 34.0 3 29.614976033272335 31.0 30.0 34.0 25.0 34.0 4 33.26277209760482 35.0 35.0 37.0 28.0 37.0 5 32.71856818183703 35.0 33.0 37.0 26.0 37.0 6 32.654926383465984 35.0 33.0 37.0 25.0 37.0 7 32.49761659371484 35.0 33.0 37.0 24.0 37.0 8 32.443648547693414 36.0 33.0 37.0 23.0 37.0 9 33.782341401288676 38.0 34.0 39.0 23.0 39.0 10 33.64918406994089 38.0 34.0 39.0 22.0 39.0 11 33.6742726444326 38.0 34.0 39.0 22.0 39.0 12 33.52940971620509 38.0 34.0 39.0 19.0 39.0 13 33.49753367820657 38.0 34.0 39.0 19.0 39.0 14 34.42809525665252 39.0 34.0 41.0 18.0 41.0 15 34.41032895069595 39.0 34.0 41.0 17.0 41.0 16 34.37732360347482 39.0 34.0 41.0 17.0 41.0 17 34.35100083164255 39.0 34.0 41.0 17.0 41.0 18 34.30500013681059 39.0 34.0 41.0 17.0 41.0 19 34.335770496506356 39.0 34.0 41.0 18.0 41.0 20 34.27252710715254 39.0 34.0 41.0 18.0 41.0 21 34.19954612050774 39.0 34.0 41.0 16.0 41.0 22 34.09783656855827 39.0 34.0 41.0 11.0 41.0 23 33.96489398837691 39.0 34.0 41.0 10.0 41.0 24 33.88226951354301 39.0 34.0 41.0 2.0 41.0 25 33.743920842222565 39.0 34.0 41.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 97674.0 3 4.0 4 1610.0 5 13106.0 6 14887.0 7 11013.0 8 8497.0 9 7289.0 10 6291.0 11 5727.0 12 5437.0 13 5101.0 14 4926.0 15 4889.0 16 4959.0 17 5322.0 18 5841.0 19 6616.0 20 8338.0 21 10970.0 22 13662.0 23 16552.0 24 19194.0 25 21702.0 26 24916.0 27 27469.0 28 31419.0 29 37543.0 30 47888.0 31 60483.0 32 76312.0 33 98197.0 34 128036.0 35 168316.0 36 229621.0 37 347556.0 38 834731.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.12953954865327 18.91718946984894 9.185165696586308 31.76810528491148 2 14.672562512074572 20.720046565349442 34.74433417603128 29.863056746544704 3 17.61111304656537 23.47454407609985 28.252931798462804 30.661411078871975 4 13.386016537509718 16.178328677820538 32.72786778620204 37.707786998467704 5 14.653725833944877 37.439542081697994 32.40867997117684 15.498052113180293 6 34.393391307953024 34.879673296779615 16.03395557582479 14.692979819442572 7 29.957574644454954 31.85989558047447 19.17175822066409 19.010771554406485 8 27.828383817989067 34.73339615843701 18.39437774747542 19.043842276098502 9 27.007063230778222 15.480485840164606 18.60398686770569 38.90846406135148 10 16.89377375026844 28.437181550513706 30.75058103427833 23.918463664939523 11 35.70178864458203 22.404616263556214 21.549348796058364 20.34424629580339 12 23.58309246278322 24.77542241480811 28.394409149930098 23.24707597247857 13 28.755917303276874 20.891055284548802 25.07423318631804 25.27879422585628 14 22.690287276793864 20.759830029832717 25.28202537274305 31.26785732063037 15 24.995946639110723 27.797389179454623 22.3238384477556 24.882825733679052 16 25.009048511214143 26.96485363385308 23.961494179723957 24.064603675208822 17 23.382501887404164 27.208304329566264 25.524586419064672 23.884607363964903 18 23.639528124862665 26.47361477681951 26.3022627751147 23.584594323203127 19 24.70492244380477 26.08295297706088 25.990747070990672 23.221377508143682 20 24.804790661460533 25.51556243589414 25.993003392169072 23.686643510476255 21 25.11791259873729 25.299549411349133 25.75693752290672 23.82560046700686 22 24.935935041594025 25.15073559134413 25.441116415596156 24.47221295146569 23 24.587208757567392 25.037251336446108 25.79388671779449 24.58165318819201 24 24.35405077875433 25.55355674746983 25.731956933540022 24.360435540235812 25 24.309627896527136 25.17606840162408 25.952683810261824 24.561619891586965 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1168.0 1 1168.0 2 1219.5 3 1271.0 4 1271.0 5 1271.0 6 1596.5 7 1922.0 