##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921179_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3481143 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.448307639186325 31.0 28.0 31.0 15.0 34.0 2 27.046938031560323 31.0 27.0 31.0 10.0 34.0 3 26.921162962854442 31.0 27.0 31.0 10.0 34.0 4 30.78074442790773 35.0 31.0 37.0 12.0 37.0 5 30.46035712982776 35.0 30.0 37.0 10.0 37.0 6 30.742009161933307 35.0 31.0 37.0 11.0 37.0 7 30.78240221674318 35.0 32.0 37.0 10.0 37.0 8 30.47218542875142 35.0 31.0 37.0 10.0 37.0 9 32.0777307912947 37.0 32.0 39.0 10.0 39.0 10 31.455889918914565 37.0 30.0 39.0 8.0 39.0 11 31.888426875885305 37.0 32.0 39.0 8.0 39.0 12 31.59148159096021 37.0 31.0 39.0 7.0 39.0 13 31.591496241320737 37.0 31.0 39.0 2.0 39.0 14 32.69386405557025 38.0 32.0 40.0 2.0 41.0 15 32.3524356798902 38.0 31.0 40.0 2.0 41.0 16 32.279765008217126 38.0 31.0 40.0 2.0 41.0 17 32.58889134976644 38.0 32.0 40.0 2.0 41.0 18 32.645203888492944 38.0 32.0 40.0 2.0 41.0 19 32.35515317813718 38.0 31.0 40.0 2.0 41.0 20 32.22827904512972 38.0 31.0 40.0 2.0 41.0 21 32.17771030951616 38.0 31.0 40.0 2.0 41.0 22 31.414059117939136 38.0 30.0 40.0 2.0 41.0 23 31.513562355812443 38.0 30.0 40.0 2.0 41.0 24 31.13936399625066 38.0 30.0 40.0 2.0 41.0 25 30.650943095414352 38.0 30.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 264883.0 3 10.0 4 2173.0 5 12441.0 6 14794.0 7 13056.0 8 11047.0 9 10299.0 10 9785.0 11 9407.0 12 9105.0 13 8939.0 14 9084.0 15 9134.0 16 9817.0 17 10650.0 18 12602.0 19 15083.0 20 19264.0 21 24267.0 22 29948.0 23 35105.0 24 40967.0 25 46402.0 26 52342.0 27 58966.0 28 65384.0 29 77531.0 30 90946.0 31 109054.0 32 136245.0 33 172766.0 34 221568.0 35 285242.0 36 374269.0 37 492266.0 38 716302.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1870963570664 17.946968771776064 12.373876624449537 25.492058246707998 2 15.400771849230738 20.09190569965937 39.79866277178255 24.70865967932734 3 18.589752982246864 23.636437812025864 30.345814511585523 27.42799469414175 4 13.483180606481266 15.890564126460536 36.01296011615611 34.6132951509021 5 13.64170189245357 36.97084471216745 34.83368276624461 14.553770629134375 6 33.27061405524659 34.827814036861696 17.468659511881235 14.432912396010481 7 29.02695278644464 31.633377985086526 21.122127380736586 18.217541847732257 8 25.630493984625463 35.40685649281258 20.730261872752134 18.232387649809827 9 26.754273195510525 16.11885055285306 19.400202761148343 37.72667349048807 10 15.218915710032885 28.639146370785994 33.739859002028986 22.402078917152128 11 35.23837322548079 22.94660828165463 22.467638205218226 19.347380287646352 12 23.005945677605 24.856960143045605 30.117862084181784 22.019232095167617 13 28.3336273204634 21.644136910285276 25.51005809453822 24.512177674713104 14 22.253662755035343 21.123613583114622 26.48598176487404 30.136741896975995 15 24.18015514805944 28.40373543529853 23.429350694196067 23.986758722445963 16 23.807383764132407 27.642479200441823 25.344714926660615 23.205422108765152 17 22.93668015291503 27.69474237472344 26.269562316209278 23.09901515615225 18 22.82918408668352 27.601208011306642 26.80768559985818 22.761922302151657 19 23.94622508534492 26.912108377277132 26.926243944259898 22.21542259311805 20 24.316737128352315 26.454405327794085 26.544762922644416 22.684094621209184 21 24.58482490082315 26.139014521036234 26.253110634728948 23.02304994341166 22 23.708624681838813 25.583491815429166 27.487862473929457 23.220021028802567 23 24.09404763922739 25.906598797512743 26.417255091694898 23.582098471564972 24 23.497434170720872 26.170223279722222 