##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921156_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1500828 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.570480428137003 30.0 26.0 31.0 2.0 34.0 2 25.160490076144633 30.0 25.0 31.0 2.0 34.0 3 25.055705250701614 30.0 24.0 31.0 2.0 34.0 4 28.666388820038005 35.0 28.0 37.0 2.0 37.0 5 28.43188360025266 35.0 27.0 37.0 2.0 37.0 6 28.541484433925806 35.0 28.0 37.0 2.0 37.0 7 28.466228641789733 35.0 28.0 37.0 2.0 37.0 8 28.178666709309795 35.0 27.0 37.0 2.0 37.0 9 29.699465228527185 35.0 28.0 39.0 2.0 39.0 10 29.08222327941643 35.0 27.0 39.0 2.0 39.0 11 29.48980829248921 35.0 27.0 39.0 2.0 39.0 12 29.193545163069984 35.0 27.0 39.0 2.0 39.0 13 29.166210251940928 35.0 27.0 39.0 2.0 39.0 14 30.156113825168507 37.0 27.0 40.0 2.0 41.0 15 29.81351027566117 37.0 27.0 40.0 2.0 41.0 16 29.72591995884938 37.0 27.0 40.0 2.0 41.0 17 30.017209167206367 37.0 27.0 40.0 2.0 41.0 18 30.053934894604843 37.0 27.0 40.0 2.0 41.0 19 29.753600012792937 37.0 27.0 40.0 2.0 41.0 20 29.6234205385294 37.0 27.0 40.0 2.0 41.0 21 29.549000285175918 37.0 27.0 40.0 2.0 41.0 22 28.81735948423137 37.0 22.0 40.0 2.0 41.0 23 28.87729373385891 37.0 24.0 40.0 2.0 41.0 24 28.518787629228665 36.0 19.0 40.0 2.0 41.0 25 28.032229542625803 36.0 17.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 191657.0 3 15.0 4 1531.0 5 7981.0 6 9101.0 7 7878.0 8 6529.0 9 6006.0 10 5714.0 11 5353.0 12 5169.0 13 5036.0 14 4934.0 15 4953.0 16 5193.0 17 5653.0 18 6700.0 19 8153.0 20 10229.0 21 12684.0 22 14865.0 23 17369.0 24 19492.0 25 21520.0 26 23872.0 27 26246.0 28 29359.0 29 33750.0 30 39134.0 31 46227.0 32 57203.0 33 71636.0 34 90534.0 35 114659.0 36 148382.0 37 190169.0 38 245942.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38419864800554 18.37450060054576 12.523411953060117 25.71788879838859 2 16.283340999846672 19.925934814637042 37.8709092484817 25.91981493703459 3 18.93681973542777 23.3296303972182 30.27333532807636 27.460214539277665 4 13.580325067919619 16.015702309167033 33.96334039906149 36.440632223851864 5 13.990877499275332 36.415103769278694 34.28920792837937 15.304810803066598 6 33.59528042153181 33.890254075793635 16.846280546797335 15.668184955877217 7 28.831210195326918 31.915968245549276 20.581622984529233 18.671198574594573 8 26.951369676810643 33.72426025725084 20.368112303370488 18.95625776256803 9 27.03028493789286 15.904106914513303 19.151696560235035 37.913911587358804 10 16.353771105041623 28.24635669627597 32.42288776339032 22.976984435292085 11 35.227342394332034 22.82460063812603 21.828494966161195 20.119562001380743 12 23.45367058950529 25.10936570224942 28.787385078553395 22.649578629691895 13 28.453608384814416 21.779180962649086 24.92681811912071 24.840392533415784 14 22.868469928567478 21.53591585103597 25.472201693082063 30.123412527314493 15 24.523611047252746 28.176998061593224 22.950896138312554 24.348494752841475 16 24.087928875215034 27.423619437877456 24.603875498300727 23.884576188606786 17 23.11774308478763 27.498005275272014 25.722450301858345 23.66180133808201 18 23.186802420862442 26.97711430584149 26.468202687581183 23.367880585714886 19 24.424398608253846 26.37973397949167 26.758725569970167 22.43714184228432 20 24.665597752347747 25.792555984720657 26.243512543083114 23.298333719848486 21 25.07597690302148 25.461259777027784 25.970771552114826 23.491991767835913 22 24.42449866232213 24.8353640049709 27.06473827824366 23.675399054463313 23 24.527092273069268 25.276747234526916 26.270244982363216 23.925915510040603 24 24.292296291952436 25.584155433591803 26.21562439192125 23.90792388253451 25 23.769674793972364 25.43168571472561 26.795005934318837 