##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921176_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2502956 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.54338989578722 31.0 30.0 33.0 26.0 34.0 2 29.8001447088962 31.0 30.0 34.0 26.0 34.0 3 29.936683265706627 31.0 30.0 34.0 26.0 34.0 4 33.627588739074916 35.0 35.0 37.0 30.0 37.0 5 33.1784625858385 35.0 35.0 37.0 27.0 37.0 6 33.143550665692885 36.0 35.0 37.0 27.0 37.0 7 32.98863224123796 36.0 35.0 37.0 26.0 37.0 8 32.92845099953814 36.0 35.0 37.0 26.0 37.0 9 34.31083966318225 38.0 35.0 39.0 26.0 39.0 10 34.17652407793025 38.0 34.0 39.0 26.0 39.0 11 34.21134210909021 38.0 35.0 39.0 26.0 39.0 12 34.07409359173713 38.0 34.0 39.0 25.0 39.0 13 34.0622499956052 38.0 34.0 39.0 25.0 39.0 14 34.99199027070392 39.0 34.0 41.0 25.0 41.0 15 34.98536810075766 39.0 34.0 41.0 25.0 41.0 16 34.96498500173395 39.0 34.0 41.0 25.0 41.0 17 34.94359189694106 39.0 34.0 41.0 25.0 41.0 18 34.89582477678393 39.0 34.0 41.0 25.0 41.0 19 34.949878463704515 39.0 34.0 41.0 25.0 41.0 20 34.87341567330788 39.0 34.0 41.0 24.0 41.0 21 34.80030531899082 39.0 34.0 41.0 23.0 41.0 22 34.716913521452234 39.0 34.0 41.0 23.0 41.0 23 34.58831717377373 39.0 34.0 41.0 21.0 41.0 24 34.50922908752691 39.0 34.0 41.0 19.0 41.0 25 34.37206846624551 39.0 34.0 41.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 79986.0 3 3.0 4 1266.0 5 10839.0 6 12231.0 7 9197.0 8 7233.0 9 6249.0 10 5470.0 11 5039.0 12 4820.0 13 4520.0 14 4424.0 15 4468.0 16 4522.0 17 4742.0 18 5165.0 19 6464.0 20 7769.0 21 10181.0 22 13131.0 23 15642.0 24 19070.0 25 22074.0 26 24957.0 27 28155.0 28 32478.0 29 39167.0 30 50203.0 31 63823.0 32 81670.0 33 105306.0 34 137280.0 35 181950.0 36 245950.0 37 368143.0 38 879369.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.13383437236542 18.927181367491013 9.083412120601311 31.85557213954225 2 14.681600475597653 20.962094419558312 35.15471306726926 29.20159203757477 3 17.732875921149557 23.51100223390134 28.366550075322728 30.38957176962638 4 12.991033898013738 16.39510652068152 33.637333587044424 36.97652599426032 5 14.180152583862954 37.609327581154375 33.32201927547652 14.888500559506149 6 34.197202749146385 35.60206098080376 16.069809012475996 14.130927257573855 7 29.650516111401437 32.098229767458214 19.52249906909772 18.72875505204263 8 27.53790993349331 35.2662465150509 18.568456026714546 18.62738752474124 9 26.678894874700156 15.631517293951633 18.89250150621905 38.797086325129165 10 16.05749361954425 28.83418645793214 31.864004001668427 23.24431592085518 11 35.697910515503125 22.57836266048294 22.057969231064273 19.66575759294966 12 23.090697559205996 24.95445385376331 29.241824466750515 22.71302412028018 13 28.57455061793405 21.126061103415708 25.320453531191557 24.978934747458688 14 22.356963570667055 20.839564387829626 25.974912685287677 30.828559356215646 15 24.44091895412822 28.420642500629395 22.59989370247082 24.538544842771568 16 24.355220839409498 27.539823008849556 24.344593379811823 23.760362771929124 17 22.96384754666083 27.51950094208608 25.92598511519979 23.590666396053305 18 23.043269807023854 27.28878500938911 26.61908186503656 23.04886331855048 19 24.157077116206892 26.492889442558187 26.57691204355911 22.773121397675812 20 24.380492505661305 26.275132283587887 26.31025075950196 23.034124451248843 21 24.45203240858017 25.810993633515185 26.242471413947772 23.494502543956873 22 24.414452351539538 25.791344314482558 25.89122621412442 23.902977119853485 23 24.061853635383336 25.67315809681491 26.115797375966913 24.149190891834845 24 23.688009285247684 26.14448468673276 26.272656264046233 23.89484976397332 25 