##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921152_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1537357 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.45104422720292 31.0 27.0 31.0 7.0 34.0 2 26.209436064622597 31.0 26.0 31.0 7.0 34.0 3 26.041774291852835 31.0 26.0 31.0 7.0 34.0 4 29.785483788085656 35.0 30.0 37.0 7.0 37.0 5 29.552043539659298 35.0 30.0 37.0 2.0 37.0 6 29.85421473346789 35.0 30.0 37.0 2.0 37.0 7 29.78778839267652 35.0 30.0 37.0 2.0 37.0 8 29.40351265190844 35.0 30.0 37.0 2.0 37.0 9 30.96120289561891 37.0 30.0 39.0 2.0 39.0 10 30.304998123402697 37.0 29.0 39.0 2.0 39.0 11 30.74701712094198 37.0 30.0 39.0 2.0 39.0 12 30.446957343024426 37.0 30.0 39.0 2.0 39.0 13 30.428426188582094 37.0 30.0 39.0 2.0 39.0 14 31.470346835510554 38.0 30.0 40.0 2.0 41.0 15 31.101372680515976 38.0 29.0 40.0 2.0 41.0 16 31.033206990959158 37.0 29.0 40.0 2.0 41.0 17 31.359745979626073 38.0 30.0 40.0 2.0 41.0 18 31.413558464299445 38.0 30.0 40.0 2.0 41.0 19 31.109515226456836 38.0 30.0 40.0 2.0 41.0 20 30.97494726338775 38.0 30.0 40.0 2.0 41.0 21 30.909693064135396 38.0 30.0 40.0 2.0 41.0 22 30.162268750849673 37.0 27.0 40.0 2.0 41.0 23 30.23200661915222 37.0 27.0 40.0 2.0 41.0 24 29.852956730284507 37.0 27.0 40.0 2.0 41.0 25 29.360711272658204 37.0 25.0 40.0 2.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 152693.0 3 8.0 4 1263.0 5 6858.0 6 8393.0 7 7419.0 8 6115.0 9 5581.0 10 5211.0 11 4855.0 12 4768.0 13 4557.0 14 4654.0 15 4703.0 16 4968.0 17 5441.0 18 6259.0 19 7845.0 20 9592.0 21 12091.0 22 14426.0 23 16480.0 24 18601.0 25 21096.0 26 23409.0 27 26456.0 28 29098.0 29 34048.0 30 40258.0 31 47579.0 32 59220.0 33 74267.0 34 93942.0 35 120369.0 36 158109.0 37 208152.0 38 288573.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.1938737596784 17.90403299325416 12.052975047485065 24.849118199582378 2 16.3792879028878 19.66857833094267 38.47228694228301 25.479846823886522 3 18.897232085583763 24.185519096176343 29.34701004609938 27.570238772140517 4 13.529284718029851 15.924248495951037 34.50250588088349 36.04396090513563 5 14.336278925743489 37.1088047712352 32.77739179761803 15.77752450540329 6 33.44755608200361 34.27183322958317 16.773051236968623 15.5075594514446 7 29.70809305895707 32.18118720748323 19.28589317019069 18.82482656336901 8 26.9120563676019 33.331663779639726 20.236942192895896 19.519337659862476 9 27.866742038914715 15.626709617572576 18.691840477108933 37.81470786640377 10 16.958096203295764 27.96051797071112 31.133339014263257 23.94804681172986 11 35.54427665599566 23.206025031437292 20.972854961693013 20.27684335087403 12 24.326384895409138 25.59412136651167 27.49819805520066 22.581295682878533 13 29.19569570155615 21.564816224254418 24.574338398208752 24.665149675980675 14 23.52182322185191 21.663445330862956 24.896642936557143 29.91808851072799 15 25.546410141153647 27.886676367903696 22.284439662490623 24.282473828452034 16 24.48786385025402 27.350386753560425 23.985617764637297 24.176131631548266 17 23.835131162230173 27.292728016913497 24.825851254684363 24.046289566171968 18 23.63285036726674 26.299421611809787 26.386797915460335 23.680930105463133 19 24.830933274348375 25.874902007982488 26.694814636510607 22.599350081158533 20 25.741921759026443 25.008473622475236 25.846077379624145 23.403527238874183 21 26.059384889240505 24.89746419053964 25.499797010326446 23.543353909893405 22 25.08794777255353 24.35008417486515 26.40293610256063 24.159031950020683 23 25.03543935365385 24.81971306321574 25.660303955480757 24.484543627649657 24 24.904045568921955 25.128351249164062 25.81343336013552 24.154169821778467 25 24.1725247634758 24.826413851338103 26.455548613271496 24.5455127719146 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1770.0 1 1770.0 2 1795.0 3 1820.0 4 1820.0 5 1820.0 