##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921173_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1434516 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.700954886526187 30.0 26.0 31.0 2.0 33.0 2 25.506120531245383 30.0 25.0 31.0 2.0 34.0 3 25.348682761293706 30.0 25.0 31.0 2.0 34.0 4 29.131794974751067 35.0 28.0 37.0 2.0 37.0 5 28.907292076212464 35.0 28.0 37.0 2.0 37.0 6 29.103501111176175 35.0 29.0 37.0 2.0 37.0 7 29.053377585192496 35.0 29.0 37.0 2.0 37.0 8 28.56924844337742 35.0 27.0 37.0 2.0 37.0 9 30.143840849457238 37.0 29.0 39.0 2.0 39.0 10 29.511076209676293 35.0 27.0 39.0 2.0 39.0 11 29.917657244673464 35.0 28.0 39.0 2.0 39.0 12 29.66481865660613 35.0 27.0 39.0 2.0 39.0 13 29.64619704485694 35.0 27.0 39.0 2.0 39.0 14 30.64495760242479 37.0 28.0 40.0 2.0 41.0 15 30.296580170594122 37.0 27.0 40.0 2.0 41.0 16 30.214162128550676 37.0 27.0 40.0 2.0 41.0 17 30.4869537878978 37.0 28.0 40.0 2.0 41.0 18 30.542182171547754 37.0 29.0 40.0 2.0 41.0 19 30.282887747505082 37.0 27.0 40.0 2.0 41.0 20 30.13253668833251 37.0 27.0 40.0 2.0 41.0 21 30.084812577900838 37.0 27.0 40.0 2.0 41.0 22 29.380159579955887 37.0 25.0 40.0 2.0 41.0 23 29.435134219485874 37.0 26.0 40.0 2.0 41.0 24 29.063355166481237 37.0 25.0 40.0 2.0 41.0 25 28.5943997836204 37.0 22.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 166987.0 3 9.0 4 1384.0 5 7230.0 6 8302.0 7 7173.0 8 6089.0 9 5509.0 10 5276.0 11 4876.0 12 4715.0 13 4479.0 14 4534.0 15 4556.0 16 4774.0 17 5351.0 18 6103.0 19 7342.0 20 9301.0 21 11623.0 22 14089.0 23 16493.0 24 18497.0 25 20711.0 26 23149.0 27 25426.0 28 28113.0 29 32668.0 30 38167.0 31 45462.0 32 55194.0 33 69165.0 34 87036.0 35 109968.0 36 142843.0 37 185021.0 38 246901.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.85390770732728 18.57547811230627 12.05111486898764 25.519499311378812 2 16.09068020616112 20.170243334286493 38.705146356262595 25.03393010328979 3 18.13745107417204 24.437396553334903 30.39125324022494 27.033899132268107 4 12.875127755724083 16.294031280457453 36.157554005987265 34.6732869578312 5 13.303322815476449 37.25705632932837 35.432930884713045 14.006689970482144 6 32.50749908156728 35.70726987422177 17.54955876888887 14.235672275322079 7 28.11131900796948 32.26601843744598 21.9753330842289 17.647329470355643 8 26.08428326046221 34.42874710002677 21.456664919246897 18.03030472026412 9 26.64637950927388 15.19382601148211 19.71890783983603 38.44088663940798 10 15.22513397055471 28.739585780542743 34.14734634778178 21.887933901120775 11 34.853591198739494 22.612421043825034 23.05408759429424 19.479900163141238 12 22.430069430355964 25.415804800238707 30.443318295550643 21.710807473854686 13 28.508535571095834 21.961936937093952 25.60043892641499 23.929088565395226 14 21.965075305761893 21.147316504518624 26.887454803295856 30.000153386423627 15 24.207448595876517 28.792165184764833 23.354489416613568 23.645896802745085 16 23.602577593126046 27.62977048933406 25.56596662182865 23.20168529571124 17 22.62119956817554 27.931343258600922 26.39896618769858 23.048490985524957 18 22.56412008501001 27.531404617538612 27.03851109759975 22.865964199851625 19 23.77766064404033 27.11855189233736 27.083969550806064 22.019817912816244 20 24.17684089576444 26.429150621818483 26.712153506230734 22.68185497618634 21 24.57930018868214 26.10040176884276 26.424006281037375 22.89629176143772 22 23.637271182163328 25.68071955706695 27.48930243063834 23.19270683013138 23 23.727640099730593 25.977225950034306 26.594197442032986 23.700936508202116 24 23.562134154333535 26.20563489473963 26.817689988761444 23.41454096216539 25 23.408776978014124 26.032680416126148 27.1550190383597 23.40352356750002 