##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921179_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3481143 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.950077603821505 31.0 30.0 33.0 26.0 34.0 2 30.193469501252892 31.0 30.0 34.0 26.0 34.0 3 30.31623664985897 31.0 30.0 34.0 26.0 34.0 4 34.0257062120114 35.0 35.0 37.0 30.0 37.0 5 33.62946537961813 35.0 35.0 37.0 28.0 37.0 6 33.61254593677996 37.0 35.0 37.0 28.0 37.0 7 33.48174579441293 37.0 35.0 37.0 28.0 37.0 8 33.433830497626786 37.0 35.0 37.0 28.0 37.0 9 34.8660273364237 39.0 35.0 39.0 28.0 39.0 10 34.73894235312942 38.0 35.0 39.0 27.0 39.0 11 34.77695084631686 39.0 35.0 39.0 27.0 39.0 12 34.64927927407751 38.0 35.0 39.0 27.0 39.0 13 34.633951549821425 38.0 35.0 39.0 27.0 39.0 14 35.602267703452576 39.0 36.0 41.0 27.0 41.0 15 35.608907763915475 39.0 36.0 41.0 27.0 41.0 16 35.59477217683962 39.0 36.0 41.0 27.0 41.0 17 35.57676659648857 39.0 36.0 41.0 27.0 41.0 18 35.53041888827894 39.0 36.0 41.0 27.0 41.0 19 35.5849820016012 39.0 36.0 41.0 27.0 41.0 20 35.52259128682734 39.0 36.0 41.0 27.0 41.0 21 35.4570243164386 39.0 36.0 41.0 27.0 41.0 22 35.37523853515928 39.0 35.0 41.0 27.0 41.0 23 35.2567027553881 39.0 35.0 41.0 26.0 41.0 24 35.18757201298539 39.0 35.0 41.0 26.0 41.0 25 35.05609278331858 39.0 35.0 41.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 86222.0 3 9.0 4 1334.0 5 11896.0 6 13553.0 7 10409.0 8 8105.0 9 7089.0 10 6491.0 11 5948.0 12 5647.0 13 5342.0 14 5246.0 15 5272.0 16 5379.0 17 5689.0 18 6422.0 19 7524.0 20 9498.0 21 12246.0 22 15718.0 23 19561.0 24 23217.0 25 27773.0 26 31747.0 27 35838.0 28 42306.0 29 51832.0 30 65902.0 31 85638.0 32 110029.0 33 143941.0 34 191503.0 35 254176.0 36 348317.0 37 526029.0 38 1288295.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.080091691098076 19.131602949481334 9.519104804121268 31.269200555299324 2 14.47185593927052 21.164485342888817 36.291413481146854 28.07224523669381 3 17.82128366902493 24.124158471952324 28.279566925943232 29.774990933079515 4 13.103836790535784 16.768260610885804 34.257575714027034 35.87032688455138 5 14.203955530464437 37.82937362527437 33.36511562930096 14.601555214960236 6 33.601588502660434 35.75912076193891 16.67433684552834 13.96495388987232 7 29.431045086705865 32.1115198856006 19.99668499113939 18.46075003655415 8 26.838615082142027 35.879466045243895 18.876693313844928 18.40522555876915 9 26.928885139162627 15.968174820741348 19.073591633552542 38.029348406543484 10 15.967255582433701 29.257488129617197 31.983518057143872 22.79173823080523 11 35.526356233957806 22.8686418341566 22.100886081949294 19.504115849936298 12 23.277498224002862 25.072081210108287 29.43593526608933 22.21448529979952 13 28.507225115128143 21.469836871513515 25.3392800767339 24.683657936624435 14 22.327958169838457 21.032607383510978 26.28874009402129 30.350694352629276 15 24.33901883444354 28.57860748320898 22.85635806129814 24.226015621049342 16 24.224883751593953 27.73935307657902 24.64971792148683 23.386045250340192 17 23.00646655423233 27.70661819982689 26.142419314575697 23.14449593136507 18 22.90382685144701 27.569365883814985 26.733436099733588 22.793371165004423 19 24.133956788114332 26.852431447791503 26.576249061700935 22.437362702393226 20 24.307131307159747 26.487248584732082 26.358785031238302 22.84683507686987 21 24.49626001647914 25.992741823346826 26.33286830132695 23.17812985884708 22 24.39520582751125 25.882935576044996 26.082266657818998 23.639591938624758 23 24.00768258712213 25.954815103993862 26.21099709604871 23.826505212835297 24 23.59804653835105 26.2626544096524 26.47644355070382 23.662855501292732 25 23.73626746763154 26.006620736649033 26.394806312950664 23.86230548276876 