##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921163_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3229311 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.302582811008293 31.0 28.0 31.0 12.0 34.0 2 27.062821450148345 31.0 27.0 31.0 10.0 34.0 3 26.835640481824143 31.0 27.0 31.0 10.0 34.0 4 30.703712649540414 35.0 31.0 37.0 16.0 37.0 5 30.493683327496175 35.0 30.0 37.0 10.0 37.0 6 31.04387870973096 35.0 32.0 37.0 11.0 37.0 7 31.041030424136913 35.0 32.0 37.0 11.0 37.0 8 30.668424317137617 35.0 31.0 37.0 10.0 37.0 9 32.351421402274354 37.0 32.0 39.0 10.0 39.0 10 31.713992551352284 37.0 31.0 39.0 10.0 39.0 11 32.17695756153557 37.0 32.0 39.0 10.0 39.0 12 31.86749433547899 37.0 32.0 39.0 8.0 39.0 13 31.878981305919435 37.0 32.0 39.0 8.0 39.0 14 33.004878749677566 38.0 32.0 40.0 2.0 41.0 15 32.66424788445585 38.0 32.0 40.0 2.0 41.0 16 32.58488079965045 38.0 32.0 40.0 2.0 41.0 17 32.90676710914495 38.0 32.0 40.0 2.0 41.0 18 32.96157601420241 38.0 32.0 40.0 2.0 41.0 19 32.6614770147564 38.0 32.0 40.0 2.0 41.0 20 32.538798214232074 38.0 32.0 40.0 2.0 41.0 21 32.49293703827225 38.0 32.0 40.0 2.0 41.0 22 31.729672056980576 38.0 30.0 40.0 2.0 41.0 23 31.843055066545155 38.0 31.0 40.0 2.0 41.0 24 31.49091307712388 38.0 30.0 40.0 2.0 41.0 25 30.988397215381237 38.0 30.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 240099.0 3 17.0 4 1824.0 5 10105.0 6 12584.0 7 11252.0 8 9840.0 9 9092.0 10 8659.0 11 8230.0 12 8051.0 13 7791.0 14 7834.0 15 8164.0 16 8676.0 17 9703.0 18 11265.0 19 13803.0 20 17010.0 21 21556.0 22 26211.0 23 31335.0 24 36152.0 25 41062.0 26 46753.0 27 52057.0 28 57761.0 29 68547.0 30 81247.0 31 97225.0 32 122247.0 33 155432.0 34 201653.0 35 263930.0 36 355435.0 37 485278.0 38 681431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.768535598863394 17.651501282290756 11.823250491681605 25.75671262716424 2 16.168377272463918 19.441357363918616 38.62698362781861 25.763281735798856 3 19.170849018766773 22.91197006979276 29.906142908687162 28.01103800275331 4 13.653344862304259 15.554324339641749 34.70338965991291 36.08894113814108 5 14.181091135223124 36.442816422649216 34.34625661659137 15.029835825536294 6 34.576992025179536 33.9920645070788 16.890064655099003 14.54087881264266 7 29.79807004173494 31.18306175327613 20.31695884012983 18.7019093648591 8 26.76725355252988 33.971252749866224 20.325846760608044 18.93564693699586 9 27.025325432645648 15.532073162498614 18.92036941722828 38.52223198762746 10 15.758167327716269 27.732094061454077 32.916461249941165 23.59327736088849 11 36.20203056281022 22.245077899767633 21.86492418449673 19.68796735292542 12 23.295990872806463 24.165353579648638 29.373942407507887 23.164713140037012 13 28.774397102325374 20.867729180396104 25.327276691259904 25.03059702601862 14 22.705618333869133 20.28662465753764 25.667720301707558 31.34003670688567 15 24.60876216666512 27.797690385276436 22.768843427445955 24.82470402061249 16 24.423721752167133 27.037166102135924 24.607500127774447 23.931612017922497 17 23.57003854286771 27.072910516236515 25.50421394172536 23.852836999170407 18 23.630422958891007 26.840247191651585 26.098034187081165 23.431295662376247 19 24.66461182434567 26.06497902004338 26.328018245810515 22.942390909800434 20 24.860621808997447 25.75686670455478 25.875796153685343 23.506715332762433 21 25.317802056754328 25.332700238061168 25.59303124405699 23.756466461127516 22 24.220625506328645 24.80378603759281 26.852450568698423 24.12313788738012 23 24.77179694209606 25.098480463253836 25.814997647742377 24.314724946907734 24 24.311785678006625 25.426487239140076 25.91364461853688 24.34808246431642 25 23.917060311599403 25.154074540063114 26.67187482013359 24.25699032820389 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1064.0 