##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921160_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2595123 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.624673281382037 31.0 30.0 33.0 26.0 34.0 2 29.882066861570724 31.0 30.0 34.0 26.0 34.0 3 29.99176994693508 31.0 30.0 34.0 26.0 34.0 4 33.68057082458134 35.0 35.0 37.0 30.0 37.0 5 33.20296918489027 35.0 35.0 37.0 27.0 37.0 6 33.14547364421648 36.0 35.0 37.0 27.0 37.0 7 33.01290767335498 36.0 35.0 37.0 26.0 37.0 8 32.94257227884767 36.0 35.0 37.0 26.0 37.0 9 34.35122381482496 39.0 35.0 39.0 26.0 39.0 10 34.21655659481265 38.0 35.0 39.0 26.0 39.0 11 34.22423561426568 38.0 35.0 39.0 26.0 39.0 12 34.10056440484709 38.0 35.0 39.0 25.0 39.0 13 34.07878200763509 38.0 35.0 39.0 25.0 39.0 14 35.03637746650159 39.0 35.0 41.0 25.0 41.0 15 35.02331411651779 39.0 35.0 41.0 25.0 41.0 16 35.010189883099954 39.0 35.0 41.0 25.0 41.0 17 34.988788200019805 39.0 35.0 41.0 25.0 41.0 18 34.94376836858985 39.0 35.0 41.0 25.0 41.0 19 34.986798698944135 39.0 35.0 41.0 24.0 41.0 20 34.91760621750876 39.0 35.0 41.0 24.0 41.0 21 34.84173312787101 39.0 35.0 41.0 23.0 41.0 22 34.75955937348634 39.0 35.0 41.0 22.0 41.0 23 34.631009397242444 39.0 34.0 41.0 19.0 41.0 24 34.54956239068437 39.0 34.0 41.0 19.0 41.0 25 34.40704313437167 39.0 34.0 41.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83649.0 3 5.0 4 1312.0 5 11630.0 6 13309.0 7 9934.0 8 7842.0 9 6735.0 10 5964.0 11 5437.0 12 4992.0 13 4807.0 14 4813.0 15 4586.0 16 4717.0 17 5084.0 18 5458.0 19 6476.0 20 8208.0 21 10556.0 22 13190.0 23 16050.0 24 19104.0 25 22040.0 26 24860.0 27 28205.0 28 32470.0 29 38982.0 30 49813.0 31 62883.0 32 80999.0 33 105100.0 34 138127.0 35 182525.0 36 250739.0 37 380391.0 38 944131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.67218929798602 18.771764840207304 9.378688547354583 31.177357314452088 2 14.899447925974993 20.750307403541182 35.37354491482677 28.976699755657055 3 18.1586883537075 23.738605186555557 27.7153550833387 30.387351376398247 4 13.27323184733611 16.211786604897053 33.0736423767525 37.44133917101434 5 14.638757830561024 37.45365291212997 32.65052319427118 15.257066063037824 6 34.423942532988036 34.87059131828833 16.21851492169195 14.486951227031694 7 30.107637512094914 31.708732499222574 19.40958707163002 18.77404291705249 8 27.949295907085403 34.93022271772428 18.372892355347933 18.74758901984239 9 27.262715485932652 15.590744639078762 18.51688725351361 38.629652621474975 10 16.817931173204506 28.684883144267147 30.902774165232245 23.594411517296095 11 36.107827930054434 22.52771328098656 21.57895852401368 19.785500264945323 12 23.86068020667999 24.721255986710457 28.47105898256075 22.947004824048804 13 28.976454294696264 20.97472175744633 25.08614517398204 24.962678773875375 14 22.931797675691932 20.31968875556207 25.565537930023986 31.182975638722016 15 24.848847378151927 27.95434144401196 22.45827139290894 24.73853978492717 16 24.686058157516783 27.013969626822792 23.976497762801895 24.32347445285853 17 23.546359844986153 27.122067046533054 25.613429498332064 23.71814361014873 18 23.57519233222306 26.69721167893901 26.329677257993595 23.397918730844335 19 24.930595269842197 25.85605589990304 26.085658000003082 23.127690830251677 20 24.90224933461728 25.464265084930464 26.012138923665663 23.621346656786596 21 25.262710809405597 25.162810362975474 25.832590439388525 23.7418883882304 22 25.1831996914207 24.92028303904368 25.54653563092868 24.349981638606938 23 24.678080742725484 25.0709927579487 25.87122921421836 24.379697285107454 24 24.320953778610892 25.434211905584057 25.932513133879244 24.312321181925807 25 24.368078237509707 25.294087445873743 25.86695624077629 24.470878075840265 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 788.0 1 788.0 2 858.5 3 929.0 4 929.0 5 929.0 6 1230.0 7 1531.0 8 1531.0 9 1531.0 10 2206.0 11 2881.0 12 2881.0 13 2881.0 14 4123.0 