##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921143_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2815745 Sequences flagged as poor quality 0 Sequence length 125 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.647983393382567 31.0 31.0 34.0 27.0 34.0 2 30.767300305958102 31.0 31.0 34.0 27.0 34.0 3 30.87607755673898 31.0 31.0 34.0 27.0 34.0 4 34.38741967046022 37.0 35.0 37.0 30.0 37.0 5 34.01178089635248 37.0 35.0 37.0 30.0 37.0 6 33.87746617680223 37.0 35.0 37.0 29.0 37.0 7 33.700266181774275 37.0 35.0 37.0 28.0 37.0 8 33.6970716453372 37.0 35.0 37.0 28.0 37.0 9 35.12247913074515 39.0 35.0 39.0 28.0 39.0 10-11 35.082609753369 39.0 35.0 39.0 28.0 39.0 12-13 34.95667540917235 39.0 35.0 39.0 27.0 39.0 14-15 36.07603937856588 40.0 36.0 41.0 27.0 41.0 16-17 36.0194236338873 40.0 36.0 41.0 27.0 41.0 18-19 36.05673276521844 40.0 36.0 41.0 27.0 41.0 20-21 36.04905238222922 40.0 36.0 41.0 27.0 41.0 22-23 36.007347611378165 40.0 36.0 41.0 27.0 41.0 24-25 35.906918950402115 40.0 36.0 41.0 27.0 41.0 26-27 35.806739956920815 40.0 35.5 41.0 27.0 41.0 28-29 35.71466503536364 39.5 35.0 41.0 27.0 41.0 30-31 35.635843444630105 39.0 35.0 41.0 26.5 41.0 32-33 35.50302033742402 39.0 35.0 41.0 26.0 41.0 34-35 35.38422690975213 39.0 35.0 41.0 25.0 41.0 36-37 35.25469085446303 39.0 35.0 41.0 25.0 41.0 38-39 35.08592131034593 39.0 35.0 41.0 25.0 41.0 40-41 34.944603470839866 39.0 34.0 41.0 24.0 41.0 42-43 34.81208436843535 39.0 34.0 41.0 24.0 41.0 44-45 34.64212331017191 39.0 34.0 41.0 23.5 41.0 46-47 34.433981060074686 39.0 34.0 41.0 22.5 41.0 48-49 34.24199101836281 38.5 33.0 41.0 21.5 41.0 50-51 34.03017371956622 38.0 33.0 40.5 19.5 41.0 52-53 33.857474487213864 38.0 33.0 40.0 19.0 41.0 54-55 33.6474433941994 38.0 33.0 40.0 18.0 41.0 56-57 33.375689204810804 38.0 33.0 40.0 16.5 41.0 58-59 33.14972076661772 37.0 32.0 40.0 14.5 41.0 60-61 32.8747292457236 37.0 32.0 40.0 13.0 41.0 62-63 32.579386450122435 36.5 32.0 40.0 12.0 41.0 64-65 32.27969702512124 36.0 31.5 39.0 8.0 41.0 66-67 31.9344038611451 35.5 31.0 39.0 7.5 41.0 68-69 31.564807004895684 35.0 31.0 39.0 7.0 40.0 70-71 31.201841430953444 35.0 31.0 38.0 5.5 40.0 72-73 31.001013230956637 35.0 31.0 37.0 2.0 39.5 74-75 30.79975779056697 35.0 31.0 37.0 2.0 39.0 76-77 30.56243445340398 35.0 31.0 36.0 2.0 39.0 78-79 30.235337006724684 35.0 30.0 36.0 2.0 38.5 80-81 29.945572308571975 35.0 30.0 35.5 2.0 37.0 82-83 29.727335927081462 34.5 30.0 35.0 2.0 37.0 84-85 29.568926696131932 34.0 30.0 35.0 2.0 36.0 86-87 29.366252093140538 34.0 30.0 35.0 2.0 36.0 88-89 29.21825360606163 34.0 30.0 35.0 2.0 36.0 90-91 29.06861771928921 34.0 29.0 35.0 2.0 35.5 92-93 28.951603039337726 34.0 29.0 35.0 2.0 35.0 94-95 28.85070416532747 34.0 29.0 35.0 2.0 35.0 96-97 28.787318809054085 34.0 29.0 35.0 2.0 35.0 98-99 28.743978591811405 34.0 29.0 35.0 2.0 35.0 100-101 28.601685877094695 34.0 29.0 35.0 2.0 35.0 102-103 27.229392576387422 