##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921177_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2520109 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.495569040862915 31.0 30.0 33.0 26.0 34.0 2 29.75630895330321 31.0 30.0 34.0 26.0 34.0 3 29.88844530137387 31.0 30.0 34.0 26.0 34.0 4 33.58145699253485 35.0 35.0 37.0 29.0 37.0 5 33.11570967763696 35.0 35.0 37.0 27.0 37.0 6 33.071432227733006 36.0 35.0 37.0 26.0 37.0 7 32.91391364421142 36.0 33.0 37.0 26.0 37.0 8 32.84969142207738 36.0 33.0 37.0 26.0 37.0 9 34.22035356407203 38.0 35.0 39.0 26.0 39.0 10 34.085636772060255 38.0 34.0 39.0 25.0 39.0 11 34.11678304390802 38.0 34.0 39.0 25.0 39.0 12 33.98265075042389 38.0 34.0 39.0 25.0 39.0 13 33.96216909665415 38.0 34.0 39.0 25.0 39.0 14 34.88233207373173 39.0 34.0 41.0 25.0 41.0 15 34.87222100313915 39.0 34.0 41.0 25.0 41.0 16 34.852563520069964 39.0 34.0 41.0 24.0 41.0 17 34.824854401139 39.0 34.0 41.0 24.0 41.0 18 34.77975873265799 39.0 34.0 41.0 24.0 41.0 19 34.821658507628044 39.0 34.0 41.0 23.0 41.0 20 34.751352421661124 39.0 34.0 41.0 23.0 41.0 21 34.67917578168246 39.0 34.0 41.0 22.0 41.0 22 34.586631371897006 39.0 34.0 41.0 21.0 41.0 23 34.45544418912039 39.0 34.0 41.0 18.0 41.0 24 34.37383700466924 39.0 34.0 41.0 18.0 41.0 25 34.236453264521494 39.0 34.0 41.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 81726.0 3 7.0 4 1308.0 5 11470.0 6 12704.0 7 9812.0 8 7822.0 9 6620.0 10 5826.0 11 5388.0 12 4990.0 13 4802.0 14 4557.0 15 4626.0 16 4848.0 17 5000.0 18 5557.0 19 6529.0 20 8270.0 21 10648.0 22 13470.0 23 16418.0 24 19400.0 25 22389.0 26 25650.0 27 28585.0 28 33298.0 29 40163.0 30 50909.0 31 64939.0 32 82618.0 33 106530.0 34 138379.0 35 183209.0 36 248009.0 37 371625.0 38 872008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.99964251597258 18.905860553424993 9.214349408860441 31.880147521741982 2 15.043396932434272 21.00952776248964 34.90091103202282 29.04616427305327 3 17.85025270689335 23.513292716039384 28.225684801542123 30.410769775525143 4 13.394350953617026 16.46312461141069 33.02467199687461 37.11785243809767 5 14.769250316652968 37.24541696942264 32.465168173498036 15.520164540426359 6 33.92741282956154 35.12631266079016 16.2029256616231 14.743348848025201 7 29.79730882627208 31.893067311088096 19.432440904888317 18.877182957751508 8 27.348268548151882 34.842013575423756 18.72694191853555 19.082775957888806 9 26.98569784084736 15.49996448566312 18.988980238553175 38.525357434936346 10 16.799392407233178 28.443610970795312 31.00592077564899 23.751075846322518 11 35.54618070533071 22.59540845744472 21.777465782480107 20.080945054744458 12 23.394146840473965 24.87765410146942 28.681656229948782 23.04654282810783 13 28.66016788475839 21.034760255898465 25.003591181486804 25.301480677856336 14 22.885873559161478 20.845305168140342 25.56667787589047 30.702143396807713 15 24.886337792768245 28.089756529697834 22.44968996164756 24.574215715886353 16 24.781846450059405 27.041000565869872 24.10887399831906 24.068278985751668 17 23.25190031538331 27.297242816577704 25.620925769847958 23.82993109819103 18 23.226250132937984 26.534977372764455 26.544620337051366 23.694152157246194 19 24.42719586986585 26.049725894488724 26.423850651682628 23.099227583962794 20 24.788600162056674 25.581622360329288 26.18560489122283 23.444172586391208 21 25.073378723107037 25.214223010996093 25.951542262810918 23.760856003085955 22 25.00181540343026 25.089311896626366 25.60909265144532 24.299780048498057 23 24.547297594912447 25.272526193109375 25.71553626480288 24.464639947175296 24 24.265260283975014 25.469773089835474 26.00149209901823 24.263474527171283 25 24.229606482235937 25.29907524955066 26.082803838910745 24.388514429302656 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 959.0 1 959.0 2 1067.5 3 1176.0 4 1176.0 5 1176.0 6 1592.5 7 2009.0 8 2009.0 9 2009.0 10 2625.5 11 3242.0 12 3242.0 13 3242.0 14 4384.0 15 5526.0 16 5526.0 17 5526.0 18 11147.0 