##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921177_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2520109 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.003750631421102 31.0 27.0 31.0 10.0 34.0 2 26.594808795968746 31.0 26.0 31.0 10.0 34.0 3 26.465386219405588 31.0 26.0 31.0 10.0 34.0 4 30.336302517073666 35.0 30.0 37.0 10.0 37.0 5 30.00336771147597 35.0 30.0 37.0 10.0 37.0 6 30.345924323114595 35.0 31.0 37.0 8.0 37.0 7 30.20131787950442 35.0 30.0 37.0 7.0 37.0 8 29.874491936658295 35.0 30.0 37.0 2.0 37.0 9 31.430338132199836 37.0 31.0 39.0 2.0 39.0 10 30.777238206760103 37.0 30.0 39.0 2.0 39.0 11 31.272160053394515 37.0 30.0 39.0 2.0 39.0 12 30.982340843193686 37.0 30.0 39.0 2.0 39.0 13 30.988765565298962 37.0 30.0 39.0 2.0 39.0 14 32.05847326445007 38.0 31.0 40.0 2.0 41.0 15 31.71368420969093 38.0 30.0 40.0 2.0 41.0 16 31.632581368504297 38.0 30.0 40.0 2.0 41.0 17 31.943554028813832 38.0 31.0 40.0 2.0 41.0 18 31.999982937245967 38.0 31.0 40.0 2.0 41.0 19 31.700162969141413 38.0 30.0 40.0 2.0 41.0 20 31.567846073324606 38.0 30.0 40.0 2.0 41.0 21 31.511247330968622 38.0 30.0 40.0 2.0 41.0 22 30.737181209225476 38.0 28.0 40.0 2.0 41.0 23 30.8265408361305 38.0 30.0 40.0 2.0 41.0 24 30.45792106611262 37.0 29.0 40.0 2.0 41.0 25 29.962164334955354 37.0 27.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 219108.0 3 4.0 4 1935.0 5 10665.0 6 12604.0 7 10604.0 8 9160.0 9 8176.0 10 7872.0 11 7460.0 12 7239.0 13 7264.0 14 6897.0 15 7216.0 16 7631.0 17 8322.0 18 9748.0 19 12041.0 20 15075.0 21 19197.0 22 22843.0 23 26944.0 24 30979.0 25 34967.0 26 38998.0 27 43301.0 28 48485.0 29 56560.0 30 67013.0 31 79611.0 32 99334.0 33 124551.0 34 157999.0 35 201726.0 36 264155.0 37 342715.0 38 491710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.49562806737873 17.812549121723432 12.158728066902398 25.533094743995438 2 16.213362957151602 19.779457131354583 38.484230319363924 25.52294959212989 3 18.802857761970113 23.103827626249437 30.240850819967502 27.852463791812948 4 13.620381342580504 15.685715805088748 34.88563135508132 35.80827149724942 5 14.102298012637938 36.72768429202583 33.93091635967368 15.23910133566255 6 33.90036109678187 34.25697392960597 16.991944764096665 14.850720209515494 7 29.668990065535322 31.501320428648246 20.29452205641633 18.535167449400102 8 26.113399844607738 34.51680387163234 20.51308810773017 18.856708176029752 9 26.96597332867713 15.8044949572112 19.15902592725606 38.07050578685561 10 16.113351391376742 27.9698748661718 32.68296864074996 23.233805101701492 11 35.26507280632549 22.705247484360093 22.177752837883098 19.851926871431317 12 23.213492732774444 24.780237114936256 29.269626469566944 22.736643682722356 13 28.450239195525228 21.279175207001852 25.24460247509331 25.025983122379614 14 22.74046866411479 21.021504416174054 25.79803668272007 30.439990236991086 15 24.713009039897777 28.01995285602038 22.990785494892734 24.276252609189108 16 24.189615568272345 27.16155770048295 24.935409388769788 23.713417342474923 17 23.136733245366244 27.397142816312336 25.752801370635186 23.713322567686227 18 23.069482745208237 26.8730065742368 26.51829784261522 23.539212837939743 19 24.293117126756517 26.30614333753094 26.72012299930666 22.680616536405882 20 24.760308196153975 25.81174539448044 26.266522839678153 23.161423569687432 21 25.201288180853354 25.496780738568663 25.78882026035097 23.513110820227013 22 24.342968890130525 24.962578949289913 26.94529939221547 23.749152768364095 23 24.683128594407382 25.331773896471542 25.866041092775248 24.11905641634583 24 24.157389207232114 25.51542433438619 26.288218549204167 24.03896790917753 25 23.902935882588615 25.260071478545477 26.79707946556532 24.03991317330059 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1286.0 1 1286.0 2 1426.0 3 1566.0 4 1566.0 5 1566.0 6 2141.0 7 2716.0 8 2716.0 9 2716.0 10 3353.0 11 3990.0 12 3990.0 13 