32.0 26.0 34.0 2.0 35.0 104-105 28.322499551628432 34.0 29.0 35.0 2.0 35.0 106-107 28.60811898804757 34.0 29.0 35.0 2.0 35.0 108-109 28.81111588584904 34.0 30.0 35.0 2.0 35.0 110-111 28.786662854768455 34.0 30.0 35.0 2.0 35.0 112-113 28.711943020408455 34.0 30.0 35.0 2.0 35.0 114-115 28.594058588402007 34.0 29.5 35.0 2.0 35.0 116-117 28.491280637983905 34.0 29.0 35.0 2.0 35.0 118-119 28.3541284810947 34.0 29.0 35.0 2.0 35.0 120-121 28.183136612157703 34.0 29.0 35.0 2.0 35.0 122-123 27.997597438688516 34.0 29.0 35.0 2.0 35.0 124-125 27.209596572132774 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67163.0 3 23086.0 4 11576.0 5 9333.0 6 10000.0 7 11849.0 8 13934.0 9 15072.0 10 16427.0 11 17439.0 12 18611.0 13 19511.0 14 21037.0 15 17799.0 16 13600.0 17 12510.0 18 11941.0 19 11513.0 20 11646.0 21 11972.0 22 12927.0 23 15775.0 24 21418.0 25 28188.0 26 35794.0 27 42474.0 28 50256.0 29 59957.0 30 70998.0 31 86316.0 32 105953.0 33 134000.0 34 176197.0 35 254045.0 36 443994.0 37 695018.0 38 236129.0 39 287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.940745221655405 19.37159041917785 13.597414538564584 25.090249820602157 2 16.256709599103893 20.43532397499487 37.51646990384773 25.791496522053514 3 18.932292610026373 24.040942787919597 29.512198240316735 27.514566361737298 4 13.488328072118025 16.64374076678062 35.52270340124049 34.34522775986086 5 14.257261906285052 37.062199419701436 34.089697496982645 14.590841177030867 6 33.26402647062793 35.65973053434952 16.81485833056887 14.261384664453677 7 28.58530645850479 31.65701312046397 20.92181036047444 18.835870060556807 8 26.613611872188287 34.50782715682799 19.782102637798378 19.09645833318534 9 26.317157961628233 15.447099313133092 19.358763192004112 38.87697953323456 10-11 25.44977307545716 25.641762925037288 27.483089441694936 21.42537455781061 12-13 26.00926998306169 23.03525254105769 27.525548221796875 23.429929254083746 14-15 23.376573320561395 24.623080679020493 24.84643567171949 27.153910328698622 16-17 23.321059755096822 27.430541493930704 25.782755889008484 23.465642861963985 18-19 23.367856045441386 26.564028056290194 27.370086907715834 22.698028990552583 20-21 24.280120532752637 25.750421180798238 27.001166073564765 22.968292212884357 22-23 23.818123331558873 25.621358604204957 26.820460325893215 23.74005773834296 24-25 23.575272274114973 25.81392713448057 27.02261532351401 23.588185267890445 26-27 23.35562745169435 25.9250963803955 27.024130400610296 23.695145767299845 28-29 23.309364836309012 25.975656608518356 27.19451356289639 23.52046499227624 30-31 23.73176265217809 25.89007564654985 26.88794438507005 23.49021731620201 32-33 23.507394954699574 25.864420206067646 26.80378459696742 23.82440024226536 34-35 23.508555361854462 26.040235555527925 26.994979658424946 23.456229424192664 36-37 23.783780423362654 25.73137297566131 26.828776582281293 23.65607001869474 38-39 23.618043411263052 