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 486.0 1 486.0 2 533.5 3 581.0 4 581.0 5 581.0 6 989.0 7 1397.0 8 1397.0 9 1397.0 10 2040.5 11 2684.0 12 2684.0 13 2684.0 14 4583.5 15 6483.0 16 6483.0 17 6483.0 18 10999.5 19 15516.0 20 15516.0 21 15516.0 22 22969.0 23 30422.0 24 30422.0 25 30422.0 26 42315.5 27 54209.0 28 54209.0 29 54209.0 30 68270.5 31 82332.0 32 82332.0 33 82332.0 34 97938.0 35 113544.0 36 113544.0 37 113544.0 38 130091.5 39 146639.0 40 146639.0 41 146639.0 42 160068.5 43 173498.0 44 173498.0 45 173498.0 46 181917.0 47 190336.0 48 190336.0 49 190336.0 50 188702.0 51 187068.0 52 187068.0 53 187068.0 54 172532.0 55 157996.0 56 157996.0 57 157996.0 58 138494.0 59 118992.0 60 118992.0 61 118992.0 62 97979.0 63 76966.0 64 76966.0 65 76966.0 66 59692.5 67 42419.0 68 42419.0 69 42419.0 70 31361.0 71 20303.0 72 20303.0 73 20303.0 74 14231.5 75 8160.0 76 8160.0 77 8160.0 78 5605.0 79 3050.0 80 3050.0 81 3050.0 82 2044.5 83 1039.0 84 1039.0 85 1039.0 86 672.0 87 305.0 88 305.0 89 305.0 90 189.5 91 74.0 92 74.0 93 74.0 94 41.5 95 9.0 96 9.0 97 9.0 98 8.5 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03422757222645129 2 0.04782100722473642 3 0.01408140445976204 4 0.009619969383401789 5 0.009062289998856757 6 4.879694614769023E-4 7 0.003067236614997672 8 0.001394198461362578 9 0.007737801460562309 10 0.004112885461019605 11 0.012268946459990687 12 0.008992580075788629 13 0.007458961768289793 14 0.01603328230566965 15 0.006831572460676632 16 0.032415114226679934 17 0.041825953840877346 18 0.023143694458618795 19 0.017985160151577258 20 0.017776030382372868 21 0.024956152458390148 22 0.005437373999314055 23 0.017566900613168485 24 0.011711267075445656 25 0.4790465913241818 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1434516.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.957851516686 #Duplication Level Percentage of deduplicated Percentage of total 1 83.0903436024714 58.959122638145864 2 10.11793427931235 14.35893756494066 3 3.200204471887064 6.812389012175904 4 1.3602095378385188 3.8607018567010285 5 0.6755895169741765 2.3969190315841615 6 0.39464669936970165 1.6801969137255304 7 0.25573422824781983 1.270244597702016 8 0.1799489720128757 1.0215033949335934 9 0.11957454527027915 0.7636277545617344 >10 0.5789095238372296 6.816551383684071 >50 0.02041204755215145 0.9852149504598284 >100 0.0059931838946662265 0.7395105820982317 >500 2.996347990349297E-4 0.15931906889978342 >1k 1.9975653268995315E-4 0.1757612503876614 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1463 0.10198561744867259 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 6.97099230681289E-5 8 0.0 0.0 0.0 0.0 6.97099230681289E-5 9 0.0 0.0 0.0 0.0 6.97099230681289E-5 10 0.0 0.0 0.0 0.0 6.97099230681289E-5 11 6.97099230681289E-5 0.0 0.0 0.0 6.97099230681289E-5 12 6.97099230681289E-5 0.0 0.0 0.0 6.97099230681289E-5 13 6.97099230681289E-5 0.0 0.0 0.0 6.97099230681289E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 810 0.0 12.669761 1 TAGGACG 60 4.106151E-4 12.661367 4 ATATGAC 105 2.7339047E-7 11.756985 3 GTTAGGC 85 5.344695E-5 11.171795 3 TTAGGCT 95 1.3662026E-5 10.995398 4 CGCTCGC 70 0.0014930168 10.855628 15 ACTAGAC 80 3.784898E-4 10.683029 3 TATGACT 170 1.4006218E-10 10.613205 4 CTGCCCG 100 2.4091154E-5 10.445628 9 GTATAAG 130 3.826135E-7 10.233268 1 GCCTCGA 75 0.0026504232 10.131919 16 CTAGGGG 85 6.617691E-4 10.054615 3 AGGCGTG 95 1.6511574E-4 9.995467 7 GTATTAG 125 2.5604768E-6 9.882413 1 GTTCTAG 205 4.1836756E-11 9.734085 1 GTATCAA 1475 0.0 9.663377 1 GTATACA 100 2.747754E-4 9.502321 1 GCGTTCA 80 0.0045202887 9.498674 13 AAAACGA 80 0.0045202887 9.498674 13 ACCCGAC 80 0.0045215893 9.498343 11 >>END_MODULE