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 616.0 1 616.0 2 687.5 3 759.0 4 759.0 5 759.0 6 1183.5 7 1608.0 8 1608.0 9 1608.0 10 2217.0 11 2826.0 12 2826.0 13 2826.0 14 4937.5 15 7049.0 16 7049.0 17 7049.0 18 14585.5 19 22122.0 20 22122.0 21 22122.0 22 38740.0 23 55358.0 24 55358.0 25 55358.0 26 84507.5 27 113657.0 28 113657.0 29 113657.0 30 147889.0 31 182121.0 32 182121.0 33 182121.0 34 220365.0 35 258609.0 36 258609.0 37 258609.0 38 300930.5 39 343252.0 40 343252.0 41 343252.0 42 380107.0 43 416962.0 44 416962.0 45 416962.0 46 445940.5 47 474919.0 48 474919.0 49 474919.0 50 481185.0 51 487451.0 52 487451.0 53 487451.0 54 450005.5 55 412560.0 56 412560.0 57 412560.0 58 361104.0 59 309648.0 60 309648.0 61 309648.0 62 256168.5 63 202689.0 64 202689.0 65 202689.0 66 155778.0 67 108867.0 68 108867.0 69 108867.0 70 79329.5 71 49792.0 72 49792.0 73 49792.0 74 34444.0 75 19096.0 76 19096.0 77 19096.0 78 13395.0 79 7694.0 80 7694.0 81 7694.0 82 5054.5 83 2415.0 84 2415.0 85 2415.0 86 1575.0 87 735.0 88 735.0 89 735.0 90 499.5 91 264.0 92 264.0 93 264.0 94 162.5 95 61.0 96 61.0 97 61.0 98 37.0 99 13.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09706582004818533 2 0.0 3 0.04196897398354506 4 0.055527739021350164 5 0.06512228885742412 6 0.0037056794277052106 7 1.7235718268396327E-4 8 0.0028438935142853943 9 0.0 10 0.0 11 0.0025279053460314617 12 0.0 13 6.319763365078654E-4 14 0.05547028662712219 15 0.02042432614804965 16 5.745239422798777E-4 17 0.0 18 0.003131155485425333 19 0.003159881682539327 20 0.0 21 0.010887228706203681 22 0.0 23 6.894287307358531E-4 24 0.004107846187301124 25 0.1723859088810773 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3481143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.782269747572705 #Duplication Level Percentage of deduplicated Percentage of total 1 58.79013227832096 21.624345039566826 2 15.705153100820915 11.553423555626456 3 8.019682281532377 8.849463509074596 4 4.774650140855977 7.024898777250023 5 3.1295229802206177 5.755547921985119 6 2.159982870856418 4.766944356358636 7 1.526629305651388 3.9307023647513284 8 1.104072999669972 3.248824871589813 9 0.8228739753127495 2.724045527538993 >10 3.7946891498250643 22.893837005129317 >50 0.12048103335500948 3.0247244192678653 >100 0.048437437224183026 3.0585749343857285 >500 0.0024354433437062143 0.6050194197923576 >1k 0.0011784403226589705 0.7848463193120686 >5k 7.85626881772647E-5 0.15480197837094078 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5357 0.15388623793966522 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.8726197113993882E-5 0.0 3 0.0 0.0 0.0 2.8726197113993882E-5 0.0 4 0.0 0.0 0.0 2.8726197113993882E-5 0.0 5 0.0 0.0 0.0 2.8726197113993882E-5 0.0 6 0.0 0.0 0.0 2.8726197113993882E-5 0.0 7 0.0 0.0 0.0 5.7452394227987763E-5 0.0 8 0.0 0.0 0.0 1.1490478845597553E-4 0.0 9 0.0 0.0 0.0 1.436309855699694E-4 0.0 10 0.0 0.0 0.0 1.723571826839633E-4 0.0 11 0.0 0.0 0.0 1.723571826839633E-4 0.0 12 0.0 0.0 0.0 1.723571826839633E-4 0.0 13 0.0 0.0 0.0 1.723571826839633E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2015 0.0 12.652751 1 TCGCGCA 80 2.8876639E-5 11.867378 18 ACCGCTC 120 1.2796954E-7 11.081631 8 CGACAGT 95 1.3718036E-5 10.992467 6 GTTCGCG 80 3.795658E-4 10.68064 16 CTATTAG 265 0.0 10.410638 1 CCGTCCA 235 0.0 10.106574 9 GTATCAA 4305 0.0 10.076668 1 CTACGGG 95 1.6372198E-4 10.004791 3 TAGGACA 460 0.0 9.917793 4 CGTGCGC 260 0.0 9.865572 10 TACGGGT 120 1.692141E-5 9.504551 4 TAGGACT 430 0.0 9.504551 4 CCTATAC 290 0.0 9.504551 3 CTAGACA 415 0.0 9.3900385 4 ATAATAC 315 0.0 9.353685 3 GTATAGG 245 1.8189894E-12 9.319024 1 GTCCTAG 290 0.0 9.185129 1 TACACCG 260 0.0 9.133476 5 GTATAGA 345 0.0 9.099554 1 >>END_MODULE