##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921170_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2212327 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.504688050184264 31.0 26.0 31.0 7.0 34.0 2 26.062761969636497 31.0 26.0 31.0 7.0 34.0 3 25.939143264083473 31.0 26.0 31.0 7.0 34.0 4 29.71065579365076 35.0 30.0 37.0 7.0 37.0 5 29.37876769573395 35.0 28.0 37.0 2.0 37.0 6 29.662096064460634 35.0 30.0 37.0 2.0 37.0 7 29.685907643851927 35.0 30.0 37.0 2.0 37.0 8 29.373401400425887 35.0 29.0 37.0 2.0 37.0 9 30.900552223970507 37.0 30.0 39.0 2.0 39.0 10 30.248765666196725 35.0 28.0 39.0 2.0 39.0 11 30.67950578734518 37.0 30.0 39.0 2.0 39.0 12 30.397300218276953 37.0 29.0 39.0 2.0 39.0 13 30.382041172032885 37.0 30.0 39.0 2.0 39.0 14 31.419367028472735 37.0 30.0 40.0 2.0 41.0 15 31.056393562072877 37.0 29.0 40.0 2.0 41.0 16 30.985055102613675 37.0 29.0 40.0 2.0 41.0 17 31.277752339504964 37.0 30.0 40.0 2.0 41.0 18 31.33136059904345 38.0 30.0 40.0 2.0 41.0 19 31.04792148719425 38.0 30.0 40.0 2.0 41.0 20 30.89073134306095 37.0 29.0 40.0 2.0 41.0 21 30.84624108461362 37.0 30.0 40.0 2.0 41.0 22 30.100067485502823 37.0 27.0 40.0 2.0 41.0 23 30.15886213927688 37.0 27.0 40.0 2.0 41.0 24 29.758735485305742 37.0 27.0 40.0 2.0 41.0 25 29.28452484646257 37.0 26.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 214385.0 3 9.0 4 1594.0 5 9317.0 6 11204.0 7 9741.0 8 8331.0 9 7797.0 10 7448.0 11 6986.0 12 6799.0 13 6611.0 14 6506.0 15 6970.0 16 7146.0 17 8144.0 18 9149.0 19 11361.0 20 14089.0 21 17852.0 22 21731.0 23 25603.0 24 29564.0 25 33168.0 26 37255.0 27 41208.0 28 45559.0 29 53236.0 30 62086.0 31 73527.0 32 90541.0 33 113050.0 34 142222.0 35 178939.0 36 228312.0 37 290371.0 38 374516.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.55946155533098 17.82876754139056 11.963437490815286 25.648333412463174 2 16.138322274401407 20.05396204024631 38.30228511060138 25.505430574750903 3 18.9995732322593 23.27091252346318 29.915152786467846 27.814361457809667 4 13.75320343151991 15.557884182360409 35.23315827946626 35.45575410665342 5 14.102004245731663 36.57350648974912 34.13433545619917 15.190153808320042 6 33.86882212204534 34.393206373973975 16.965080375300197 14.772891128680488 7 29.491125490736742 31.262953528897246 20.715475525882194 18.53044545448381 8 26.351539796399447 34.62036556971043 20.32778052256661 18.700314111323515 9 26.737230385342997 15.786473554426959 19.204180482192946 38.272115578037095 10 15.914076579987151 27.9587876409934 33.12185924821302 23.00527653080643 11 35.57357262329913 22.73459608516794 22.06731160435785 19.62451968717508 12 23.314478108998657 24.75847818313572 29.341188245297833 22.585855462567793 13 28.693953643120558 21.219343062063828 25.252085987246748 24.834617307568863 14 22.423997750425638 20.90476651172211 25.92837890499617 30.74285683285608 15 24.52723148457044 28.085076182701062 22.93179313456126 24.455899198167238 16 24.3854488170178 27.327146599723097 24.614376649813213 23.67302793344589 17 23.205390475777044 27.361973288186608 25.730378537940613 23.702257698095735 18 23.16582957739538 27.073316180124067 26.336189338154682 23.424664904325873 19 24.298307438653186 26.53178858873956 26.594583206937877 22.57532076566938 20 24.803547936473493 25.883751734863175 26.21092319585532 23.101777132808017 21 25.145988371567306 25.713394399182572 25.621072239151466 23.51954499009865 22 24.30023777450298 25.160158757424806 26.761836740229093 23.777766727843122 23 24.33184852716662 25.585894145511606 26.027764503985377 24.054492823336396 24 24.075716601613532 25.87460070758278 26.058141858322507 23.991540832481178 25 23.98727779508422 25.5345496686396 26.595565937404352 23.88260659887182 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 912.0 1 912.0 2 978.0 3 1044.0 4 1044.0 5 