25.851932049001313 26.931218575949284 23.598805963786347 40-41 23.64786494333621 25.842780850868063 26.971545011486935 23.53780919430879 42-43 23.79074070850564 25.684190969201413 26.81365358812377 23.711414734169175 44-45 23.698900391142953 25.7737289275088 26.730173887295912 23.79719679405234 46-47 23.740429337627127 25.76846390702392 26.633569189860808 23.857537565488155 48-49 23.658752973962343 25.93371538592018 26.583044928922412 23.824486711195064 50-51 23.547537986675554 26.157149726198238 26.48458569509448 23.810726592031727 52-53 23.748905189353618 25.959574555383874 26.3947456904292 23.896774564833308 54-55 23.734688233326626 25.941664435953427 26.30235611277894 24.02129121794101 56-57 23.699581311115043 26.01814294818645 26.186918689950684 24.095357050747822 58-59 23.50537715386326 25.943852666623563 26.51181609757241 24.038954081940762 60-61 23.53106466573002 26.152595989719412 26.448793345683768 23.86754599886679 62-63 23.332405537572974 26.21217226591704 26.40438052225724 24.051041674252744 64-65 23.350430988084103 26.071803755207725 26.368377841354178 24.209387415353998 66-67 23.437890232131164 26.19341978257309 26.204841427424952 24.163848557870793 68-69 23.64035498277325 25.8852055637864 26.27457256398729 24.19986688945306 70-71 23.431108392077952 25.77442706679087 26.43232414096434 24.362140400166837 72-73 23.502779855714323 25.83511583872023 26.329871000554427 24.332233305011023 74-75 23.423315572761567 25.90090290109864 26.2096732653958 24.466108260743997 76-77 23.374741009619363 25.734310768565166 26.37794604333029 24.513002178485177 78-79 23.409744278148533 25.857607235760778 26.289825439615733 24.442823046474956 80-81 23.31418385347877 25.856327036929414 26.245148391891288 24.584340717700528 82-83 23.312204248764775 25.71419893665431 26.37981128047297 24.593785534107948 84-85 23.251745177838973 25.726740804349156 26.201120146203323 24.820393871608548 86-87 23.17704332641807 25.67259570445945 26.296799044211944 24.853561924910537 88-89 23.268779040462793 25.58111118254736 26.182868822091653 24.96724095489819 90-91 23.037580850209057 25.708546030050044 26.32561663547332 24.92825648426758 92-93 23.11901427037373 25.597209794350746 26.3730878789741 24.910688056301424 94-95 23.000766714128233 25.545611143267205 26.445492344314143 25.008129798290422 96-97 23.1433507885391 25.38132200627592 26.404479814265812 25.07084739091917 98-99 22.911659032744463 25.460406317655227 26.275758937372238 25.35217571222807 100-101 22.814180305959432 25.44585413157126 26.39564797703928 25.344317585430034 102-103 22.752699286317487 25.23908852522486 26.521283935883126 25.486928252574526 104-105 22.689057869792745 25.370425460684114 26.339258518582326 25.601258150940815 106-107 22.57916821031342 25.461788660048313 26.35295383836127 25.606089291276994 108-109 22.518398251868597 25.46829895689664 26.355098426518346 25.65820436471642 110-111 22.48436904504393 