23.767627899828543 25.841712705855606 26.298329141645947 24.0923302526699 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 729.0 1 729.0 2 814.0 3 899.0 4 899.0 5 899.0 6 1268.0 7 1637.0 8 1637.0 9 1637.0 10 2291.0 11 2945.0 12 2945.0 13 2945.0 14 4200.0 15 5455.0 16 5455.0 17 5455.0 18 10685.0 19 15915.0 20 15915.0 21 15915.0 22 26795.5 23 37676.0 24 37676.0 25 37676.0 26 57307.5 27 76939.0 28 76939.0 29 76939.0 30 99504.5 31 122070.0 32 122070.0 33 122070.0 34 147858.0 35 173646.0 36 173646.0 37 173646.0 38 204041.5 39 234437.0 40 234437.0 41 234437.0 42 261953.0 43 289469.0 44 289469.0 45 289469.0 46 314235.5 47 339002.0 48 339002.0 49 339002.0 50 346234.5 51 353467.0 52 353467.0 53 353467.0 54 330461.0 55 307455.0 56 307455.0 57 307455.0 58 270128.0 59 232801.0 60 232801.0 61 232801.0 62 194512.0 63 156223.0 64 156223.0 65 156223.0 66 121931.0 67 87639.0 68 87639.0 69 87639.0 70 63952.0 71 40265.0 72 40265.0 73 40265.0 74 28128.0 75 15991.0 76 15991.0 77 15991.0 78 10774.5 79 5558.0 80 5558.0 81 5558.0 82 3784.5 83 2011.0 84 2011.0 85 2011.0 86 1271.5 87 532.0 88 532.0 89 532.0 90 342.5 91 153.0 92 153.0 93 153.0 94 96.0 95 39.0 96 39.0 97 39.0 98 21.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10195944315441421 2 0.0 3 0.042150161648866376 4 0.05685277727614868 5 0.06564238444463266 6 0.0027966931899721767 7 3.1962207885396306E-4 8 0.001997637992837269 9 0.0 10 0.0 11 0.001678015913983306 12 0.0 13 7.591024372781624E-4 14 0.05485513928331141 15 0.02181420688178298 16 2.3971655914047232E-4 17 0.0 18 0.0022373545519777417 19 0.0023172600716912326 20 0.0 21 0.0064723470967927525 22 0.0 23 5.992913978511808E-4 24 0.0024371183512614685 25 0.1741940329754099 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2502956.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.433199451053866 #Duplication Level Percentage of deduplicated Percentage of total 1 61.0564108943429 22.855368067734364 2 14.711034995848655 11.013622142620722 3 7.4516882373672555 8.368215961093215 4 4.460959585680283 6.679519596554427 5 2.8906733846626143 5.410357667796429 6 2.065147574156507 4.638304862355634 7 1.4466207928269526 3.7906151267553096 8 1.054560521442628 3.158045946589541 9 0.8159572554356174 2.748950161763038 >10 3.8741618599301835 24.247467701661705 >50 0.12677911881258036 3.1848587212823145 >100 0.04331684232500466 2.65328434012034 >500 0.00161336230131762 0.4137344549708767 >1k 0.0010755748675440318 0.8376552487020915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4690 0.18737844372813586 No Hit TATCAACGCAGAGTACTTTTTTTTT 2935 0.1172613501795477 No Hit GGTATCAACGCAGAGTACTTTTTTT 2827 0.11294645211501919 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.995275985674538E-5 0.0 10 0.0 0.0 0.0 3.995275985674538E-5 0.0 11 0.0 0.0 0.0 3.995275985674538E-5 0.0 12 0.0 0.0 0.0 3.995275985674538E-5 3.995275985674538E-5 13 0.0 0.0 0.0 3.995275985674538E-5 3.995275985674538E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTA 50 0.001500469 13.29944 9 GGTATCA 1590 0.0 12.3253975 1 ACGACCG 85 5.3257507E-5 11.176447 5 CTCCTAG 310 0.0 11.047694 1 TACGAGA 165 8.0035534E-11 10.945497 4 GACCGTC 150 2.1591404E-9 10.759332 7 CCGCGTC 115 8.827574E-7 10.738679 9 CGTGGAC 135 5.6421413E-8 10.561868 3 CTACGAC 90 9.4619565E-5 10.561868 3 CTAGATC 135 5.6454155E-8 10.561445 4 ACCGCTC 100 2.4053332E-5 10.44789 8 ACCGAGC 130 3.8546023E-7 10.228703 8 CTTATAC 365 0.0 10.164887 1 CCGAGCG 75 0.0026494607 10.132907 9 AGACCGT 225 0.0 10.126632 6 ATTATAC 220 1.8189894E-12 9.937757 3 AAGACCG 270 0.0 9.851831 5 TATACTG 245 0.0 9.693857 5 GTTCTAA 220 1.6370905E-11 9.513292 1 TATACAC 420 0.0 9.505681 3 >>END_MODULE