19 16768.0 20 16768.0 21 16768.0 22 26893.0 23 37018.0 24 37018.0 25 37018.0 26 54886.0 27 72754.0 28 72754.0 29 72754.0 30 93318.5 31 113883.0 32 113883.0 33 113883.0 34 138416.0 35 162949.0 36 162949.0 37 162949.0 38 192713.5 39 222478.0 40 222478.0 41 222478.0 42 252635.0 43 282792.0 44 282792.0 45 282792.0 46 308056.5 47 333321.0 48 333321.0 49 333321.0 50 345914.5 51 358508.0 52 358508.0 53 358508.0 54 336219.5 55 313931.0 56 313931.0 57 313931.0 58 280453.0 59 246975.0 60 246975.0 61 246975.0 62 208083.5 63 169192.0 64 169192.0 65 169192.0 66 133349.5 67 97507.0 68 97507.0 69 97507.0 70 72621.0 71 47735.0 72 47735.0 73 47735.0 74 33784.5 75 19834.0 76 19834.0 77 19834.0 78 13703.0 79 7572.0 80 7572.0 81 7572.0 82 5135.5 83 2699.0 84 2699.0 85 2699.0 86 1827.5 87 956.0 88 956.0 89 956.0 90 616.5 91 277.0 92 277.0 93 277.0 94 158.5 95 40.0 96 40.0 97 40.0 98 24.0 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09975758985028028 2 0.0 3 0.03908561097952509 4 0.054878578664653004 5 0.06265602003722855 6 0.005237868679489657 7 7.539356432598749E-4 8 0.004523613859559249 9 0.0 10 0.0 11 0.005079145386171788 12 0.0 13 0.0018649986964849536 14 0.05356911149478059 15 0.023094239177749852 16 0.003769678216299374 17 3.9680823329467096E-5 18 0.005436272796136993 19 0.003729997392969907 20 1.190424699884013E-4 21 0.012102651115487466 22 3.1744658663573677E-4 23 0.0030157425730394996 24 0.006706059142679939 25 0.16614360728047875 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2520109.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.09372095883444 #Duplication Level Percentage of deduplicated Percentage of total 1 60.44621690690391 21.212826691480668 2 14.608633452002511 10.25342611908941 3 7.443651332892627 7.836762683741698 4 4.634170544838623 6.505211519048657 5 2.9141551392136917 5.113427364315932 6 2.059183024681619 4.335863668280726 7 1.5245214035931396 3.7450790113427788 8 1.0914116464993981 3.0641356618777547 9 0.8581929357910795 2.7105465075745556 >10 4.149986157989403 25.154208631851727 >50 0.19753196597281364 4.729556387909653 >100 0.06972066771422751 3.8892695614113966 >500 0.0013694722993082742 0.364614279985994 >1k 0.0011412269160900657 0.8526222986183039 >5k 1.1412269160900659E-4 0.23244961347083634 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5804 0.23030749860422703 No Hit GGTATCAACGCAGAGTACTTTTTTT 3882 0.15404095616499128 No Hit TATCAACGCAGAGTACTTTTTTTTT 3783 0.15011255465537401 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2589 0.10273365159999032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.190424699884013E-4 2 0.0 0.0 0.0 0.0 1.190424699884013E-4 3 0.0 0.0 0.0 0.0 1.190424699884013E-4 4 0.0 0.0 0.0 0.0 1.190424699884013E-4 5 0.0 0.0 0.0 0.0 1.190424699884013E-4 6 0.0 0.0 0.0 0.0 1.5872329331786838E-4 7 0.0 0.0 0.0 0.0 1.5872329331786838E-4 8 0.0 0.0 0.0 1.5872329331786838E-4 1.5872329331786838E-4 9 0.0 0.0 0.0 1.984041166473355E-4 1.5872329331786838E-4 10 0.0 0.0 0.0 1.984041166473355E-4 1.5872329331786838E-4 11 0.0 0.0 0.0 1.984041166473355E-4 1.5872329331786838E-4 12 0.0 0.0 0.0 2.380849399768026E-4 2.7776576330626967E-4 13 0.0 0.0 0.0 2.380849399768026E-4 3.5712740996520387E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1455 0.0 15.037406 1 ACGGTCC 40 0.005287449 14.247097 8 TCGATCG 50 0.0014902097 13.311561 19 CCCTATA 100 1.4371835E-7 12.354351 2 TGTCGTA 55 0.0030671933 12.092047 14 GTATCAA 3340 0.0 10.765976 1 CCCCTAT 165 9.094947E-10 10.377593 1 GTAAGAC 110 6.0235016E-6 10.367288 3 GTACGGG 85 6.514861E-4 10.07237 1 TAGACAG 200 2.5465852E-11 9.974948 5 GTATTAG 185 6.330083E-10 9.7698965 1 AATCGGT 80 0.004484834 9.508257 19 TATTAAG 200 2.6375346E-10 9.503346 2 CTAGGTT 100 2.7466283E-4 9.503346 4 GCACCGT 150 2.6768066E-7 9.493353 6 GCTAGTC 135 6.841994E-6 9.149008 13 GACTGCG 135 6.911243E-6 9.141747 7 GCTCCGT 115 1.1195177E-4 9.080598 6 TCGTTAG 95 0.0018227162 9.000846 14 CGTTAGG 95 0.0018299742 8.996916 15 >>END_MODULE