25.494963960805666 26.345142993535216 25.675524000615184 112-113 22.358222923901625 25.530981977238238 26.325752295133935 25.7850428037262 114-115 22.293666091634975 25.60093297915075 26.269465035835594 25.835935893378682 116-117 22.19401345969975 25.53604738882677 26.332082644886405 25.93785650658707 118-119 22.22906505635127 25.495316713415185 26.203336947131117 26.072281283102434 120-121 22.03696107313903 25.579765348505596 26.303928201685927 26.079345376669455 122-123 21.964495074324653 25.51786451897727 26.210375013363276 26.30726539333481 124-125 21.828961070273 25.716408143743045 26.168034836676867 26.286595949307085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 52.0 1 63.5 2 110.0 3 166.5 4 145.0 5 113.5 6 177.0 7 360.5 8 571.5 9 632.5 10 510.5 11 379.0 12 386.0 13 441.5 14 504.0 15 609.0 16 668.5 17 748.0 18 860.5 19 981.5 20 1155.0 21 1390.0 22 1685.0 23 2089.0 24 2679.0 25 3420.0 26 4782.0 27 6664.0 28 8876.5 29 12114.5 30 16204.0 31 21222.0 32 27461.0 33 33124.5 34 38936.5 35 45936.0 36 53596.5 37 60892.5 38 67395.5 39 73292.5 40 78425.5 41 83157.5 42 87638.0 43 93466.5 44 98942.0 45 103511.5 46 108091.0 47 112118.5 48 116041.0 49 120142.5 50 124902.0 51 124731.5 52 119146.0 53 115080.5 54 112090.5 55 106581.0 56 99292.5 57 90082.0 58 81478.5 59 73774.0 60 63434.0 61 53025.5 62 42787.0 63 31452.5 64 22130.0 65 16343.5 66 12048.0 67 8919.5 68 6666.5 69 5000.5 70 3846.5 71 2788.5 72 2010.5 73 1613.5 74 1196.5 75 860.0 76 614.0 77 362.5 78 215.5 79 116.0 80 67.0 81 50.5 82 39.5 83 25.5 84 22.0 85 13.5 86 5.5 87 3.0 88 2.0 89 3.5 90 4.0 91 2.0 92 1.0 93 2.5 94 3.0 95 2.0 96 1.5 97 0.5 98 1.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.07692457946298405 2 1.0654373886839896E-4 3 3.9066037585079615E-4 4 0.18613191180309296 5 0.0717749654176781 6 0.008772101166831515 7 0.01321142361968147 8 0.010334742670234699 9 0.017686260652154225 10-11 0.017473173174417427 12-13 0.018804969910272414 14-15 0.025552740038604346 16-17 0.026813507615213734 18-19 0.02450505993973176 20-21 0.026369575369928736 22-23 0.02857147930654232 24-25 0.026671449296722535 26-27 0.025836856675586748 28-29 0.025943400414455146 30-31 0.026476119108797137 32-33 0.023084476754819772 34-35 0.024771419286902754 36-37 0.027790158554840728 38-39 0.032762199702032674 40-41 0.028695780335222118 42-43 0.027630342946538128 44-45 0.02803876061220032 46-47 0.02938831463786671 48-49 0.024416273490674757 50-51 0.029956547911831506 52-53 0.027008837803139132 54-55 0.031093014459761092 56-57 0.027239682570687332 58-59 0.02439851620086336 60-61 0.025925643124643745 62-63 0.02945934379711231 64-65 0.033170617367694874 66-67 0.03246032577523888 68-69 0.02810978977144592 70-71 0.036189356635632844 72-73 0.03979408646734701 74-75 0.02514432237294215 76-77 0.01726008569668063 78-79 0.021876981047644583 80-81 0.024824691156336953 82-83 0.023723739188030165 84-85 0.01731335756611483 86-87 