1044.0 6 1282.0 7 1520.0 8 1520.0 9 1520.0 10 2226.5 11 2933.0 12 2933.0 13 2933.0 14 4844.0 15 6755.0 16 6755.0 17 6755.0 18 11942.0 19 17129.0 20 17129.0 21 17129.0 22 26754.0 23 36379.0 24 36379.0 25 36379.0 26 53124.5 27 69870.0 28 69870.0 29 69870.0 30 91098.0 31 112326.0 32 112326.0 33 112326.0 34 135894.0 35 159462.0 36 159462.0 37 159462.0 38 185322.5 39 211183.0 40 211183.0 41 211183.0 42 233730.0 43 256277.0 44 256277.0 45 256277.0 46 274913.5 47 293550.0 48 293550.0 49 293550.0 50 296432.0 51 299314.0 52 299314.0 53 299314.0 54 281326.5 55 263339.0 56 263339.0 57 263339.0 58 233696.0 59 204053.0 60 204053.0 61 204053.0 62 170749.5 63 137446.0 64 137446.0 65 137446.0 66 107680.5 67 77915.0 68 77915.0 69 77915.0 70 57571.5 71 37228.0 72 37228.0 73 37228.0 74 26246.0 75 15264.0 76 15264.0 77 15264.0 78 10489.5 79 5715.0 80 5715.0 81 5715.0 82 3836.0 83 1957.0 84 1957.0 85 1957.0 86 1274.0 87 591.0 88 591.0 89 591.0 90 361.0 91 131.0 92 131.0 93 131.0 94 76.5 95 22.0 96 22.0 97 22.0 98 17.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034895383910244736 2 0.05166505674794006 3 0.015865647347792618 4 0.011119513525803372 5 0.010079884212415253 6 8.136229409124419E-4 7 0.004158517253552481 8 0.002440868822737326 9 0.0064185809783092644 10 0.0035256994106205816 11 0.010260689310395796 12 0.009401865094988218 13 0.008362235781600098 14 0.015956049896782887 15 0.006554184801794672 16 0.03222850871503173 17 0.03937031008526316 18 0.022419832149587288 19 0.016001251171278028 20 0.015232829504860717 21 0.022917046169033783 22 0.006644587350784943 23 0.016543666465219653 24 0.013063168329094207 25 0.46073659092891783 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2212327.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.58058092649721 #Duplication Level Percentage of deduplicated Percentage of total 1 73.83337645555518 40.29868578708964 2 12.308159326324185 13.435729723333173 3 5.326433700421901 8.721595369064989 4 2.795090383487696 6.102306274912973 5 1.632632539141429 4.455501621292069 6 1.04194043490516 3.412182853675847 7 0.6830514672522872 2.6096942119728284 8 0.4893045907405931 2.1365223050098834 9 0.3490937939670952 1.7148367865303087 >10 1.474846581020392 13.378248601710657 >50 0.04863770087959575 1.787541832349496 >100 0.016323318930037738 1.4430851630207109 >500 8.536210572366681E-4 0.3203606318492757 >1k 2.5608631717095816E-4 0.1837088381881231 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8080509798054265E-4 2 0.0 0.0 0.0 0.0 1.8080509798054265E-4 3 0.0 0.0 0.0 0.0 1.8080509798054265E-4 4 0.0 0.0 0.0 0.0 1.8080509798054265E-4 5 0.0 0.0 0.0 0.0 1.8080509798054265E-4 6 0.0 0.0 0.0 0.0 2.2600637247567832E-4 7 0.0 0.0 0.0 0.0 2.2600637247567832E-4 8 0.0 0.0 0.0 0.0 2.71207646970814E-4 9 0.0 0.0 0.0 4.520127449513566E-5 3.1640892146594967E-4 10 0.0 0.0 0.0 4.520127449513566E-5 4.06811470456221E-4 11 0.0 0.0 0.0 4.520127449513566E-5 4.06811470456221E-4 12 0.0 0.0 0.0 4.520127449513566E-5 8.13622940912442E-4 13 0.0 0.0 0.0 4.520127449513566E-5 9.49226764397849E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 40 0.005291681 14.245269 4 GTGTTAT 120 7.385097E-10 12.669623 1 GGTATCA 1090 0.0 12.46621 1 GTACTAG 85 3.9351653E-6 12.296987 1 CCGTACA 55 0.0030689873 12.090995 2 TACACCG 55 0.0030767922 12.086896 5 TTCGCCG 60 0.0058826143 11.081909 15 ACCGTCC 115 8.866573E-7 10.734838 8 GCGAATC 90 9.530742E-5 10.554199 15 GTATCAA 2335 0.0 10.336458 1 GCGTAGA 120 1.5197656E-6 10.294068 1 CGTACAC 95 1.6500553E-4 9.99668 3 GTATTAG 215 1.0913936E-11 9.723198 1 TAGACAG 375 0.0 9.623471 5 TGTACCG 200 2.6739144E-10 9.496846 5 CTGATCG 100 2.7671104E-4 9.496202 9 TACCGTA 80 0.004531646 9.496202 7 CTGCTAG 185 6.672053E-9 9.2454 1 ATATAAC 155 4.281883E-7 9.190496 3 CCGTATG 115 1.1157005E-4 9.0833235 9 >>END_MODULE