15 5365.0 16 5365.0 17 5365.0 18 10645.0 19 15925.0 20 15925.0 21 15925.0 22 26021.5 23 36118.0 24 36118.0 25 36118.0 26 55235.5 27 74353.0 28 74353.0 29 74353.0 30 97717.5 31 121082.0 32 121082.0 33 121082.0 34 145378.5 35 169675.0 36 169675.0 37 169675.0 38 199873.5 39 230072.0 40 230072.0 41 230072.0 42 257214.5 43 284357.0 44 284357.0 45 284357.0 46 310247.0 47 336137.0 48 336137.0 49 336137.0 50 347058.5 51 357980.0 52 357980.0 53 357980.0 54 342951.0 55 327922.0 56 327922.0 57 327922.0 58 293481.5 59 259041.0 60 259041.0 61 259041.0 62 220085.5 63 181130.0 64 181130.0 65 181130.0 66 143903.5 67 106677.0 68 106677.0 69 106677.0 70 79135.5 71 51594.0 72 51594.0 73 51594.0 74 36076.0 75 20558.0 76 20558.0 77 20558.0 78 14035.5 79 7513.0 80 7513.0 81 7513.0 82 5020.0 83 2527.0 84 2527.0 85 2527.0 86 1636.5 87 746.0 88 746.0 89 746.0 90 468.5 91 191.0 92 191.0 93 191.0 94 110.5 95 30.0 96 30.0 97 30.0 98 15.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10169074837685921 2 0.0 3 0.04123118634453935 4 0.053908812800009864 5 0.07390786486806213 6 0.009363718020301929 7 9.248116563261163E-4 8 0.008631575459043753 9 0.0 10 0.0 11 0.00955638711536987 12 0.0 13 0.0032753746161549957 14 0.06408174101959715 15 0.02157893864760938 16 0.005240599385847993 17 0.0 18 0.010172928219587278 19 0.007668229983704048 20 0.0 21 0.020808262267337615 22 1.5413527605435273E-4 23 0.005394734661902345 24 0.011829882437171571 25 0.17925932605121223 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2595123.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.52693580759371 #Duplication Level Percentage of deduplicated Percentage of total 1 59.69868353956019 20.01513930828686 2 14.231583211447528 9.542827535412593 3 7.522600102258646 7.566291922038704 4 4.6473174583915675 6.232412564200145 5 3.1198369566611452 5.229928668806836 6 2.228878504368009 4.483647992332303 7 1.5735165127035544 3.6928630979520545 8 1.1952462928510916 3.205835658774632 9 0.9121098698447292 2.75222241501812 >10 4.582155099143186 26.26837337061013 >50 0.20253828743834928 4.600126900063222 >100 0.08146659412661011 4.727329439525545 >500 0.002905408003828267 0.6526042014116473 >1k 0.0010459468813776914 0.7976663210516692 >5k 1.1621632015307683E-4 0.23273060451551486 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 5973 0.2301625009681622 No Hit GGTATCAACGCAGAGTACTTTTTTT 3865 0.1489332104875183 No Hit TATCAACGCAGAGTACTTTTTTTTT 3769 0.14523396386221385 No Hit GGTATCAACGCAGAGTACATGGGGG 2854 0.10997551946478068 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1560145704076455E-4 2 0.0 0.0 0.0 0.0 1.1560145704076455E-4 3 0.0 0.0 0.0 0.0 1.1560145704076455E-4 4 0.0 0.0 0.0 0.0 1.1560145704076455E-4 5 0.0 0.0 0.0 0.0 1.1560145704076455E-4 6 0.0 0.0 0.0 0.0 1.1560145704076455E-4 7 0.0 0.0 0.0 0.0 1.1560145704076455E-4 8 0.0 0.0 0.0 0.0 1.1560145704076455E-4 9 0.0 0.0 0.0 3.853381901358818E-5 1.1560145704076455E-4 10 0.0 0.0 0.0 7.706763802717637E-5 1.1560145704076455E-4 11 0.0 0.0 0.0 7.706763802717637E-5 1.1560145704076455E-4 12 0.0 0.0 0.0 7.706763802717637E-5 8.862778373125281E-4 13 0.0 0.0 0.0 7.706763802717637E-5 9.248116563261164E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 40 0.0052826367 14.249075 5 GGTATCA 1710 0.0 14.188454 1 ATTACGA 70 7.271905E-6 13.570547 5 ACCGACC 100 1.4472607E-7 12.347769 8 ATTCGCC 95 1.0407421E-6 11.999916 11 CGATTCG 80 2.8694321E-5 11.874458 9 TCGCGCA 105 2.7438182E-7 11.754795 18 CCGGGTA 85 5.2730844E-5 11.187393 19 GATTCGC 85 5.326196E-5 11.176391 10 TACGATT 85 5.365027E-5 11.168424 7 CCATGCG 90 9.524199E-5 10.555073 9 GTATCAA 3615 0.0 10.448962 1 ACAACCG 110 6.053786E-6 10.362964 5 ATAACCC 180 3.9108272E-10 10.032929 3 CGCCGAA 95 1.644903E-4 9.999929 12 GTTCTAG 125 2.5214613E-6 9.895194 1 GCCGGGT 135 6.500468E-7 9.845897 18 TAGGACA 285 0.0 9.671634 4 GTCGTAG 80 0.004460266 9.514609 1 CTAACAC 260 0.0 9.504881 3 >>END_MODULE