0.016922697190264034 88-89 0.017473173174417427 90-91 0.018041406448382223 92-93 0.021734922729153387 94-95 0.01720681382724643 96-97 0.01914235841668901 98-99 0.01633670662648784 100-101 0.017846076260456825 102-103 0.014827336992518852 104-105 0.017846076260456825 106-107 0.015697444193277447 108-109 0.01406377353062866 110-111 0.012003927912506282 112-113 0.009855295845326902 114-115 0.008807615746454313 116-117 0.008132838733621119 118-119 0.005238400494362948 120-121 0.0028411663698239722 122-123 0.006818799287577533 124-125 0.05627285141232604 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2815745.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.487641129905526 #Duplication Level Percentage of deduplicated Percentage of total 1 69.11447517878146 34.203123445293 2 14.769402061853473 14.618057378805826 3 6.332802184383747 9.40186325542394 4 3.1754784851959963 6.2858775876446185 5 1.9116305017562836 4.730104212194809 6 1.1687795647518326 3.470408619624352 7 0.7633296985721745 2.644277033071711 8 0.5543156832029977 2.194542048242268 9 0.3807442403410273 1.6957920895447727 >10 1.7167092325998858 14.328920442194693 >50 0.07632180001643395 2.5751268129780125 >100 0.03406778091716442 2.8447226342360006 >500 0.00129572508510487 0.3893297051669158 >1k 6.47862542410151E-4 0.6178547355791484 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.130874777367979E-4 2 0.0 0.0 0.0 0.0 2.130874777367979E-4 3 0.0 0.0 0.0 0.0 2.130874777367979E-4 4 0.0 0.0 0.0 0.0 2.130874777367979E-4 5 0.0 0.0 0.0 0.0 2.4860205735959754E-4 6 0.0 0.0 0.0 0.0 2.4860205735959754E-4 7 0.0 0.0 0.0 0.0 2.4860205735959754E-4 8 0.0 0.0 0.0 0.0 2.4860205735959754E-4 9 0.0 0.0 0.0 0.0 2.4860205735959754E-4 10-11 0.0 0.0 0.0 0.0 3.373885064165967E-4 12-13 0.0 0.0 0.0 3.551457962279965E-5 0.0012785248664207874 14-15 0.0 0.0 0.0 3.551457962279965E-5 0.0015626415034031846 16-17 0.0 0.0 0.0 7.10291592455993E-5 0.001722457111705783 18-19 0.0 0.0 0.0 8.878644905699912E-5 0.0019355445894425807 20-21 0.0 0.0 0.0 1.9533018792539808E-4 0.0021841466468021783 22-23 0.0 0.0 0.0 3.9066037585079615E-4 0.002414991414350376 24-25 0.0 0.0 0.0 8.345926211357918E-4 0.002450505993973176 26-27 0.0 0.0 0.0 0.0019888164588767803 0.002645836181898574 28-29 0.0 0.0 0.0 0.0053094296536085476 0.002734622630955573 30-31 0.0 0.0 0.0 0.016798396161584232 0.002734622630955573 32-33 0.0 0.0 0.0 0.040504378059803 0.0028056517902011724 34-35 0.0 0.0 0.0 0.07482921926523886 0.0028766809494467716 36-37 0.0 0.0 0.0 0.12985906039076692 0.0028944382392581715 38-39 0.0 0.0 0.0 0.2120753122175481 0.0029477101086923707 40-41 0.0 0.0 0.0 0.3045552775553184 0.0029477101086923707 42-43 0.0 0.0 0.0 0.39288003707722113 0.0029832246883151705 44-45 0.0 0.0 0.0 0.4990863874392035 0.0031075257169949693 46-47 0.0 0.0 0.0 0.6251986596797651 0.003267341325297568 48-49 0.0 0.0 0.0 0.752838058844107 0.0034981860928457653 50-51 0.0 0.0 0.0 