6 2295.0 7 2770.0 8 2770.0 9 2770.0 10 3435.5 11 4101.0 12 4101.0 13 4101.0 14 5387.5 15 6674.0 16 6674.0 17 6674.0 18 10618.5 19 14563.0 20 14563.0 21 14563.0 22 20928.0 23 27293.0 24 27293.0 25 27293.0 26 38150.5 27 49008.0 28 49008.0 29 49008.0 30 61663.5 31 74319.0 32 74319.0 33 74319.0 34 86730.0 35 99141.0 36 99141.0 37 99141.0 38 113666.5 39 128192.0 40 128192.0 41 128192.0 42 143932.0 43 159672.0 44 159672.0 45 159672.0 46 176351.0 47 193030.0 48 193030.0 49 193030.0 50 197938.5 51 202847.0 52 202847.0 53 202847.0 54 193162.0 55 183477.0 56 183477.0 57 183477.0 58 167938.0 59 152399.0 60 152399.0 61 152399.0 62 130980.5 63 109562.0 64 109562.0 65 109562.0 66 87065.5 67 64569.0 68 64569.0 69 64569.0 70 48789.5 71 33010.0 72 33010.0 73 33010.0 74 24054.0 75 15098.0 76 15098.0 77 15098.0 78 11724.5 79 8351.0 80 8351.0 81 8351.0 82 5980.0 83 3609.0 84 3609.0 85 3609.0 86 2573.0 87 1537.0 88 1537.0 89 1537.0 90 1007.5 91 478.0 92 478.0 93 478.0 94 270.5 95 63.0 96 63.0 97 63.0 98 33.5 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03629605875538343 2 0.05366352772973356 3 0.01580634816766698 4 0.011253079148174432 5 0.009431771540377415 6 6.504670027846492E-4 7 0.003382428414480176 8 0.0013009340055692984 9 0.006374576627289562 10 0.003252335013923246 11 0.011057939047339036 12 0.008391024335921975 13 0.006699810128681887 14 0.013659807058477634 15 0.006244483226732633 16 0.02998652882837233 17 0.03876783336596509 18 0.021270270991058028 19 0.015741301467388513 20 0.01522092786516079 21 0.02166055119272882 22 0.005268782722555659 23 0.014570460862376145 24 0.010992892347060572 25 0.47360502472750315 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1537357.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.51128239616964 #Duplication Level Percentage of deduplicated Percentage of total 1 71.84695445744629 31.98000079160131 2 10.904144563789197 9.707149159349578 3 5.336534461215691 7.126079772601878 4 3.142492214545465 5.595054335575908 5 2.0723214106834202 4.612084176327919 6 1.4374683015511025 3.839013450353007 7 1.0511105150148023 3.2750393874385026 8 0.7766327253002645 2.765513484315753 9 0.5739988201642405 2.299448122145883 >10 2.7036499356805503 19.880190937968084 >50 0.10482761142300795 3.165011108167576 >100 0.04569674463674502 3.7139267539340555 >500 0.002470067288420738 0.7301779600748437 >1k 0.0016981712607892572 1.3113105601457031 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4359 0.28353856651382864 No Hit TATCAACGCAGAGTACTTTTTTTTT 2542 0.16534871210785784 No Hit GGTATCAACGCAGAGTACTTTTTTT 2213 0.14394834771624287 No Hit GGTATCAACGCAGAGTACATGGGGG 1599 0.10400967374526542 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 6.504670027846492E-5 0.0 0.0 0.0 0.0 6 6.504670027846492E-5 0.0 0.0 0.0 0.0 7 6.504670027846492E-5 0.0 0.0 0.0 0.0 8 6.504670027846492E-5 0.0 0.0 0.0 0.0 9 6.504670027846492E-5 0.0 0.0 0.0 0.0 10 6.504670027846492E-5 0.0 0.0 0.0 0.0 11 6.504670027846492E-5 0.0 0.0 0.0 0.0 12 6.504670027846492E-5 0.0 0.0 0.0 0.0 13 6.504670027846492E-5 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGT 35 0.0021757775 16.279442 6 TACCGTC 45 6.782053E-4 14.772085 7 TCTACGC 40 0.005291438 14.244972 3 TAGGCCG 40 0.0052925805 14.24451 5 GCAACGC 55 1.9660035E-4 13.813309 3 GTATATA 100 1.0015356E-8 13.305264 1 ACGGTCC 50 0.0015038949 13.294876 8 GTATTAA 150 1.8189894E-12 12.671681 1 GTATTAT 115 5.29144E-9 12.396209 1 GTCTAGG 125 1.4006218E-9 12.164814 1 GTTATCA 260 0.0 12.062465 1 CGTCACT 105 2.7056558E-7 11.7665615 1 GTTCTAG 90 7.427496E-6 11.615707 1 TACTATA 75 2.0711802E-4 11.401543 2 GGTATCA 1730 0.0 11.206746 1 GTATAAA 145 1.209628E-9 11.14234 1 AGCAACG 60 0.0058696903 11.084834 2 ACTGCGC 60 0.0058924835 11.079063 8 CGCAGAA 95 1.3580162E-5 11.00149 2 ACCGTCC 95 1.3658766E-5 10.995762 8 >>END_MODULE