8 1922.0 9 1922.0 10 2522.0 11 3122.0 12 3122.0 13 3122.0 14 4273.0 15 5424.0 16 5424.0 17 5424.0 18 10418.5 19 15413.0 20 15413.0 21 15413.0 22 24568.0 23 33723.0 24 33723.0 25 33723.0 26 50169.5 27 66616.0 28 66616.0 29 66616.0 30 86888.5 31 107161.0 32 107161.0 33 107161.0 34 130569.5 35 153978.0 36 153978.0 37 153978.0 38 181598.0 39 209218.0 40 209218.0 41 209218.0 42 236020.5 43 262823.0 44 262823.0 45 262823.0 46 290443.0 47 318063.0 48 318063.0 49 318063.0 50 328519.5 51 338976.0 52 338976.0 53 338976.0 54 322263.0 55 305550.0 56 305550.0 57 305550.0 58 272324.0 59 239098.0 60 239098.0 61 239098.0 62 204236.5 63 169375.0 64 169375.0 65 169375.0 66 133686.5 67 97998.0 68 97998.0 69 97998.0 70 72996.5 71 47995.0 72 47995.0 73 47995.0 74 34237.5 75 20480.0 76 20480.0 77 20480.0 78 14217.5 79 7955.0 80 7955.0 81 7955.0 82 5563.0 83 3171.0 84 3171.0 85 3171.0 86 2163.5 87 1156.0 88 1156.0 89 1156.0 90 773.5 91 391.0 92 391.0 93 391.0 94 217.5 95 44.0 96 44.0 97 44.0 98 23.5 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09651365162385878 2 0.0 3 0.03921903541072611 4 0.05522172850643466 5 0.0635547370873606 6 0.0049334727419412345 7 0.003855571134458276 8 0.004435979692333715 9 0.0010364438533489988 10 6.633240661433592E-4 11 0.004145775413395995 12 4.145775413395995E-4 13 0.004145775413395995 14 0.05464131994855922 15 0.021350743378989376 16 0.003938486642726196 17 0.0021143454608319578 18 0.004145775413395995 19 0.0041872331675299555 20 0.0028191272811092767 21 0.005721170070486474 22 0.0036897401179224357 23 0.004145775413395995 24 0.0041872331675299555 25 0.16918909462069057 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2412094.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.52368069417184 #Duplication Level Percentage of deduplicated Percentage of total 1 61.780017633534825 21.328736020604616 2 13.128689309163615 9.06501355285104 3 7.212632412120086 7.470198550814048 4 4.424094111434312 6.109440498564962 5 2.935103103541793 5.066528117557483 6 2.0903972688484282 4.330092470021522 7 1.515896890333559 3.6634038145014673 8 1.1609524732673073 3.206428199055167 9 0.8923040315277997 2.7725057519929193 >10 4.604921414241951 27.08892436566595 >50 0.18362700094666845 4.3105528579367896 >100 0.06772673753844695 3.832053704597424 >500 0.00206131431729793 0.5030887308470738 >1k 0.0014550454004455316 1.0248475876683014 >5k 1.2125378337046099E-4 0.2281857773212937 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5451 0.22598621778421568 No Hit GGTATCAACGCAGAGTACTTTTTTT 3772 0.15637864859329695 No Hit TATCAACGCAGAGTACTTTTTTTTT 3643 0.1510305983100161 No Hit CTTATACACATCTCCGAGCCCACGA 2841 0.11778147949458022 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2685 0.11131406984968246 No Hit GGTATCAACGCAGAGTACATGGGGG 2419 0.10028630725004911 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 4.145775413395995E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1945 0.0 13.205005 1 GTACTAG 85 3.8883027E-6 12.3102865 1 TTATACA 540 0.0 11.967013 2 CTTATAC 535 0.0 11.557236 1 TATACAC 570 0.0 11.170446 3 GAGCGCG 60 0.0058715227 11.084785 11 AAGACCG 185 5.456968E-12 10.781618 5 ACACCGT 100 2.417894E-5 10.442921 6 GTATAGA 150 2.3970642E-8 10.14666 1 TACGCTG 85 6.607942E-4 10.056804 5 GTATATA 250 0.0 9.892994 1 ACTATAC 125 2.5600948E-6 9.883345 3 CAATACC 135 6.418177E-7 9.854983 4 TTAGGGT 245 0.0 9.696958 4 GTATCAA 3660 0.0 9.694427 1 GTATTAG 180 4.090907E-9 9.512494 1 TACTATA 90 0.0011105381 9.503217 2 AAACCGT 100 2.775076E-4 9.493564 6 TAGCACA 375 0.0 9.376312 4 TATACAG 335 0.0 9.356329 5 >>END_MODULE