##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921171_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1345879 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.355781611868526 31.0 30.0 33.0 25.0 34.0 2 29.598853240150117 31.0 30.0 34.0 26.0 34.0 3 29.742415922976733 31.0 30.0 34.0 26.0 34.0 4 33.42773087328059 35.0 35.0 37.0 28.0 37.0 5 32.960599727018554 35.0 33.0 37.0 26.0 37.0 6 32.92416703136018 36.0 35.0 37.0 26.0 37.0 7 32.76194368141564 36.0 33.0 37.0 25.0 37.0 8 32.70102884434633 36.0 33.0 37.0 25.0 37.0 9 34.05846365089284 38.0 34.0 39.0 25.0 39.0 10 33.91647391778904 38.0 34.0 39.0 25.0 39.0 11 33.96187398718607 38.0 34.0 39.0 25.0 39.0 12 33.82158648734396 38.0 34.0 39.0 23.0 39.0 13 33.79783843867094 38.0 34.0 39.0 23.0 39.0 14 34.7386897336239 39.0 34.0 41.0 22.0 41.0 15 34.72430954045646 39.0 34.0 41.0 22.0 41.0 16 34.70269689920119 39.0 34.0 41.0 22.0 41.0 17 34.68745704480121 39.0 34.0 41.0 22.0 41.0 18 34.62662913976665 39.0 34.0 41.0 22.0 41.0 19 34.654794376017456 39.0 34.0 41.0 21.0 41.0 20 34.58784184908153 39.0 34.0 41.0 19.0 41.0 21 34.516012955102205 39.0 34.0 41.0 18.0 41.0 22 34.43733872064279 39.0 34.0 41.0 18.0 41.0 23 34.305582448347884 39.0 34.0 41.0 18.0 41.0 24 34.2173768964372 39.0 34.0 41.0 16.0 41.0 25 34.07990985816704 39.0 34.0 41.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 48961.0 3 3.0 4 799.0 5 6576.0 6 7245.0 7 5452.0 8 4266.0 9 3589.0 10 3153.0 11 2982.0 12 2745.0 13 2617.0 14 2607.0 15 2520.0 16 2597.0 17 2845.0 18 3002.0 19 3647.0 20 4414.0 21 5894.0 22 7110.0 23 8722.0 24 10253.0 25 11899.0 26 13443.0 27 15283.0 28 17465.0 29 21095.0 30 26903.0 31 34015.0 32 42848.0 33 55411.0 34 73134.0 35 96249.0 36 129667.0 37 194953.0 38 471515.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.4647983595352 18.794240522663866 9.408425604519758 31.332535513281172 2 15.207162010849414 21.005082923502037 35.14528423431824 28.642470831330307 3 18.198921014644647 24.242309367608737 27.851439563886547 29.70733005386007 4 13.781116533905266 16.31229347022068 32.5009571458839 37.40563284999015 5 14.784459747826306 37.5819549632476 32.33297098916982 15.300614299756274 6 34.2389127696806 34.384476205691016 16.39546591073744 14.981145113890943 7 29.56665628898596 32.0911076155582 19.447600266599892 18.894635828855947 8 27.73914355114715 34.63594124889565 18.692047112043056 18.932868087914144 9 27.285878597667534 15.663450907664325 18.813156080221596 38.237514414446544 10 17.12135228011517 28.727036314665185 30.780421658772173 23.37118974644748 11 35.6827434420681 22.715117181956185 21.603744353784666 19.998395022191048 12 23.672463139249082 24.76305395147844 28.46725849929711 23.09722440997536 13 28.562045075596586 21.205310039618734 25.280050645401936 24.952594239382744 14 22.890841641204066 20.768710365694997 25.4823025626157 30.85814543048524 15 24.673831534684407 28.105670036052256 22.679326697618144 24.541171731645196 16 24.704289630093616 27.180313665872358 24.0622308810865 24.053165822947527 17 23.32188584811451 27.23389426506253 25.614850325740647 23.829369561082313 18 23.48888514063267 26.964336002603634 26.403038762500824 23.143740094262867 19 24.58407947630052 26.152280039530098 26.224504201930436 23.03913628223895 20 24.907697668906394 25.803191888540244 25.724802708179002 23.564307734374363 21 24.84493465594331 25.433540186204738 25.8350344015819 23.88649075627005 22 25.013095920091484 25.143274938532766 25.630628923667693 24.21300021770806 23 24.70454925417495 25.15691118830457 25.75082198651385 24.387717571006633 24 24.22020243751291 25.706904007882315 25.86443136339926 