##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921162_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3624864 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.58717789136365 31.0 30.0 33.0 26.0 34.0 2 29.863845098740256 31.0 30.0 34.0 26.0 34.0 3 30.004599896713366 31.0 30.0 34.0 26.0 34.0 4 33.688339479770825 35.0 35.0 37.0 30.0 37.0 5 33.212413210537 35.0 35.0 37.0 27.0 37.0 6 33.152583379679896 36.0 35.0 37.0 27.0 37.0 7 33.00295017964812 36.0 35.0 37.0 26.0 37.0 8 32.95111292451248 36.0 35.0 37.0 26.0 37.0 9 34.36844334021911 39.0 35.0 39.0 27.0 39.0 10 34.25303376899106 38.0 35.0 39.0 26.0 39.0 11 34.257498212346725 38.0 35.0 39.0 26.0 39.0 12 34.12425762732064 38.0 35.0 39.0 25.0 39.0 13 34.10765617689381 38.0 35.0 39.0 25.0 39.0 14 35.06690678602011 39.0 35.0 41.0 25.0 41.0 15 35.04711514694068 39.0 35.0 41.0 25.0 41.0 16 35.030827363454186 39.0 35.0 41.0 25.0 41.0 17 34.99971198919463 39.0 35.0 41.0 25.0 41.0 18 34.95144645426697 39.0 35.0 41.0 25.0 41.0 19 34.99292690705086 39.0 35.0 41.0 24.0 41.0 20 34.927865431641024 39.0 35.0 41.0 24.0 41.0 21 34.85744237576913 39.0 35.0 41.0 23.0 41.0 22 34.77501004175605 39.0 35.0 41.0 23.0 41.0 23 34.649829069449225 39.0 34.0 41.0 21.0 41.0 24 34.56821166256169 39.0 34.0 41.0 19.0 41.0 25 34.42709354061284 39.0 34.0 41.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 114914.0 3 9.0 4 1867.0 5 16286.0 6 18154.0 7 13400.0 8 10760.0 9 9038.0 10 8312.0 11 7667.0 12 6903.0 13 6747.0 14 6562.0 15 6509.0 16 6604.0 17 6980.0 18 7703.0 19 9280.0 20 11512.0 21 14784.0 22 18435.0 23 22729.0 24 26786.0 25 31335.0 26 35418.0 27 39455.0 28 45490.0 29 55312.0 30 69747.0 31 89214.0 32 113736.0 33 146881.0 34 193530.0 35 256734.0 36 351762.0 37 531747.0 38 1312562.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.56228492906612 18.47766023811516 9.111344367830567 31.848710464988155 2 14.78320290085366 20.633849987199522 34.886357115742825 29.696589996203997 3 18.053268011374676 23.271913692000638 27.9684105480686 30.706407748556085 4 13.13832064473763 15.77218990688712 33.33751977403157 37.75196967434368 5 14.544121930043714 37.24387527071104 32.832689884206765 15.37931291503849 6 34.58066378002678 34.905728050712455 16.117443607611946 14.396164561648817 7 30.11054555486585 31.41794606524588 19.453948548175738 19.017559831712532 8 27.964133231250994 34.779067601961636 18.494423407205083 18.76237575958229 9 26.980684691345424 15.340821469607665 18.594257133753306 39.084236705293605 10 16.342400106818303 28.502030568462615 31.44088564289748 23.714683681821604 11 36.32539649037423 22.29265973768992 21.4473267817891 19.93461699014675 12 23.471181491799125 24.47662777410867 28.744601857507245 23.30758887658496 13 28.98971191655868 20.782226508885337 24.981798388215896 25.246263186340084 14 22.764101748772525 20.064125707585447 25.474980705978993 31.696791837663035 15 24.62659839066873 27.837893620344172 22.44700359867267 25.08850439031443 16 24.7736150249767 26.869058963553826 24.040150329224534 24.31717568224494 17 23.529970006819642 26.91234112332075 25.576855593540543 23.98083327631907 18 23.67047568018854 26.598791051830155 26.25065768182023 23.480075586161078 19 24.691750067249263 25.931316085334146 26.0165674596332 23.360366387783397 20 24.90671922299906 25.664497081087585 25.707340717814375 23.721442978098985 21 25.173872374945162 25.231374561628606 25.65836416763929 23.936388895786944 22 24.81005764757293 25.0919503065562 25.488139431204726 24.609852614666142 23 24.555970345879217 25.23276432169275 25.568250634761625 24.64301469766641 24 24.206687738520657 25.5448038088259 25.80639020158789 24.442118251065548 25 24.259744293640612 25.318886821223863 25.867429080532634 24.55393980460289 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 816.0 1 816.0 2 899.0 3 982.0 4 982.0 5 982.0 6 1391.5 7 1801.0 8 1801.0 9 1801.0 10 2489.0 11 3177.0 12 3177.0 13 