1 1064.0 2 1142.5 3 1221.0 4 1221.0 5 1221.0 6 1685.5 7 2150.0 8 2150.0 9 2150.0 10 2941.0 11 3732.0 12 3732.0 13 3732.0 14 6006.5 15 8281.0 16 8281.0 17 8281.0 18 14982.5 19 21684.0 20 21684.0 21 21684.0 22 34367.0 23 47050.0 24 47050.0 25 47050.0 26 69174.5 27 91299.0 28 91299.0 29 91299.0 30 121727.5 31 152156.0 32 152156.0 33 152156.0 34 187800.0 35 223444.0 36 223444.0 37 223444.0 38 263670.5 39 303897.0 40 303897.0 41 303897.0 42 340163.5 43 376430.0 44 376430.0 45 376430.0 46 404807.0 47 433184.0 48 433184.0 49 433184.0 50 437912.5 51 442641.0 52 442641.0 53 442641.0 54 418478.5 55 394316.0 56 394316.0 57 394316.0 58 348274.0 59 302232.0 60 302232.0 61 302232.0 62 254523.5 63 206815.0 64 206815.0 65 206815.0 66 163088.0 67 119361.0 68 119361.0 69 119361.0 70 89553.5 71 59746.0 72 59746.0 73 59746.0 74 42080.5 75 24415.0 76 24415.0 77 24415.0 78 16859.0 79 9303.0 80 9303.0 81 9303.0 82 6340.5 83 3378.0 84 3378.0 85 3378.0 86 2280.5 87 1183.0 88 1183.0 89 1183.0 90 731.0 91 279.0 92 279.0 93 279.0 94 160.5 95 42.0 96 42.0 97 42.0 98 25.0 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03418685905445465 2 0.05270474104228425 3 0.014430322753057851 4 0.010652427096677899 5 0.00950667185662824 6 6.812598724619586E-4 7 0.003777895656379952 8 0.0019508805438683359 9 0.006967430513815485 10 0.003189534857435533 11 0.010962090675069697 12 0.008639613837131202 13 0.007400959523564005 14 0.01514254898335899 15 0.006224237925675167 16 0.029913501672647818 17 0.037686057490281984 18 0.022388676717727096 19 0.01594767428717767 20 0.01566897706662505 21 0.022574474864762172 22 0.005666843484569929 23 0.01542124620391161 24 0.011612384189692475 25 0.46821133052840064 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3229311.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.60960296631501 #Duplication Level Percentage of deduplicated Percentage of total 1 69.32317913311137 32.31125855757055 2 12.730719640366289 11.867475758258827 3 6.099573944534086 8.528961594552413 4 3.506322986640817 6.537132891159694 5 2.1844071533624816 5.090717506750182 6 1.4293042586709968 3.997158240883102 7 0.9966103969834337 3.2516130440849604 8 0.7473709402692927 2.7867730235610613 9 0.5463826570549916 2.292001084171207 >10 2.324246022572352 17.715902035430883 >50 0.07901070321656212 2.497346047136301 >100 0.031504281800267486 2.4582345678531436 >500 8.891229211816272E-4 0.2969136002433974 >1k 4.7875849592568135E-4 0.36851204834420215 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.289907351753981E-5 2 0.0 0.0 0.0 0.0 9.289907351753981E-5 3 0.0 0.0 0.0 0.0 9.289907351753981E-5 4 0.0 0.0 0.0 0.0 9.289907351753981E-5 5 0.0 0.0 0.0 0.0 9.289907351753981E-5 6 0.0 0.0 0.0 0.0 2.1676450487425955E-4 7 0.0 0.0 0.0 0.0 2.1676450487425955E-4 8 0.0 0.0 0.0 0.0 2.1676450487425955E-4 9 0.0 0.0 0.0 0.0 2.1676450487425955E-4 10 0.0 0.0 0.0 0.0 2.1676450487425955E-4 11 0.0 0.0 0.0 3.096635783917993E-5 2.1676450487425955E-4 12 0.0 0.0 0.0 3.096635783917993E-5 4.025626519093392E-4 13 0.0 0.0 0.0 3.096635783917993E-5 5.264280832660589E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAAA 40 0.005274852 14.252394 1 GGTATCA 1425 0.0 12.668795 1 GTATCAA 3160 0.0 10.854671 1 TTAGTAC 140 8.411007E-9 10.85325 3 TATACCG 95 1.6518083E-4 9.995949 5 TATACTG 425 0.0 9.831311 5 GTTCTAG 290 0.0 9.829237 1 GTATAAC 260 0.0 9.5015955 1 CGCACGA 90 0.0011158024 9.498506 12 CGGAAAT 120 1.7070008E-5 9.497476 10 CGATCAA 80 0.004527589 9.497476 10 TGGACCG 300 0.0 9.496152 5 AATACCG 100 2.7681421E-4 9.496152 5 TAGGACT 360 0.0 9.232512 4 GTTCTAA 310 0.0 9.195093 1 AGGACTG 580 0.0 9.168698 5 GAATCGA 125 2.7695794E-5 9.116164 6 CTAGACA 230 4.1836756E-11 9.083417 4 GTCCTAG 420 0.0 9.049139 1 TTCTAGG 275 0.0 8.981796 2 >>END_MODULE