26.753862534065973 23.578480015490932 25 23.322956686444623 25.92127368435025 27.183554111212494 23.572215517992632 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1215.0 1 1215.0 2 1306.5 3 1398.0 4 1398.0 5 1398.0 6 1743.5 7 2089.0 8 2089.0 9 2089.0 10 2941.5 11 3794.0 12 3794.0 13 3794.0 14 6490.0 15 9186.0 16 9186.0 17 9186.0 18 17456.0 19 25726.0 20 25726.0 21 25726.0 22 43355.0 23 60984.0 24 60984.0 25 60984.0 26 90966.5 27 120949.0 28 120949.0 29 120949.0 30 157841.5 31 194734.0 32 194734.0 33 194734.0 34 235347.0 35 275960.0 36 275960.0 37 275960.0 38 318564.0 39 361168.0 40 361168.0 41 361168.0 42 396388.0 43 431608.0 44 431608.0 45 431608.0 46 454262.0 47 476916.0 48 476916.0 49 476916.0 50 475030.0 51 473144.0 52 473144.0 53 473144.0 54 433779.0 55 394414.0 56 394414.0 57 394414.0 58 342345.5 59 290277.0 60 290277.0 61 290277.0 62 238060.5 63 185844.0 64 185844.0 65 185844.0 66 142594.0 67 99344.0 68 99344.0 69 99344.0 70 72341.0 71 45338.0 72 45338.0 73 45338.0 74 31324.0 75 17310.0 76 17310.0 77 17310.0 78 11983.5 79 6657.0 80 6657.0 81 6657.0 82 4410.0 83 2163.0 84 2163.0 85 2163.0 86 1428.0 87 693.0 88 693.0 89 693.0 90 442.0 91 191.0 92 191.0 93 191.0 94 110.0 95 29.0 96 29.0 97 29.0 98 20.5 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03211588837344516 2 0.049035618473587554 3 0.013271503066665172 4 0.008905121105338103 5 0.0076124422352083785 6 6.607025336218593E-4 7 0.0037344056248192043 8 0.0018097504181816145 9 0.005745239422798776 10 0.002872619711399388 11 0.009795633215871914 12 0.008474228148628195 13 0.0076124422352083785 14 0.014305646162768951 15 0.006032501393938715 16 0.029329447253387753 17 0.037401508642420034 18 0.020453052345163644 19 0.016115396580950566 20 0.01516743207618877 21 0.021372290652811446 22 0.005831418014140758 23 0.015052527287732792 24 0.01140430025425557 25 0.45011078257917014 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3481143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.360611557926845 #Duplication Level Percentage of deduplicated Percentage of total 1 70.24873448998432 34.67520495596054 2 12.904814568539619 12.739790782895192 3 5.960994543190788 8.827150084360863 4 3.3415195061180785 6.597577854189201 5 2.0501309094559765 5.059785773227787 6 1.3656301572258094 4.044500383356824 7 0.9109305249006794 3.1474861457116585 8 0.6737202204076472 2.6604193678610186 9 0.48526297223290793 2.1557589368250247 >10 1.9790976046863589 15.579851122229266 >50 0.05655055756896702 1.886897368977674 >100 0.02094286911980481 1.828149994589192 >500 0.0011936261227907191 0.4309565543082486 >1k 4.774504462060769E-4 0.3664706755073905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 5.7452394227987763E-5 0.0 8 0.0 0.0 0.0 5.7452394227987763E-5 0.0 9 0.0 0.0 0.0 2.0108337979795718E-4 0.0 10 0.0 0.0 0.0 2.2980957691195105E-4 0.0 11 0.0 0.0 0.0 2.872619711399388E-4 0.0 12 0.0 0.0 0.0 2.872619711399388E-4 0.0 13 0.0 0.0 0.0 3.1598816825393266E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1640 0.0 11.934614 1 GTATCAA 3480 0.0 9.992793 1 GGACCGT 125 2.5838544E-6 9.876572 6 GTCCTAG 410 0.0 9.733084 1 GTCTTAG 425 0.0 9.613124 1 GTACTAG 230 3.6379788E-12 9.501344 1 GTATAGG 245 1.8189894E-12 9.307439 1 GTGTAGG 415 0.0 9.157922 1 CAGGACT 625 0.0 8.812307 4 CGTCTAT 120 1.7621377E-4 8.709565 1 TTATACT 465 0.0 8.577051 4 ACCGTCC 145 1.697757E-5 8.514285 8 GTGCTAA 335 0.0 8.508666 1 CCTACAC 410 0.0 8.338328 3 CTTAGAC 365 0.0 8.325637 3 TGAACCG 160 6.488486E-6 8.309257 5 GTATAAT 585 0.0 8.283222 1 GTCTATA 310 0.0 8.275364 1 GTATAAA 540 0.0 8.269689 1 GTACTAC 280 3.45608E-11 8.14401 1 >>END_MODULE