3177.0 14 5042.5 15 6908.0 16 6908.0 17 6908.0 18 13325.5 19 19743.0 20 19743.0 21 19743.0 22 33346.5 23 46950.0 24 46950.0 25 46950.0 26 71278.0 27 95606.0 28 95606.0 29 95606.0 30 126507.0 31 157408.0 32 157408.0 33 157408.0 34 194127.0 35 230846.0 36 230846.0 37 230846.0 38 275239.5 39 319633.0 40 319633.0 41 319633.0 42 362466.0 43 405299.0 44 405299.0 45 405299.0 46 444164.0 47 483029.0 48 483029.0 49 483029.0 50 500741.5 51 518454.0 52 518454.0 53 518454.0 54 492631.5 55 466809.0 56 466809.0 57 466809.0 58 414957.0 59 363105.0 60 363105.0 61 363105.0 62 305570.0 63 248035.0 64 248035.0 65 248035.0 66 196295.0 67 144555.0 68 144555.0 69 144555.0 70 107584.0 71 70613.0 72 70613.0 73 70613.0 74 48743.5 75 26874.0 76 26874.0 77 26874.0 78 18161.5 79 9449.0 80 9449.0 81 9449.0 82 6424.5 83 3400.0 84 3400.0 85 3400.0 86 2221.0 87 1042.0 88 1042.0 89 1042.0 90 659.5 91 277.0 92 277.0 93 277.0 94 163.5 95 50.0 96 50.0 97 50.0 98 26.5 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10138311395958578 2 0.0 3 0.037960044845820426 4 0.05674695657547428 5 0.06783702781676774 6 0.009655534662817695 7 0.003144945575889192 8 0.00935207500198628 9 5.24157595981532E-4 10 4.6898311219400226E-4 11 0.010345215710161816 12 1.6552345136258904E-4 13 0.005103639750346496 14 0.05462273894965439 15 0.020690431420323632 16 0.007889951181616743 17 0.0011034896757505935 18 0.010786611580462053 19 0.007972712907298039 20 0.0015172983041570663 21 0.018042056198522206 22 0.002206979351501187 23 0.007586491520785331 24 0.01213838643325653 25 0.17054432938725425 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3624864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.8735174006444 #Duplication Level Percentage of deduplicated Percentage of total 1 59.59588705922272 20.783182043666418 2 15.008181238840496 10.467761391694577 3 7.73684966111187 8.094334838488635 4 4.67398670681506 6.519934270019825 5 2.96862858016539 5.176326022322401 6 2.116917521056455 4.4294616003774765 7 1.4999343547097013 3.6615590773155176 8 1.1069434125749067 3.0882408287967764 9 0.8626598424059141 2.7075584722481825 >10 4.16799642482261 24.607498394119723 >50 0.18041741484540363 4.2934971733043685 >100 0.07793357666558126 4.735106257943344 >500 0.002549013406286925 0.5874442526725204 >1k 0.0010355366892631373 0.6997272994436348 >5k 7.965666840485672E-5 0.14836807758658357 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5341 0.14734345895459802 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1034896757505936E-4 2 0.0 0.0 0.0 0.0 1.1034896757505936E-4 3 0.0 0.0 0.0 2.758724189376484E-5 1.1034896757505936E-4 4 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 5 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 6 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 7 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 8 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 9 0.0 0.0 0.0 1.931106932563539E-4 1.1034896757505936E-4 10 0.0 0.0 0.0 2.2069793515011872E-4 1.1034896757505936E-4 11 0.0 0.0 0.0 2.2069793515011872E-4 1.1034896757505936E-4 12 0.0 0.0 0.0 2.2069793515011872E-4 2.7587241893764844E-4 13 0.0 0.0 0.0 2.2069793515011872E-4 4.1380862840647263E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1785 0.0 13.537751 1 CGTAAAC 65 7.995857E-4 11.697892 3 GTATCAA 3950 0.0 10.9347725 1 CTAGGAC 485 0.0 10.58237 3 ACCGTGC 285 0.0 10.331562 8 TGCACCG 210 7.2759576E-12 9.951774 5 CGTGCGC 220 1.8189894E-12 9.931761 10 TTAGGAC 230 0.0 9.917778 3 CTATTAG 195 1.6007107E-10 9.757676 1 TAGGACT 420 0.0 9.504405 4 TAGGACA 475 0.0 9.404359 4 GGTCGGT 165 1.0670192E-7 9.212068 11 CCGTGCG 155 4.267058E-7 9.193241 9 GTGCTAG 445 0.0 9.193048 1 TAGGACG 135 6.813021E-6 9.1523905 4 ACACCGT 270 0.0 9.14229 6 ATTATAC 200 2.6375346E-9 9.02931 3 GTCTTAC 170 1.6499143E-7 8.954103 1 AGGCCGT 160 6.8102236E-7 8.900546 6 TAGGGTA 130 4.3749766E-5 8.768695 5 >>END_MODULE