##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921170_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2212327 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.009114837001945 31.0 30.0 33.0 26.0 34.0 2 30.243063073406418 31.0 30.0 34.0 27.0 34.0 3 30.371061330445272 31.0 30.0 34.0 27.0 34.0 4 34.08741610078438 35.0 35.0 37.0 30.0 37.0 5 33.736911405954004 35.0 35.0 37.0 28.0 37.0 6 33.73045756798159 37.0 35.0 37.0 29.0 37.0 7 33.60206470381639 37.0 35.0 37.0 28.0 37.0 8 33.56324042512703 37.0 35.0 37.0 28.0 37.0 9 35.001705896099445 39.0 35.0 39.0 28.0 39.0 10 34.876118223029415 39.0 35.0 39.0 28.0 39.0 11 34.9330980456325 39.0 35.0 39.0 28.0 39.0 12 34.812138079045276 39.0 35.0 39.0 27.0 39.0 13 34.8049736770378 39.0 35.0 39.0 27.0 39.0 14 35.80598618558649 39.0 36.0 41.0 27.0 41.0 15 35.809593699303946 39.0 36.0 41.0 27.0 41.0 16 35.79228613129976 39.0 36.0 41.0 27.0 41.0 17 35.776561963941134 39.0 36.0 41.0 27.0 41.0 18 35.726330239607435 39.0 36.0 41.0 27.0 41.0 19 35.77002585964914 40.0 36.0 41.0 27.0 41.0 20 35.70941095055116 40.0 36.0 41.0 27.0 41.0 21 35.648978654602146 39.0 36.0 41.0 27.0 41.0 22 35.569791445839606 39.0 36.0 41.0 27.0 41.0 23 35.45846793896201 39.0 36.0 41.0 27.0 41.0 24 35.3935629769017 39.0 36.0 41.0 27.0 41.0 25 35.265495109900115 39.0 35.0 41.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 52598.0 3 10.0 4 785.0 5 6711.0 6 7939.0 7 6103.0 8 4824.0 9 4151.0 10 3674.0 11 3497.0 12 3272.0 13 3214.0 14 3062.0 15 3056.0 16 3200.0 17 3280.0 18 3916.0 19 4571.0 20 5656.0 21 7451.0 22 9622.0 23 11762.0 24 14279.0 25 16763.0 26 19361.0 27 22155.0 28 25980.0 29 31999.0 30 41025.0 31 53438.0 32 69150.0 33 90507.0 34 120943.0 35 160979.0 36 222200.0 37 337353.0 38 833841.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.70642659703423 19.063509436984436 9.350019297935235 30.880044668046104 2 15.31979675698936 20.908663140665915 35.20026650671442 28.571273595630302 3 18.234052145742545 23.750881237454095 27.983534256226545 30.03153236057682 4 13.418917873845565 16.08703537123493 33.79124047383553 36.70280628108398 5 14.557896422300443 37.36596856791604 32.951581781223794 15.12455322855972 6 34.20865515833858 35.295691767623325 16.212476601907646 14.28317647213045 7 30.002870296499367 31.64626194732667 19.606746778826704 18.744120977347258 8 27.4759906810483 35.10599539115098 18.63388037424071 18.784133553560014 9 26.96252722247987 15.576366231739808 18.93220076968765 38.52890577609268 10 16.51681690816954 28.58682283405663 31.463929156946506 23.43243110082732 11 36.033359324677086 22.474827948604943 21.77138918082065 19.720423545897322 12 23.55858785794324 24.776581400489167 28.874393342394683 22.79043739917291 13 28.847158713886135 20.954044373568237 25.205757968601116 24.993038943944516 14 22.66671309866181 20.561760809798116 25.8438826675543 30.927643423985774 15 24.72332664500722 28.099876391052774 22.50012885351119 24.676668110428814 16 24.80938493304742 27.24186281139369 24.01469593800513 23.93405631755376 17 23.351990963336693 27.152976444195936 25.741336813238224 23.753695779229144 18 23.2445963849785 26.877924881648664 26.415503720388433 23.461975012984407 19 24.434075995347758 26.30464586779082 26.38641719105334 22.874860945808077 20 24.818064294496274 25.746094597526582 26.086370868590443 23.349470239386708 21 24.992450735397824 25.507925371676965 25.80374805165686 23.69587584126835 22 24.84023544535641 25.316930025430338 25.576657605280978 24.266176923932274 23 24.412749971409884 25.44461585958162 25.81034333904533 24.332290829963167 24 24.07251792629505 25.858163600636995 25.912000119335353 24.1573183537326 25 24.20762837536479 25.58025596964407 26.03650046525528 24.175615189735858 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 425.0 1 425.0 2 478.0 3 531.0 4 531.0 5 531.0 6 818.5 7 1106.0 8 1106.0 9 1106.0 10 1588.0 11 2070.0 12 2070.0 13 