24.003633556983182 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1415.0 1 1415.0 2 1473.5 3 1532.0 4 1532.0 5 1532.0 6 2040.0 7 2548.0 8 2548.0 9 2548.0 10 3160.5 11 3773.0 12 3773.0 13 3773.0 14 4931.0 15 6089.0 16 6089.0 17 6089.0 18 9822.5 19 13556.0 20 13556.0 21 13556.0 22 19644.0 23 25732.0 24 25732.0 25 25732.0 26 36217.0 27 46702.0 28 46702.0 29 46702.0 30 60159.0 31 73616.0 32 73616.0 33 73616.0 34 88043.5 35 102471.0 36 102471.0 37 102471.0 38 119699.0 39 136927.0 40 136927.0 41 136927.0 42 153227.0 43 169527.0 44 169527.0 45 169527.0 46 183594.0 47 197661.0 48 197661.0 49 197661.0 50 201130.5 51 204600.0 52 204600.0 53 204600.0 54 193278.5 55 181957.0 56 181957.0 57 181957.0 58 160532.5 59 139108.0 60 139108.0 61 139108.0 62 117228.0 63 95348.0 64 95348.0 65 95348.0 66 74957.0 67 54566.0 68 54566.0 69 54566.0 70 40221.5 71 25877.0 72 25877.0 73 25877.0 74 18280.0 75 10683.0 76 10683.0 77 10683.0 78 7616.0 79 4549.0 80 4549.0 81 4549.0 82 3122.5 83 1696.0 84 1696.0 85 1696.0 86 1177.0 87 658.0 88 658.0 89 658.0 90 421.0 91 184.0 92 184.0 93 184.0 94 113.0 95 42.0 96 42.0 97 42.0 98 26.5 99 11.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03504732054572542 2 0.05317064980130967 3 0.014458685472285964 4 0.01046089225414238 5 0.009528073836575545 6 0.001066078191504956 7 0.004131052992081704 8 0.0023986759308861506 9 0.007662437001441871 10 0.0040644231051126445 11 0.012259899202306994 12 0.008595255419008708 13 0.007662437001441871 14 0.016724101629233996 15 0.007395917453565631 16 0.031915715858179615 17 0.0413771598077861 18 0.024719688065521165 19 0.017790179820738952 20 0.01599117287257434 21 0.024786317952490224 22 0.006196579488122556 23 0.018056699368615193 24 0.013325977393811951 25 0.46474346160919167 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1500828.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.25714857381833 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68752316425594 43.909089075739374 2 10.90784012897271 12.491036457680964 3 4.642989328658944 7.975329894530344 4 2.5645325426331573 5.873512832637552 5 1.5068501160192989 4.313897048569619 6 0.9346855329836352 3.211045705910555 7 0.6423126885339302 2.574389512676516 8 0.46114474378036685 2.1123066486934285 9 0.3212562412314817 1.6554794701011633 >10 1.2774946470508635 11.900675527087502 >50 0.03612673743141157 1.4251637258488956 >100 0.015328182772472696 1.4906091031550512 >500 0.0014369592568100023 0.5424743438361017 >1k 4.7898641893666746E-4 0.5249906535329917 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3000 0.19988966090717925 No Hit TATCAACGCAGAGTACTTTTTTTTT 1807 0.12040020575309095 No Hit GGTATCAACGCAGAGTACTTTTTTT 1684 0.11220472965589662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.662988696905975E-5 0.0 10 0.0 0.0 0.0 6.662988696905975E-5 0.0 11 0.0 0.0 0.0 6.662988696905975E-5 0.0 12 0.0 0.0 0.0 6.662988696905975E-5 0.0 13 0.0 0.0 0.0 6.662988696905975E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1080 0.0 12.580934 1 AGACCGC 65 8.0516376E-4 11.6873665 6 CAACTCA 295 0.0 11.588321 6 TGTCCGA 60 0.005888171 11.080126 10 TCAACTC 295 0.0 10.94416 5 GCTCTAA 70 0.0014891463 10.859068 1 TATAAGG 105 3.4662935E-6 10.856895 2 TTCGCGC 70 0.0014932934 10.855448 17 GTCCAAA 165 9.258656E-10 10.365473 1 AGAGCGA 110 6.0645125E-6 10.360637 10 ACAGTCC 195 1.4551915E-11 10.226445 8 GTATATA 150 2.4361725E-8 10.13513 1 CTAGTAG 85 6.614277E-4 10.055243 3 TAGGCCC 85 6.614277E-4 10.055243 4 GTATCAA 2190 0.0 9.80539 1 TATACTG 165 1.0288204E-8 9.783416 5 CCCTAGA 175 2.562956E-9 9.773161 1 AACTCAG 395 0.0 9.616187 7 GTTCTAA 90 0.0011116624 9.501684 1 GTATTAT 90 0.0011116624 9.501684 1 >>END_MODULE