3990.0 14 5918.0 15 7846.0 16 7846.0 17 7846.0 18 13931.0 19 20016.0 20 20016.0 21 20016.0 22 30793.0 23 41570.0 24 41570.0 25 41570.0 26 59893.0 27 78216.0 28 78216.0 29 78216.0 30 100729.5 31 123243.0 32 123243.0 33 123243.0 34 149505.0 35 175767.0 36 175767.0 37 175767.0 38 205982.5 39 236198.0 40 236198.0 41 236198.0 42 265474.5 43 294751.0 44 294751.0 45 294751.0 46 316021.5 47 337292.0 48 337292.0 49 337292.0 50 343510.0 51 349728.0 52 349728.0 53 349728.0 54 325049.0 55 300370.0 56 300370.0 57 300370.0 58 265683.5 59 230997.0 60 230997.0 61 230997.0 62 193255.0 63 155513.0 64 155513.0 65 155513.0 66 121735.0 67 87957.0 68 87957.0 69 87957.0 70 65440.0 71 42923.0 72 42923.0 73 42923.0 74 30309.5 75 17696.0 76 17696.0 77 17696.0 78 12306.0 79 6916.0 80 6916.0 81 6916.0 82 4676.5 83 2437.0 84 2437.0 85 2437.0 86 1650.5 87 864.0 88 864.0 89 864.0 90 538.5 91 213.0 92 213.0 93 213.0 94 123.0 95 33.0 96 33.0 97 33.0 98 19.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034006465593353304 2 0.056148365011195946 3 0.014880308748550163 4 0.010912226415603452 5 0.009364674305754236 6 3.5712740996520387E-4 7 0.003729997392969907 8 0.0013888288165313485 9 0.006904463259327275 10 0.0034522316296636377 11 0.010832864768944519 12 0.009285312659095301 13 0.008094887959211287 14 0.015634244391810038 15 0.006706059142679939 16 0.030951042196984337 17 0.03908561097952509 18 0.022895835061102515 19 0.016665945798376183 20 0.016467541681728846 21 0.02329264329439719 22 0.005436272796136993 23 0.01571360603846897 24 0.011586800412204393 25 0.4628371233149043 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2520109.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.863761371733496 #Duplication Level Percentage of deduplicated Percentage of total 1 71.308580810504 34.13096895670938 2 11.963573192694984 11.45243224896841 3 5.7232644536702075 8.218108922333865 4 3.249604816556658 6.221532379684147 5 2.0046780624559517 4.797571620427036 6 1.3513306720490856 3.8807861292757013 7 0.8954094264568819 3.000036418255307 8 0.6762325009765137 2.589362484684031 9 0.48902889417446194 2.106608606518424 >10 2.218015671445241 17.89437923754558 >50 0.09308248668406509 3.0138674604040263 >100 0.025738762665091293 1.9144625316658022 >500 9.448674314496222E-4 0.3221658081951484 >1k 5.153822353351697E-4 0.45771719533329575 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3126 0.12404225372791415 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.936164665893419E-5 2 0.0 0.0 0.0 7.936164665893419E-5 7.936164665893419E-5 3 0.0 0.0 0.0 1.190424699884013E-4 7.936164665893419E-5 4 0.0 0.0 0.0 1.190424699884013E-4 7.936164665893419E-5 5 0.0 0.0 0.0 1.190424699884013E-4 7.936164665893419E-5 6 0.0 0.0 0.0 1.190424699884013E-4 1.190424699884013E-4 7 0.0 0.0 0.0 1.190424699884013E-4 1.190424699884013E-4 8 0.0 0.0 0.0 1.5872329331786838E-4 1.190424699884013E-4 9 0.0 0.0 0.0 2.7776576330626967E-4 1.190424699884013E-4 10 0.0 0.0 0.0 2.7776576330626967E-4 1.5872329331786838E-4 11 0.0 0.0 0.0 2.7776576330626967E-4 1.5872329331786838E-4 12 0.0 0.0 0.0 3.1744658663573677E-4 2.7776576330626967E-4 13 0.0 0.0 0.0 3.5712740996520387E-4 2.7776576330626967E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1470 0.0 13.188786 1 TCGCACT 95 1.0464846E-6 11.9944105 4 TCGTCGC 70 0.0014933122 10.855964 13 GTACGGG 90 9.482188E-5 10.559649 1 GTATTAA 295 0.0 10.309081 1 GTATCAA 3110 0.0 10.267646 1 GCGTAGG 75 0.002640042 10.137263 1 TAGGGTG 250 0.0 9.87579 5 GTCTAGA 310 0.0 9.810255 1 AGACCGA 155 4.0943632E-8 9.802079 6 CTCGCAC 120 1.7093707E-5 9.4961405 3 TCTATAC 190 1.0604708E-9 9.4961405 3 TATACTA 175 2.6897396E-8 9.224639 5 TCTCGCA 135 6.845805E-6 9.148606 2 CTAGCAC 270 0.0 9.144431 3 GTCTAAG 355 0.0 9.10212 1 GTCTCGC 115 1.1063341E-4 9.09048 1 TCGATTC 95 0.0018260805 8.9990225 13 ACCCGGC 85 0.0074646934 8.937189 6 TCTAGCA 150 2.7009228E-6 8.867111 2 >>END_MODULE