2070.0 14 3297.0 15 4524.0 16 4524.0 17 4524.0 18 9394.5 19 14265.0 20 14265.0 21 14265.0 22 23552.5 23 32840.0 24 32840.0 25 32840.0 26 49345.5 27 65851.0 28 65851.0 29 65851.0 30 85940.5 31 106030.0 32 106030.0 33 106030.0 34 128437.0 35 150844.0 36 150844.0 37 150844.0 38 176473.0 39 202102.0 40 202102.0 41 202102.0 42 224781.0 43 247460.0 44 247460.0 45 247460.0 46 269359.0 47 291258.0 48 291258.0 49 291258.0 50 299395.5 51 307533.0 52 307533.0 53 307533.0 54 290110.5 55 272688.0 56 272688.0 57 272688.0 58 243497.5 59 214307.0 60 214307.0 61 214307.0 62 180933.5 63 147560.0 64 147560.0 65 147560.0 66 116101.0 67 84642.0 68 84642.0 69 84642.0 70 62645.5 71 40649.0 72 40649.0 73 40649.0 74 28469.5 75 16290.0 76 16290.0 77 16290.0 78 11236.5 79 6183.0 80 6183.0 81 6183.0 82 4190.5 83 2198.0 84 2198.0 85 2198.0 86 1448.5 87 699.0 88 699.0 89 699.0 90 443.0 91 187.0 92 187.0 93 187.0 94 130.0 95 73.0 96 73.0 97 73.0 98 42.5 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10152206251607471 2 0.0 3 0.04285080822138861 4 0.053337503904260085 5 0.06621986713537376 6 0.003344894312640039 7 5.42415293941628E-4 8 0.0027572777442032756 9 4.520127449513566E-5 10 0.0 11 0.0023504662737470544 12 0.0 13 8.588242154075776E-4 14 0.05460313959012389 15 0.023188253816004596 16 6.78019117427035E-4 17 2.71207646970814E-4 18 0.0026216739207178684 19 0.00271207646970814 20 3.1640892146594967E-4 21 0.008633443428570912 22 4.0681147045622094E-4 23 0.001084830587883256 24 0.003344894312640039 25 0.17456732210021395 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2212327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.63766809315113 #Duplication Level Percentage of deduplicated Percentage of total 1 60.863363075578626 24.124817846227355 2 16.157475339800573 12.808892894845789 3 7.881906358624029 9.3726116455331 4 4.415473970848107 7.000763669217013 5 2.7389705194489777 5.428320218342216 6 1.8096865519908276 4.30390529402709 7 1.2611406566053893 3.499207233571218 8 0.9169853301805959 2.907772813118965 9 0.6669039850328944 2.3791066927860323 >10 3.112693925379129 20.69077661768561 >50 0.12980124882349256 3.4732768924081094 >100 0.04306773466283987 2.8835130627274315 >500 0.0014957699690609564 0.3660857439425496 >1k 0.0010355330555037008 0.7609493755676155 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3947 0.17840943043230048 No Hit TATCAACGCAGAGTACTTTTTTTTT 2356 0.10649420271053962 No Hit GGTATCAACGCAGAGTACTTTTTTT 2305 0.1041889377112877 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.35603823485407E-4 2 0.0 0.0 0.0 0.0 1.35603823485407E-4 3 0.0 0.0 0.0 0.0 1.35603823485407E-4 4 0.0 0.0 0.0 0.0 1.8080509798054265E-4 5 0.0 0.0 0.0 0.0 1.8080509798054265E-4 6 0.0 0.0 0.0 0.0 1.8080509798054265E-4 7 0.0 0.0 0.0 0.0 2.2600637247567832E-4 8 0.0 0.0 0.0 0.0 3.616101959610853E-4 9 0.0 0.0 0.0 4.520127449513566E-5 4.5201274495135663E-4 10 0.0 0.0 0.0 4.520127449513566E-5 5.42415293941628E-4 11 0.0 0.0 0.0 4.520127449513566E-5 5.876165684367636E-4 12 0.0 0.0 0.0 4.520127449513566E-5 0.001220434411368663 13 0.0 0.0 0.0 4.520127449513566E-5 0.0014464407838443412 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATTT 45 6.789731E-4 14.770358 15 ACGGATT 40 0.00527941 14.250255 13 ACGGTAT 50 0.0014996952 13.300238 11 GGTATCA 1260 0.0 12.533105 1 ATCGGAC 85 5.2958723E-5 11.1824875 3 TATCGGA 85 5.2958723E-5 11.1824875 2 CGTGCGC 85 5.324017E-5 11.17667 10 GACGGTT 85 5.360928E-5 11.169092 18 CGCCGAA 60 0.0058762096 11.083531 12 GTATCAA 2790 0.0 10.638283 1 CGGACTG 120 1.524415E-6 10.291617 5 GACAGTC 210 7.2759576E-12 9.945136 7 GCTCTAA 115 1.0101145E-5 9.926692 1 TCGGACT 135 6.399805E-7 9.856933 4 GTATAAA 175 2.5138434E-9 9.784882 1 GACTAGA 80 0.004465746 9.513081 1 GTACTAG 110 6.736035E-5 9.513079 1 CTAAGAC 240 1.8189894E-12 9.505115 3 TAAAACG 90 0.0011086646 9.504899 4 TTCGCCT 160 6.705159E-8 9.493729 17 >>END_MODULE