0.8835672264356325 0.003622487121525564 52-53 0.0 0.0 0.0 1.016338482355469 0.003729030860393963 54-55 0.0 0.0 0.0 1.164860454338017 0.0038000600196395626 56-57 0.0 0.0 0.0 1.3363958739161395 0.003906603758507961 58-59 0.0 0.0 0.0 1.516117404097317 0.003977632917753561 60-61 0.0 0.0 0.0 1.6967623133486875 0.00404866207699916 62-63 0.0 0.0 0.0 1.8818643023427193 0.004332778713981558 64-65 1.7757289811399826E-5 0.0 0.0 2.0862151934923086 0.004368293293604357 66-67 3.551457962279965E-5 0.0 0.0 2.326027392395263 0.004457079742661356 68-69 7.10291592455993E-5 0.0 0.0 2.59517463406665 0.004510351612095556 70-71 7.10291592455993E-5 0.0 0.0 2.877178153561491 0.004599138061152554 72-73 7.10291592455993E-5 0.0 0.0 3.164970549534848 0.004829982828700752 74-75 7.10291592455993E-5 0.0 0.0 3.4694015260614863 0.00500755572681475 76-77 7.10291592455993E-5 0.0 0.0 3.8167696293520894 0.00504307030643755 78-79 7.10291592455993E-5 0.0 0.0 4.194982145045095 0.00511409946568315 80-81 7.10291592455993E-5 0.0 0.0 4.591058494288368 0.005202885914740149 82-83 7.10291592455993E-5 0.0 0.0 5.004217356330208 0.005433730682288347 84-85 7.10291592455993E-5 0.0 0.0 5.43072970031022 0.005451487972099746 86-87 7.10291592455993E-5 0.0 0.0 5.898101568146263 0.005735604609082143 88-89 7.10291592455993E-5 0.0 0.0 6.406457260867017 0.006001963956253141 90-91 7.10291592455993E-5 0.0 0.0 6.934789904625596 0.0060729931154987395 92-93 7.10291592455993E-5 0.0 0.0 7.486171510559372 0.0064281389117267365 94-95 7.10291592455993E-5 0.0 0.0 8.044638275127898 0.0064458962015381364 96-97 7.10291592455993E-5 0.0 0.0 8.641585086717726 0.0073870325615423265 98-99 7.10291592455993E-5 0.0 0.0 9.292212185407415 0.007990780415129921 100-101 7.10291592455993E-5 0.0 0.0 9.980928670742557 0.007990780415129921 102-103 7.10291592455993E-5 0.0 0.0 10.676925644900372 0.00807956686418692 104-105 1.0654373886839895E-4 0.0 0.0 11.374929192806878 0.00813283873362112 106-107 1.0654373886839895E-4 0.0 0.0 12.099355587952743 0.00813283873362112 108-109 1.0654373886839895E-4 0.0 0.0 12.863380739378034 0.00816835331324392 110-111 1.0654373886839895E-4 0.0 0.0 13.663488703700086 0.00820386789286672 112-113 1.0654373886839895E-4 0.0 0.0 14.479773559040325 0.00820386789286672 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9135 0.0 31.542316 1 GGTATCA 6735 0.0 31.090275 1 TCAACGC 11110 0.0 25.768517 4 CAACGCA 11105 0.0 25.731087 5 ATCAACG 11235 0.0 25.375643 3 TATCAAC 11465 0.0 24.917269 2 AACGCAG 11590 0.0 24.791676 6 CATGGGG 7495 0.0 24.589462 4 GTACATG 13395 0.0 24.049501 1 ACATGGG 13335 0.0 23.21328 3 TACATGG 13530 0.0 23.141981 2 CTATACG 130 0.002024369 22.939758 4 ACGCAGA 13125 0.0 21.575336 7 CGCAGAG 13385 0.0 21.156994 8 GAGTACT 5985 0.0 19.383835 12-13 GTACTTT 6000 0.0 19.137403 14-15 GCAGAGT 14595 0.0 19.07721 9 AGTACTT 6455 0.0 18.66371 12-13 GTATATA 1125 0.0 18.029406 1 CGTTATT 305 3.4709174E-6 17.598745 2 >>END_MODULE