24.208462191205516 25 24.178717208978288 25.395382833596823 26.009819070671703 24.416080886753186 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 554.0 1 554.0 2 589.0 3 624.0 4 624.0 5 624.0 6 807.0 7 990.0 8 990.0 9 990.0 10 1315.5 11 1641.0 12 1641.0 13 1641.0 14 2040.5 15 2440.0 16 2440.0 17 2440.0 18 4968.5 19 7497.0 20 7497.0 21 7497.0 22 12671.0 23 17845.0 24 17845.0 25 17845.0 26 27216.5 27 36588.0 28 36588.0 29 36588.0 30 48137.5 31 59687.0 32 59687.0 33 59687.0 34 73130.0 35 86573.0 36 86573.0 37 86573.0 38 103181.0 39 119789.0 40 119789.0 41 119789.0 42 136020.0 43 152251.0 44 152251.0 45 152251.0 46 167738.5 47 183226.0 48 183226.0 49 183226.0 50 189416.5 51 195607.0 52 195607.0 53 195607.0 54 184263.5 55 172920.0 56 172920.0 57 172920.0 58 152563.5 59 132207.0 60 132207.0 61 132207.0 62 110833.0 63 89459.0 64 89459.0 65 89459.0 66 69419.0 67 49379.0 68 49379.0 69 49379.0 70 36389.5 71 23400.0 72 23400.0 73 23400.0 74 16039.5 75 8679.0 76 8679.0 77 8679.0 78 5893.5 79 3108.0 80 3108.0 81 3108.0 82 2056.5 83 1005.0 84 1005.0 85 1005.0 86 644.0 87 283.0 88 283.0 89 283.0 90 179.5 91 76.0 92 76.0 93 76.0 94 58.5 95 41.0 96 41.0 97 41.0 98 25.5 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10268382224553618 2 0.0 3 0.040196778462254036 4 0.05453684915211546 5 0.06932272514839743 6 0.005498265445853602 7 0.003120637144943936 8 0.004903858370626186 9 5.201061908239894E-4 10 2.972035376137082E-4 11 0.004903858370626186 12 2.2290265321028114E-4 13 0.00378934510457478 14 0.057137380106235404 15 0.024667893621937782 16 0.003863645988978207 17 0.0017089203412788223 18 0.00505246013943304 19 0.005126761023836466 20 0.0022290265321028117 21 0.01159093796693462 22 0.002972035376137082 23 0.004012247757785061 24 0.0060183716366775915 25 0.17616739692052555 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1345879.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.75778239732569 #Duplication Level Percentage of deduplicated Percentage of total 1 64.7787731319597 27.697966855420614 2 14.79529853613763 12.652283106232884 3 7.080930237742169 9.082946228280699 4 4.043789119120735 6.91613820864151 5 2.510557094211283 5.367292696517417 6 1.5978841622016122 4.099318998212977 7 1.1035156052033714 3.3028716083537244 8 0.7936328687155797 2.714718520312489 9 0.5616905183986196 2.161497686429632 >10 2.588867977861736 18.51303233460256 >50 0.10407039919705541 3.014504993793533 >100 0.037136569708011186 2.8249194190569855 >500 0.0024524051634171955 0.6445108510342021 >1k 0.0014013743790955405 1.0079984931107835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2760 0.20507044095345867 No Hit TATCAACGCAGAGTACTTTTTTTTT 1890 0.14042867152247715 No Hit CTTATACACATCTCCGAGCCCACGA 1739 0.12920923797755965 No Hit GGTATCAACGCAGAGTACATGGGGG 1708 0.1269059105610534 No Hit GGTATCAACGCAGAGTACTTTTTTT 1645 0.1222249548436375 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 240 0.0 14.66736 1 TTGCGCG 40 0.005301478 14.24072 18 GGTATCA 985 0.0 13.81215 1 CGTGTCA 50 0.0014991653 13.300235 10 GGGCGGT 50 0.001508009 13.289857 6 TTATACA 315 0.0 12.371277 2 TATACAC 315 0.0 12.371277 3 AGTAGTC 55 0.0030693812 12.090222 5 ATGGTCG 55 0.0030779387 12.08573 15 TCGATAA 55 0.0030830828 12.0830345 18 ATTTGCG 55 0.0030830828 12.0830345 16 GTGTTAG 105 2.6672933E-7 11.779192 1 GCCCTAT 90 7.3373867E-6 11.628179 1 GTCGTAG 60 0.005811076 11.099624 1 TTACACT 60 0.005853087 11.088888 4 TCTATAC 60 0.005853087 11.088888 3 GTGTTAA 70 0.0014730139 10.873101 1 GAATAGG 105 3.404035E-6 10.8731 1 CCCTATA 70 0.0014849546 10.862585 2 ATAGAAC 70 0.0014849546 10.862585 3 >>END_MODULE